BLASTX nr result

ID: Glycyrrhiza23_contig00014068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014068
         (1501 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF45348.1| nucleoporin [Lotus japonicus]                         803   0.0  
ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup8...   756   0.0  
ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago...   752   0.0  
ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup8...   707   0.0  
ref|XP_002516506.1| conserved hypothetical protein [Ricinus comm...   645   0.0  

>dbj|BAF45348.1| nucleoporin [Lotus japonicus]
          Length = 711

 Score =  803 bits (2073), Expect = 0.0
 Identities = 400/484 (82%), Positives = 426/484 (88%), Gaps = 2/484 (0%)
 Frame = -2

Query: 1449 DSLVVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSG-SPDAP-EGAKVVEVKLSDGD 1276
            DS+ VYPL+HGL  P+SRVAISWSRGNSLRVSLFAEPS  SPD+   GAKVVEVKLS  D
Sbjct: 20   DSVAVYPLNHGLSLPISRVAISWSRGNSLRVSLFAEPSATSPDSQASGAKVVEVKLSGED 79

Query: 1275 PEITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXPYHLDWWEHVLQYSKDIXXXXXX 1096
            PEI+D+NWRRIAYGSV PF                  PYH+DWWEHVL+YSKDI      
Sbjct: 80   PEISDSNWRRIAYGSVTPFALLQSRRSSLAALSKSPSPYHVDWWEHVLEYSKDIASLLGG 139

Query: 1095 XXXXXXPIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLADYDSLF 916
                  PIIED +AI  + EEPTCLKAAWEL+E+FYVDK+SQAWLPERLVDWLAD+DSLF
Sbjct: 140  PKLSPGPIIEDPNAIATKCEEPTCLKAAWELLEMFYVDKRSQAWLPERLVDWLADFDSLF 199

Query: 915  TSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWLDIVVKMLRLHGSYQLDQ 736
            TST ETIHGKLV+FQK+LVNIQVIEDDPRYWE MSSALSVGWLDIVVKMLRLHGSYQLDQ
Sbjct: 200  TSTHETIHGKLVNFQKELVNIQVIEDDPRYWEVMSSALSVGWLDIVVKMLRLHGSYQLDQ 259

Query: 735  LSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDFIKAWEKWRSQITKLDCS 556
            LS RE ENGLVE VAVLISKMPRLRPES+V  LGECFKSKPDFIKAWEKWRSQITKLDCS
Sbjct: 260  LSSRERENGLVEVVAVLISKMPRLRPESAVENLGECFKSKPDFIKAWEKWRSQITKLDCS 319

Query: 555  PFWIQCDNEQTREGLRNLLQIMLGNTEILCTATCYWIELYVSHFLYIRPFTTGIESMHNL 376
            PFWIQCDN+QT +GLRNLLQIMLGNTE LCTATC+WIELYVSHFLYIRPFTTGIESM+NL
Sbjct: 320  PFWIQCDNQQTCDGLRNLLQIMLGNTESLCTATCHWIELYVSHFLYIRPFTTGIESMYNL 379

Query: 375  AQKCIQLKPPSATHRLTGLMIGILGENTEVVLAECSREFGPWMVAHALELLTAGSEQAEI 196
            AQKC+QLKPPS+ H+LTGLMIGILGENTEVVLAECSREFGPWMVAHA+ELLTAGSEQAE+
Sbjct: 380  AQKCMQLKPPSSIHKLTGLMIGILGENTEVVLAECSREFGPWMVAHAVELLTAGSEQAEV 439

Query: 195  LLHDERYNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLCRQSV 16
            LLHDE YNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLL RQSV
Sbjct: 440  LLHDEHYNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSV 499

Query: 15   QRND 4
            Q ND
Sbjct: 500  QHND 503


>ref|XP_003550123.1| PREDICTED: nuclear pore complex protein Nup85-like [Glycine max]
          Length = 698

 Score =  756 bits (1952), Expect = 0.0
 Identities = 380/479 (79%), Positives = 410/479 (85%)
 Frame = -2

Query: 1437 VYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSGSPDAPEGAKVVEVKLSDGDPEITDA 1258
            VYPLHHGL  P+SR++ISW+RG+SLR+SLFA  +        AKVVEVKL+  D EI DA
Sbjct: 22   VYPLHHGLAPPISRLSISWARGSSLRLSLFAGAA--------AKVVEVKLAGEDSEIPDA 73

Query: 1257 NWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXPYHLDWWEHVLQYSKDIXXXXXXXXXXXX 1078
            +WRRIAYGSVAPF                  PY  DWWEHVLQYSK+I            
Sbjct: 74   HWRRIAYGSVAPFALLQSRRSSLSALLKTPSPYRSDWWEHVLQYSKEIGSLLGGPKLPAS 133

Query: 1077 PIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLADYDSLFTSTQET 898
            PIIED + I KR EEPT LKAAWEL+EIFYVDKQSQAWLPERLVDWLADY SLFTST ET
Sbjct: 134  PIIEDPNVIAKRGEEPTSLKAAWELIEIFYVDKQSQAWLPERLVDWLADYASLFTSTHET 193

Query: 897  IHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWLDIVVKMLRLHGSYQLDQLSKREI 718
            IHGKLVDFQK+LVNIQVIE+DPRYW+ +SSALSVGWLDIVVKMLRLHGSYQLDQLS RE+
Sbjct: 194  IHGKLVDFQKELVNIQVIEEDPRYWDLLSSALSVGWLDIVVKMLRLHGSYQLDQLSNREL 253

Query: 717  ENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDFIKAWEKWRSQITKLDCSPFWIQC 538
            ENGLVEAVAVLISKMPR+RPES VG+LGEC+KSKPDFIKAWEKWRSQITKLDCS FWIQC
Sbjct: 254  ENGLVEAVAVLISKMPRMRPES-VGKLGECYKSKPDFIKAWEKWRSQITKLDCSRFWIQC 312

Query: 537  DNEQTREGLRNLLQIMLGNTEILCTATCYWIELYVSHFLYIRPFTTGIESMHNLAQKCIQ 358
            DN+QTREGLRNLLQIMLGNTE LC ATCYWIELY+SHFLYIRPFT GIESM+NLAQKCIQ
Sbjct: 313  DNQQTREGLRNLLQIMLGNTESLCMATCYWIELYISHFLYIRPFTMGIESMYNLAQKCIQ 372

Query: 357  LKPPSATHRLTGLMIGILGENTEVVLAECSREFGPWMVAHALELLTAGSEQAEILLHDER 178
            LKP S+THRL+ LMIGIL ENTEVVLAECSREFGPW+VAHA+ELLTAGSEQAEILLH+ER
Sbjct: 373  LKPRSSTHRLSVLMIGILEENTEVVLAECSREFGPWLVAHAIELLTAGSEQAEILLHEER 432

Query: 177  YNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLCRQSVQRNDM 1
            YNLGGISIVELHRL YAQ+LSSHALTWQIAPIYLTSCMKQGMGLLENLL RQS Q ND+
Sbjct: 433  YNLGGISIVELHRLVYAQILSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSAQHNDV 491


>ref|XP_003588386.1| Nuclear pore complex protein Nup85 [Medicago truncatula]
            gi|355477434|gb|AES58637.1| Nuclear pore complex protein
            Nup85 [Medicago truncatula]
          Length = 919

 Score =  752 bits (1941), Expect = 0.0
 Identities = 387/530 (73%), Positives = 414/530 (78%), Gaps = 47/530 (8%)
 Frame = -2

Query: 1449 DSLVVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSGSPDAPEGAKVVEVKLSDGDPE 1270
            DSL +YPLHH L RPVSR+AISWSRGNSLRVSLFAEPS + DA +GAKV+EVKL  GDPE
Sbjct: 21   DSLAIYPLHHTLTRPVSRLAISWSRGNSLRVSLFAEPSQTSDAGDGAKVIEVKLGGGDPE 80

Query: 1269 ITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXPYHLD-------------------- 1150
            I DA+WRRIAYGSVAPF                   Y LD                    
Sbjct: 81   IDDADWRRIAYGSVAPFALLQSRRSAISNMSKSPSTYQLDCTNKNTEHYTDTWTQKDIDI 140

Query: 1149 -------------W--------------WEHVLQYSKDIXXXXXXXXXXXXPIIEDLSAI 1051
                         W              WEHVLQYSK+I            PII+D + I
Sbjct: 141  NELDKYMMYDRTLWRHLIHVACPTSGIKWEHVLQYSKEITSLLAGPKLGPSPIIDDPNEI 200

Query: 1050 VKRSEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLADYDSLFTSTQETIHGKLVDFQ 871
            VK++EEPTCLKAAWELMEIFYVDKQ  +           DYDSLFTSTQETIHGKLVDFQ
Sbjct: 201  VKKNEEPTCLKAAWELMEIFYVDKQISSM----------DYDSLFTSTQETIHGKLVDFQ 250

Query: 870  KDLVNIQVIEDDPRYWEAMSSALSVGWLDIVVKMLRLHGSYQLDQLSKREIENGLVEAVA 691
             DLVNIQVIEDDPRYWE MSSALSVGWLDIVVKMLRLHGSYQLDQLS RE+ENGLVEAVA
Sbjct: 251  NDLVNIQVIEDDPRYWEVMSSALSVGWLDIVVKMLRLHGSYQLDQLSNRELENGLVEAVA 310

Query: 690  VLISKMPRLRPESSVGQLGECFKSKPDFIKAWEKWRSQITKLDCSPFWIQCDNEQTREGL 511
            VLISKMPRLRPES+ G LGECFKSKPDFIKAWEKWRSQITKLDCSPFWIQCDN+QTR GL
Sbjct: 311  VLISKMPRLRPESAAGNLGECFKSKPDFIKAWEKWRSQITKLDCSPFWIQCDNQQTRVGL 370

Query: 510  RNLLQIMLGNTEILCTATCYWIELYVSHFLYIRPFTTGIESMHNLAQKCIQLKPPSATHR 331
            RNLLQ+MLGNTE LCTA+CYW+ELY+SHFLYIRPF  G+ESM+NLAQKCIQLKPP+ THR
Sbjct: 371  RNLLQVMLGNTESLCTASCYWVELYISHFLYIRPFMIGVESMYNLAQKCIQLKPPTGTHR 430

Query: 330  LTGLMIGILGENTEVVLAECSREFGPWMVAHALELLTAGSEQAEILLHDERYNLGGISIV 151
            LTGL+IGILGENTEVVLAE SREFGPWMVAHA+ELLTAGSEQAEILL+DERYNLGGIS+V
Sbjct: 431  LTGLLIGILGENTEVVLAEISREFGPWMVAHAVELLTAGSEQAEILLYDERYNLGGISMV 490

Query: 150  ELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLCRQSVQRNDM 1
            ELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLL RQSVQ N+M
Sbjct: 491  ELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLYRQSVQHNNM 540


>ref|XP_002283798.1| PREDICTED: nuclear pore complex protein Nup85 [Vitis vinifera]
            gi|296081842|emb|CBI20847.3| unnamed protein product
            [Vitis vinifera]
          Length = 715

 Score =  707 bits (1824), Expect = 0.0
 Identities = 341/486 (70%), Positives = 395/486 (81%), Gaps = 6/486 (1%)
 Frame = -2

Query: 1440 VVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAE---PSGSPDAPEGAKVVEVKLSDGDPE 1270
            VVYPLHHGL+ P+SR++ISWSRGN+LRVS+F E    S   D   G KVV+VKL   D E
Sbjct: 23   VVYPLHHGLKPPISRLSISWSRGNALRVSVFRELPAESSDSDGEAGGKVVQVKLGVADGE 82

Query: 1269 ITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXP---YHLDWWEHVLQYSKDIXXXXX 1099
            + DA WRRIAYGSV+PF                      YH DWWE+V++YSKDI     
Sbjct: 83   VDDAQWRRIAYGSVSPFALLQSRRNSVLALSKMSMSSSPYHPDWWEYVMEYSKDISSLLD 142

Query: 1098 XXXXXXXPIIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLADYDSL 919
                    +I+D   ++K+ EEPTCLKAAW L+EIFY DK+SQAWLPER+VDWLADYD L
Sbjct: 143  NAKSLPNSMIDDPKTVLKKVEEPTCLKAAWGLLEIFYADKESQAWLPERIVDWLADYDVL 202

Query: 918  FTSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWLDIVVKMLRLHGSYQLD 739
            F+ TQ T+H KLV+FQK++V +QVIEDDPRYWE ++SAL+VGWL+IVVK+LRLHGSYQLD
Sbjct: 203  FSGTQATVHSKLVEFQKEIVRLQVIEDDPRYWEVITSALAVGWLEIVVKLLRLHGSYQLD 262

Query: 738  QLSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDFIKAWEKWRSQITKLDC 559
            QLS RE ENGLVEAVA+LISKMPR+RPE   G+LGECFK+KPDFIKAWEKWR+QITKLDC
Sbjct: 263  QLSNRETENGLVEAVAILISKMPRMRPELEAGRLGECFKTKPDFIKAWEKWRAQITKLDC 322

Query: 558  SPFWIQCDNEQTREGLRNLLQIMLGNTEILCTATCYWIELYVSHFLYIRPFTTGIESMHN 379
            S FW+QCD+ QTREGLRN+LQ+MLGNT  LCT+TC+WIELY+SHFLY+RPFT G+ESMH 
Sbjct: 323  SSFWVQCDHRQTREGLRNMLQLMLGNTNNLCTSTCHWIELYISHFLYVRPFTVGLESMHA 382

Query: 378  LAQKCIQLKPPSATHRLTGLMIGILGENTEVVLAECSREFGPWMVAHALELLTAGSEQAE 199
            LAQKCIQLKP S++HRL GL++GILGENTEVVLAECSR FGPWMVAHA+ELLTAGS+QAE
Sbjct: 383  LAQKCIQLKPISSSHRLMGLIVGILGENTEVVLAECSRAFGPWMVAHAIELLTAGSDQAE 442

Query: 198  ILLHDERYNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLCRQS 19
            I+L + R NLGGISI ELHRL YAQVLSSHALTWQIAPIYLTSCMKQGMGLLE LL +Q 
Sbjct: 443  IILQEGRDNLGGISIEELHRLIYAQVLSSHALTWQIAPIYLTSCMKQGMGLLEVLLYKQP 502

Query: 18   VQRNDM 1
            VQ N M
Sbjct: 503  VQDNQM 508


>ref|XP_002516506.1| conserved hypothetical protein [Ricinus communis]
            gi|223544326|gb|EEF45847.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 725

 Score =  645 bits (1664), Expect = 0.0
 Identities = 311/487 (63%), Positives = 388/487 (79%), Gaps = 7/487 (1%)
 Frame = -2

Query: 1440 VVYPLHHGLQRPVSRVAISWSRGNSLRVSLFAEPSGSPDAPE--GAKVVEVKLS-DGDPE 1270
            VVYPL HGL+ P+SRV+IS++RGNSLR+S+F +P    D     G KV+EVKL  +GD E
Sbjct: 31   VVYPLRHGLKPPISRVSISFARGNSLRISVFRQPFSDSDTDSEIGGKVLEVKLGGNGDGE 90

Query: 1269 ITDANWRRIAYGSVAPFXXXXXXXXXXXXXXXXXXP---YHLDWWEHVLQYSKDIXXXXX 1099
            + DA WRRIAY SV+P+                      YHL+WWE+V++YSKDI     
Sbjct: 91   LNDAYWRRIAYASVSPYALLKSRRNCASNLSKLQLSPSPYHLEWWEYVMEYSKDISSFLV 150

Query: 1098 XXXXXXXP-IIEDLSAIVKRSEEPTCLKAAWELMEIFYVDKQSQAWLPERLVDWLADYDS 922
                     +IED    +++ E PTCL+AAW+LMEIFY DK +Q+W+PER+VDWL+DYD 
Sbjct: 151  NPKSSTAGPVIEDPKEFLEKRERPTCLRAAWDLMEIFYADKLAQSWIPERMVDWLSDYDI 210

Query: 921  LFTSTQETIHGKLVDFQKDLVNIQVIEDDPRYWEAMSSALSVGWLDIVVKMLRLHGSYQL 742
            L +STQET++ KLV+FQ++LV +QVIED+P++WE +SSAL+VGWL+I VK+LRLHGSYQL
Sbjct: 211  LLSSTQETVYMKLVEFQEELVTLQVIEDNPKFWEVISSALAVGWLEIAVKVLRLHGSYQL 270

Query: 741  DQLSKREIENGLVEAVAVLISKMPRLRPESSVGQLGECFKSKPDFIKAWEKWRSQITKLD 562
            DQL  RE ENGLVEAVAVL+SKMPR+RP  + G+LGECFK+KPDF+KAWE+WR+Q+TKL+
Sbjct: 271  DQLGSRETENGLVEAVAVLVSKMPRIRPGLTAGKLGECFKAKPDFMKAWERWRAQVTKLE 330

Query: 561  CSPFWIQCDNEQTREGLRNLLQIMLGNTEILCTATCYWIELYVSHFLYIRPFTTGIESMH 382
             S FW+QCD+ +TREGL+N+LQIMLGNT IL T TC W+E+Y+SH LYIRPFT G+ESM+
Sbjct: 331  SSAFWVQCDHRRTREGLKNMLQIMLGNTNILSTMTCNWVEMYISHILYIRPFTVGLESMY 390

Query: 381  NLAQKCIQLKPPSATHRLTGLMIGILGENTEVVLAECSREFGPWMVAHALELLTAGSEQA 202
            +LAQKCIQLKP S+ H+L  L++GILGENTEV+LAECSR FGPWMV HA+ELLTAGS QA
Sbjct: 391  SLAQKCIQLKPTSSPHKLMQLILGILGENTEVILAECSRGFGPWMVTHAIELLTAGSVQA 450

Query: 201  EILLHDERYNLGGISIVELHRLAYAQVLSSHALTWQIAPIYLTSCMKQGMGLLENLLCRQ 22
            E+LL++ER NLGGISI ELH+L YAQVLSSH LTWQIAPIYL SC+KQGMGLLE+LL RQ
Sbjct: 451  EMLLNEERDNLGGISIGELHQLVYAQVLSSHILTWQIAPIYLISCIKQGMGLLESLLYRQ 510

Query: 21   SVQRNDM 1
             VQ N++
Sbjct: 511  PVQYNEL 517


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