BLASTX nr result

ID: Glycyrrhiza23_contig00014114 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014114
         (713 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glyc...   247   2e-63
ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glyc...   242   5e-62
ref|XP_003590983.1| Eukaryotic translation initiation factor 3 s...   236   3e-60
ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257...   180   2e-43
emb|CBI38027.3| unnamed protein product [Vitis vinifera]              172   8e-41

>ref|XP_003541606.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 956

 Score =  247 bits (630), Expect = 2e-63
 Identities = 127/178 (71%), Positives = 144/178 (80%)
 Frame = +1

Query: 178 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 357
           MGKKNK+KEN G  K+HC STLFVSNLPYSFSNSQLEETFS+VGPVRRCFMVTQKGSAQH
Sbjct: 1   MGKKNKVKENGG--KEHCPSTLFVSNLPYSFSNSQLEETFSQVGPVRRCFMVTQKGSAQH 58

Query: 358 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXXKSKPNQVGKTDDFTE 537
           RGFGYVQFAVEEDANRAIELKNG+SV GRKI VKHAM        +SKPNQ GKTDD T+
Sbjct: 59  RGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPREERQSKPNQAGKTDDLTK 118

Query: 538 SKNDDKDSRLTGAXXXXXXXXXXXXXXLNKQKNSRKPVEIKKAALCNDVADEGGGSEK 711
            K+DD+D R +G+              ++KQK++RKP+EIKK+ALC+DVADEGG SEK
Sbjct: 119 PKDDDEDGRSSGS-EKNVSVSKEEELQVSKQKSTRKPMEIKKSALCDDVADEGGCSEK 175


>ref|XP_003539635.1| PREDICTED: RNA-binding protein 28-like [Glycine max]
          Length = 958

 Score =  242 bits (618), Expect = 5e-62
 Identities = 126/178 (70%), Positives = 141/178 (79%)
 Frame = +1

Query: 178 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 357
           MGKKNK+KEN G  K+HC+STLFVSNLPYSFSNSQLEETFSEVGPVRRCF+VTQKGSAQH
Sbjct: 1   MGKKNKVKENGG--KEHCSSTLFVSNLPYSFSNSQLEETFSEVGPVRRCFIVTQKGSAQH 58

Query: 358 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXXKSKPNQVGKTDDFTE 537
           RGFGYVQFAVEEDANRAIELKNG+SV GRKI VKHAM        +SKPN+ GKTDD T+
Sbjct: 59  RGFGYVQFAVEEDANRAIELKNGTSVEGRKIVVKHAMPRPPCEERQSKPNKEGKTDDLTK 118

Query: 538 SKNDDKDSRLTGAXXXXXXXXXXXXXXLNKQKNSRKPVEIKKAALCNDVADEGGGSEK 711
            K+DD+DS L+GA              ++KQKN RKP E KK+ALC+DV DEG  SEK
Sbjct: 119 PKDDDEDSTLSGA-EKNVSVLKEEEVQVSKQKNMRKPTETKKSALCDDVPDEGSCSEK 175


>ref|XP_003590983.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
           truncatula] gi|355480031|gb|AES61234.1| Eukaryotic
           translation initiation factor 3 subunit G [Medicago
           truncatula]
          Length = 962

 Score =  236 bits (602), Expect = 3e-60
 Identities = 129/183 (70%), Positives = 139/183 (75%), Gaps = 5/183 (2%)
 Frame = +1

Query: 178 MGKKNK-LKEN-DGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSA 351
           MGKKNK +KEN DGT KQ C  TLFVSNLPYSF+NSQLE+TFSEVGPVRRCFMVTQKGS 
Sbjct: 1   MGKKNKAMKENSDGTVKQ-CPLTLFVSNLPYSFTNSQLEQTFSEVGPVRRCFMVTQKGST 59

Query: 352 QHRGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXXKSKPNQVGKTDDF 531
           QHRGFGYVQFAVE+DAN+AIELKN S VG RKI VKHA+        +SKP+Q G   D 
Sbjct: 60  QHRGFGYVQFAVEKDANQAIELKNSSLVGDRKIVVKHAIPRPPRENRRSKPDQEGNEGDL 119

Query: 532 TESKNDDKDSRLTGA---XXXXXXXXXXXXXXLNKQKNSRKPVEIKKAALCNDVADEGGG 702
           TESKNDDKDS L+GA                 L+K KNSRKPVEIKKAALCND ADEGGG
Sbjct: 120 TESKNDDKDSELSGAEKPVSVPKEPKEEEVKVLDKPKNSRKPVEIKKAALCNDAADEGGG 179

Query: 703 SEK 711
           SEK
Sbjct: 180 SEK 182


>ref|XP_002274081.1| PREDICTED: uncharacterized protein LOC100257200 [Vitis vinifera]
          Length = 972

 Score =  180 bits (457), Expect = 2e-43
 Identities = 100/183 (54%), Positives = 120/183 (65%), Gaps = 5/183 (2%)
 Frame = +1

Query: 178 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 357
           MGKKNK  E  G   QHC ST+FVSN PYSF+NSQLEETFS+VGP+RRCFMVTQKGS +H
Sbjct: 1   MGKKNKT-EGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEH 59

Query: 358 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXXKSKPNQVGKTDDFTE 537
           RGFG+VQFAV+EDANRAIELKNGSS+GGRKI VK AM        +SK NQ   +DD  +
Sbjct: 60  RGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQAVHSDDIIK 119

Query: 538 SKND-DKDSRLTGAXXXXXXXXXXXXXXLNKQ---KNSRKPVEIKKAAL-CNDVADEGGG 702
           ++ + D  S +                 +      KN+ K VE++KA   C D AD+G  
Sbjct: 120 TRTEKDSSSEVVKQGHASDLQEIGSMSLIFSSITFKNTEKHVELRKALKPCTDQADKGSF 179

Query: 703 SEK 711
           SEK
Sbjct: 180 SEK 182


>emb|CBI38027.3| unnamed protein product [Vitis vinifera]
          Length = 918

 Score =  172 bits (435), Expect = 8e-41
 Identities = 99/179 (55%), Positives = 117/179 (65%), Gaps = 1/179 (0%)
 Frame = +1

Query: 178 MGKKNKLKENDGTAKQHCASTLFVSNLPYSFSNSQLEETFSEVGPVRRCFMVTQKGSAQH 357
           MGKKNK  E  G   QHC ST+FVSN PYSF+NSQLEETFS+VGP+RRCFMVTQKGS +H
Sbjct: 1   MGKKNKT-EGGGARDQHCPSTVFVSNFPYSFTNSQLEETFSDVGPIRRCFMVTQKGSTEH 59

Query: 358 RGFGYVQFAVEEDANRAIELKNGSSVGGRKIAVKHAMXXXXXXXXKSKPNQVGKTDDFTE 537
           RGFG+VQFAV+EDANRAIELKNGSS+GGRKI VK AM        +SK NQ    DD  +
Sbjct: 60  RGFGFVQFAVKEDANRAIELKNGSSIGGRKIGVKLAMHRTPLEQRRSKENQ----DDIIK 115

Query: 538 SKNDDKDSRLTGAXXXXXXXXXXXXXXLNKQKNSRKPVEIKKAAL-CNDVADEGGGSEK 711
           ++  +KDS                    +  +   K VE++KA   C D AD+G  SEK
Sbjct: 116 TRT-EKDS----------SSEVVKQGHASDLQEIEKHVELRKALKPCTDQADKGSFSEK 163


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