BLASTX nr result

ID: Glycyrrhiza23_contig00014060 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014060
         (498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like...   185   4e-45
ref|XP_003612231.1| RING finger protein [Medicago truncatula] gi...   174   7e-42
gb|AFK48908.1| unknown [Lotus japonicus]                              170   1e-40
ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycin...   157   8e-37
ref|XP_002531146.1| nucleic acid binding protein, putative [Rici...   112   3e-23

>ref|XP_003517159.1| PREDICTED: RING-H2 finger protein ATL44-like [Glycine max]
          Length = 133

 Score =  185 bits (469), Expect = 4e-45
 Identities = 92/133 (69%), Positives = 104/133 (78%), Gaps = 1/133 (0%)
 Frame = -3

Query: 496 LVSLVFNLIGLTEGPRNKDAPLP-YILVPKKKTNKQSSESATASNLMEKSTIESGAFCCV 320
           LVSLV NLIGL EG RN DAPLP Y+L    ++NKQ S  +T+++    S     ++CCV
Sbjct: 6   LVSLVINLIGLAEGTRNNDAPLPSYMLSSHIESNKQQSSESTSASA---SNFNEDSWCCV 62

Query: 319 CLSRLNNKDEIRVLPCLHEFHKVCVNRWLKGHHKTCPLCRFSIGGGAEEKSHRAEMFTEE 140
           CLSRL  KDEIRVLPC H+FHK CVNRWLKG HKTCPLCRFS+  GAEEKSHRAEMFTEE
Sbjct: 63  CLSRLKAKDEIRVLPCSHKFHKSCVNRWLKGRHKTCPLCRFSM--GAEEKSHRAEMFTEE 120

Query: 139 MLIWFSSFHITGM 101
           MLIWFSSFH+ GM
Sbjct: 121 MLIWFSSFHVAGM 133


>ref|XP_003612231.1| RING finger protein [Medicago truncatula]
           gi|355513566|gb|AES95189.1| RING finger protein
           [Medicago truncatula]
          Length = 142

 Score =  174 bits (441), Expect = 7e-42
 Identities = 90/132 (68%), Positives = 101/132 (76%), Gaps = 4/132 (3%)
 Frame = -3

Query: 493 VSLVFNLIGLTEGPRNKDAPLPYIL---VPKKKTNKQSSESATASNLMEKSTIESGAFCC 323
           VSL+FNLIGL E   N DA LPYI+   +   KTN+QSSES++ +N +          CC
Sbjct: 7   VSLIFNLIGLAETQTNNDAILPYIVATSIVPNKTNQQSSESSSTTNDV--------GLCC 58

Query: 322 VCLSRLNNKDEIRVLPCLHEFHKVCVNRWLKGHHKTCPLCRFSIGGGAEEKS-HRAEMFT 146
           VCLS LNNKDEIRVLPC HEFHKVCV+ WLKGHHKTCPLCRFS+  G EEKS HRAEMF+
Sbjct: 59  VCLSMLNNKDEIRVLPCSHEFHKVCVDSWLKGHHKTCPLCRFSM--GVEEKSHHRAEMFS 116

Query: 145 EEMLIWFSSFHI 110
           EEMLIWFSSFHI
Sbjct: 117 EEMLIWFSSFHI 128


>gb|AFK48908.1| unknown [Lotus japonicus]
          Length = 113

 Score =  170 bits (430), Expect = 1e-40
 Identities = 86/132 (65%), Positives = 96/132 (72%)
 Frame = -3

Query: 496 LVSLVFNLIGLTEGPRNKDAPLPYILVPKKKTNKQSSESATASNLMEKSTIESGAFCCVC 317
           LVSLVF+L+GL E PRN +                      ASN MEKS      +CCVC
Sbjct: 6   LVSLVFDLVGLAEVPRNNN---------------------DASNFMEKSG--GHGWCCVC 42

Query: 316 LSRLNNKDEIRVLPCLHEFHKVCVNRWLKGHHKTCPLCRFSIGGGAEEKSHRAEMFTEEM 137
           LSRL ++DEIRVLPCLHEFHK+CVNRWLKGHHKTCPLCRFS+ G AEEKSHRAEMFT+EM
Sbjct: 43  LSRLKDRDEIRVLPCLHEFHKICVNRWLKGHHKTCPLCRFSM-GAAEEKSHRAEMFTDEM 101

Query: 136 LIWFSSFHITGM 101
           +IWFSSFHI GM
Sbjct: 102 VIWFSSFHIAGM 113


>ref|NP_001235666.1| uncharacterized protein LOC100527665 [Glycine max]
           gi|255632902|gb|ACU16805.1| unknown [Glycine max]
          Length = 101

 Score =  157 bits (397), Expect = 8e-37
 Identities = 75/103 (72%), Positives = 84/103 (81%)
 Frame = -3

Query: 409 KKTNKQSSESATASNLMEKSTIESGAFCCVCLSRLNNKDEIRVLPCLHEFHKVCVNRWLK 230
           +   +QSSESA+ASN  E S      +CCVCLSRL  KDEIRVLPC H+FHK+CVN+WLK
Sbjct: 7   QNNKQQSSESASASNFNEDS------WCCVCLSRLKAKDEIRVLPCSHKFHKICVNKWLK 60

Query: 229 GHHKTCPLCRFSIGGGAEEKSHRAEMFTEEMLIWFSSFHITGM 101
           G HKTCPLCRFS+  GAEEKSHRAEMFTEEMLIWFSSFH+ GM
Sbjct: 61  GRHKTCPLCRFSM--GAEEKSHRAEMFTEEMLIWFSSFHVAGM 101


>ref|XP_002531146.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223529259|gb|EEF31231.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 137

 Score =  112 bits (280), Expect = 3e-23
 Identities = 56/133 (42%), Positives = 76/133 (57%), Gaps = 2/133 (1%)
 Frame = -3

Query: 496 LVSLVFNLIGLTEGPRNKDAPLPYILVPKKKTNKQSSESATASNLMEKSTIES-GAFCCV 320
           L S ++N +      R KD             N +  E  +        T E+ G FCCV
Sbjct: 6   LASFIYNYMSPRRQLRIKDVTSYEATALNVSENSKDGELTSPGGSCSAETAEAEGEFCCV 65

Query: 319 CLSRLNNKDEIRVLPCLHEFHKVCVNRWLKGHHKTCPLCRFSIGGGAEEKSH-RAEMFTE 143
           CLSRL   + +RVLPC+H FH+VC++RW     KTCP+CRF++  G EE+++ R E  TE
Sbjct: 66  CLSRLKGGENMRVLPCMHRFHRVCIDRWFNVCRKTCPVCRFAM--GQEERTYKREEQLTE 123

Query: 142 EMLIWFSSFHITG 104
           EM+IWFSSFH+ G
Sbjct: 124 EMVIWFSSFHVAG 136


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