BLASTX nr result

ID: Glycyrrhiza23_contig00014137 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014137
         (969 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526389.1| PREDICTED: LOW QUALITY PROTEIN: auxin-respon...   256   2e-75
ref|XP_003603373.1| Auxin-responsive protein IAA10 [Medicago tru...   278   1e-72
ref|NP_001242688.1| uncharacterized protein LOC100802759 [Glycin...   263   2e-68
ref|XP_002309635.1| predicted protein [Populus trichocarpa] gi|2...   226   8e-57
ref|XP_002282711.2| PREDICTED: probable LRR receptor-like serine...   182   8e-44

>ref|XP_003526389.1| PREDICTED: LOW QUALITY PROTEIN: auxin-responsive protein IAA29-like
           [Glycine max]
          Length = 224

 Score =  256 bits (655), Expect(2) = 2e-75
 Identities = 139/207 (67%), Positives = 160/207 (77%), Gaps = 2/207 (0%)
 Frame = -3

Query: 889 MELQLGLALPTHNPIEGFDPNSPGLIKSKQIQIQSLESWTPSCCYENKKHV-NNKRSFEE 713
           MEL+ GLALPTHN +E F  N     KSKQI   SLE W PSC  +++K V +NKRSFEE
Sbjct: 1   MELESGLALPTHNSVEEFKLN-----KSKQIV--SLELWRPSCGSDSEKRVKHNKRSFEE 53

Query: 712 SFGNLIKKPLPLLVWSGQPNEEDDSSGNMHRHFHTSNKNNEEENHLVGWPPIKSWRKKEL 533
           SFG  +K P PLLVWSGQPNEE+D +  + R+ HT NKN +EENHLVGWPP+KSWR+KEL
Sbjct: 54  SFGQFLK-PFPLLVWSGQPNEEEDRNEKVQRNIHTPNKNGDEENHLVGWPPVKSWRRKEL 112

Query: 532 H-QQHPAGGHIRNDGMQQDNIENQSRGGYSKPLYVKVNMEGVAIGRQINLRLYNSYQTLT 356
           H QQ+PA G IRND +Q +  ENQSR   S  LYVKVNMEGVAIGR+INLRL+NSYQTLT
Sbjct: 113 HRQQYPARGQIRNDRIQAN--ENQSRRPNS--LYVKVNMEGVAIGRKINLRLFNSYQTLT 168

Query: 355 DSLISMFVKYQEFEEAGASYTLTFQNK 275
            SLISMF KYQ+FEE G SYTL FQN+
Sbjct: 169 SSLISMFAKYQKFEEVGESYTLNFQNE 195



 Score = 53.5 bits (127), Expect(2) = 2e-75
 Identities = 23/28 (82%), Positives = 24/28 (85%)
 Frame = -2

Query: 272 RGLVAHWTCSMAILHWYGAAFGDTQEWK 189
           RGL A  TCSMAILHWY AAFGDT+EWK
Sbjct: 197 RGLAASRTCSMAILHWYCAAFGDTEEWK 224


>ref|XP_003603373.1| Auxin-responsive protein IAA10 [Medicago truncatula]
           gi|355492421|gb|AES73624.1| Auxin-responsive protein
           IAA10 [Medicago truncatula]
          Length = 213

 Score =  278 bits (712), Expect = 1e-72
 Identities = 155/234 (66%), Positives = 169/234 (72%)
 Frame = -3

Query: 889 MELQLGLALPTHNPIEGFDPNSPGLIKSKQIQIQSLESWTPSCCYENKKHVNNKRSFEES 710
           MELQ GLALP H+ IEGFDP +  L  +  I+             EN K+V NKRSF+ES
Sbjct: 1   MELQSGLALPIHSSIEGFDPYNSDL--NNHIRGS-----------ENIKYVKNKRSFDES 47

Query: 709 FGNLIKKPLPLLVWSGQPNEEDDSSGNMHRHFHTSNKNNEEENHLVGWPPIKSWRKKELH 530
           FG+   KPLPLLVWSGQPNEED  S   +R  HTSN  NE ENHLVGWPPIKSWRKKE H
Sbjct: 48  FGDF-SKPLPLLVWSGQPNEEDGRSEKKNRSIHTSN--NEGENHLVGWPPIKSWRKKEFH 104

Query: 529 QQHPAGGHIRNDGMQQDNIENQSRGGYSKPLYVKVNMEGVAIGRQINLRLYNSYQTLTDS 350
            Q     HIR         ENQ+R   SKPLYVKVNMEGV +GRQINLRLYNSYQTL DS
Sbjct: 105 DQQ-LPEHIRKAN------ENQNRR--SKPLYVKVNMEGVGMGRQINLRLYNSYQTLKDS 155

Query: 349 LISMFVKYQEFEEAGASYTLTFQNKQGDWLLTGHVPWQSFIGTVRRLAILRNGK 188
           LISMFVK Q FEE GA+YTLTFQNKQG+W LT H+ WQSFIGTVRRLAILRNG+
Sbjct: 156 LISMFVKCQNFEETGANYTLTFQNKQGEWKLTSHITWQSFIGTVRRLAILRNGE 209


>ref|NP_001242688.1| uncharacterized protein LOC100802759 [Glycine max]
           gi|255644559|gb|ACU22782.1| unknown [Glycine max]
          Length = 210

 Score =  263 bits (673), Expect(2) = 2e-68
 Identities = 142/207 (68%), Positives = 161/207 (77%), Gaps = 1/207 (0%)
 Frame = -3

Query: 889 MELQLGLALPTHNPIEGFDPNSPGLIKSKQIQIQSLESWTPSCCYENKKHV-NNKRSFEE 713
           ME+ L LALPT N +E F  N     KSKQI   SL+ W  SC  E++K V +NKRSFEE
Sbjct: 1   MEVDLVLALPTQNSVEEFKLN-----KSKQIV--SLQLWRASCGSESEKRVKHNKRSFEE 53

Query: 712 SFGNLIKKPLPLLVWSGQPNEEDDSSGNMHRHFHTSNKNNEEENHLVGWPPIKSWRKKEL 533
           SFG+ +K PLPLLVWSGQPNEEDD S  + R+ H  NKN +EENHLVGWPP+KSWR+KEL
Sbjct: 54  SFGHFLK-PLPLLVWSGQPNEEDDRSEKVQRNIHIPNKNGDEENHLVGWPPVKSWRRKEL 112

Query: 532 HQQHPAGGHIRNDGMQQDNIENQSRGGYSKPLYVKVNMEGVAIGRQINLRLYNSYQTLTD 353
           HQQHPA G IRND +Q +  ENQSRG  S  LYVKVNMEGVAIGR+INLRL+NSYQTLT 
Sbjct: 113 HQQHPARGRIRNDRIQAN--ENQSRGPNS--LYVKVNMEGVAIGRKINLRLFNSYQTLTS 168

Query: 352 SLISMFVKYQEFEEAGASYTLTFQNKQ 272
           SLISMF KYQ+FEE G SYTLTFQN+Q
Sbjct: 169 SLISMFAKYQKFEEVGESYTLTFQNEQ 195



 Score = 23.1 bits (48), Expect(2) = 2e-68
 Identities = 10/14 (71%), Positives = 11/14 (78%)
 Frame = -2

Query: 272 RGLVAHWTCSMAIL 231
           RG+ A  TCSMAIL
Sbjct: 196 RGMAASRTCSMAIL 209


>ref|XP_002309635.1| predicted protein [Populus trichocarpa] gi|222855611|gb|EEE93158.1|
           predicted protein [Populus trichocarpa]
          Length = 229

 Score =  226 bits (575), Expect = 8e-57
 Identities = 126/235 (53%), Positives = 161/235 (68%), Gaps = 3/235 (1%)
 Frame = -3

Query: 889 MELQLGLALPTHNPIEGFDPNSPGLIKSKQIQIQSLESWTPSCCYENKKHVNNKRSFEES 710
           MELQLGL+LPT+N IE FD N+ G     + Q+   + W  SC  E+  +++NKRSFE +
Sbjct: 1   MELQLGLSLPTYNFIENFDLNNGGF--EPKDQMLGSKPWI-SC--EDGNYLDNKRSFEVA 55

Query: 709 FGNLIK---KPLPLLVWSGQPNEEDDSSGNMHRHFHTSNKNNEEENHLVGWPPIKSWRKK 539
           F   IK   + LPLL+WSGQPN+EDD +G   +   + NK++EEEN +VGWPPIKSWRKK
Sbjct: 56  FEKNIKDASQELPLLLWSGQPNDEDDWNGEK-KISRSINKDDEEENQVVGWPPIKSWRKK 114

Query: 538 ELHQQHPAGGHIRNDGMQQDNIENQSRGGYSKPLYVKVNMEGVAIGRQINLRLYNSYQTL 359
            LH QH AG  + +  M          G  SK  YVKV MEGVAI R+I+LRLYNSYQTL
Sbjct: 115 VLHHQHQAGHVVNSTRMATAGNYEYGTGSNSK--YVKVKMEGVAITRKIDLRLYNSYQTL 172

Query: 358 TDSLISMFVKYQEFEEAGASYTLTFQNKQGDWLLTGHVPWQSFIGTVRRLAILRN 194
           T SLISMF K +  E+  A Y+LT+Q+K GDWL+ G VPWQ+F+ +V+RL I+RN
Sbjct: 173 TKSLISMFAKCKNLEKDAARYSLTYQDKDGDWLIAGDVPWQTFMESVQRLKIVRN 227


>ref|XP_002282711.2| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g56130-like [Vitis vinifera]
          Length = 889

 Score =  182 bits (463), Expect = 8e-44
 Identities = 107/241 (44%), Positives = 146/241 (60%), Gaps = 8/241 (3%)
 Frame = -3

Query: 889 MELQLGLALPTHNP-IEGFDPNSPGLIKSKQIQIQSLESWTPSCCYENKKHVNNKRSFEE 713
           MELQLGLALP + P ++  +    G    +++  Q    W+  C    + ++ NKR F E
Sbjct: 1   MELQLGLALPAYTPAVKVVELKGCGNEAKQKLGSQP---WSFGC----ESYMKNKRGFGE 53

Query: 712 SFGNLIKKP-------LPLLVWSGQPNEEDDSSGNMHRHFHTSNKNNEEENHLVGWPPIK 554
           +F  +           LPLL+W GQPN+EDD +G   R     NKN EE N +VGWPP+K
Sbjct: 54  AFEKIEDHDHVSDGTSLPLLLWHGQPNDEDDHNGLGKRASCPINKNGEEGNAVVGWPPVK 113

Query: 553 SWRKKELHQQHPAGGHIRNDGMQQDNIENQSRGGYSKPLYVKVNMEGVAIGRQINLRLYN 374
           SWRKK + Q    GG      M  D    +  GG + P+YVKV MEGVAI R+INL+LY 
Sbjct: 114 SWRKKVICQHQ--GGR-----MVFDRTAEKESGG-AGPIYVKVKMEGVAIARKINLKLYQ 165

Query: 373 SYQTLTDSLISMFVKYQEFEEAGASYTLTFQNKQGDWLLTGHVPWQSFIGTVRRLAILRN 194
           SYQ L +SL +MF + ++ +     YTLT+Q+K+GDWLL G VPW++FI +V+RL ++RN
Sbjct: 166 SYQMLKNSLTAMFARCKKCDVDCVHYTLTYQDKEGDWLLAGDVPWRTFIESVQRLELVRN 225

Query: 193 G 191
           G
Sbjct: 226 G 226


Top