BLASTX nr result

ID: Glycyrrhiza23_contig00014036 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014036
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI27412.3| unnamed protein product [Vitis vinifera]              388   e-106
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...   388   e-106
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   387   e-105
ref|XP_003548663.1| PREDICTED: DNA-directed RNA polymerase 1B, m...   385   e-105
ref|XP_002311418.1| predicted protein [Populus trichocarpa] gi|2...   384   e-104

>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
          Length = 810

 Score =  388 bits (996), Expect = e-106
 Identities = 184/224 (82%), Positives = 197/224 (87%)
 Frame = -1

Query: 672 REAVKRAPMNQLDPVFEALDTLGNTKWRVNKRVLSVIDQIWANGGGLADLVDREDVPLPE 493
           REA+KRAP   L+P FEAL+TLGNTKWR+NKRVL VID+IWA+GG LADLVDREDVPLPE
Sbjct: 273 REAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPE 332

Query: 492 EPDTEDEGEIXXXXXXXXXXXXXXXXRHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 313
           EPDTEDE EI                RHSQRCDIELKLAVARKMKDE+GF+YPHNLDFRG
Sbjct: 333 EPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRG 392

Query: 312 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKAGLHWLKIHLANLFAGGVDKLCYEGRVAF 133
           RAYPMHPYLNHLGSDLCRGILEFAEGRPLGK+GL WLKIHLAN++AGGVDKL YEGRVAF
Sbjct: 393 RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAF 452

Query: 132 TENHLDDVFDSADRPLEGRRWWLEAEDPFQCLAACINLSEALRS 1
           TENHL+D+FDSADRPLEGRRWWL AEDPFQCLA CINLSEALRS
Sbjct: 453 TENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRS 496


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score =  388 bits (996), Expect = e-106
 Identities = 184/224 (82%), Positives = 197/224 (87%)
 Frame = -1

Query: 672  REAVKRAPMNQLDPVFEALDTLGNTKWRVNKRVLSVIDQIWANGGGLADLVDREDVPLPE 493
            REA+KRAP   L+P FEAL+TLGNTKWR+NKRVL VID+IWA+GG LADLVDREDVPLPE
Sbjct: 441  REAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPE 500

Query: 492  EPDTEDEGEIXXXXXXXXXXXXXXXXRHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 313
            EPDTEDE EI                RHSQRCDIELKLAVARKMKDE+GF+YPHNLDFRG
Sbjct: 501  EPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRG 560

Query: 312  RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKAGLHWLKIHLANLFAGGVDKLCYEGRVAF 133
            RAYPMHPYLNHLGSDLCRGILEFAEGRPLGK+GL WLKIHLAN++AGGVDKL YEGRVAF
Sbjct: 561  RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAF 620

Query: 132  TENHLDDVFDSADRPLEGRRWWLEAEDPFQCLAACINLSEALRS 1
            TENHL+D+FDSADRPLEGRRWWL AEDPFQCLA CINLSEALRS
Sbjct: 621  TENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRS 664


>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Glycine max]
          Length = 949

 Score =  387 bits (993), Expect = e-105
 Identities = 185/224 (82%), Positives = 199/224 (88%)
 Frame = -1

Query: 672  REAVKRAPMNQLDPVFEALDTLGNTKWRVNKRVLSVIDQIWANGGGLADLVDREDVPLPE 493
            REAVKRAP +QLDPVFEAL+TLG+TKWRVNKRVL VIDQIWANGG LADLVDRE+VP P+
Sbjct: 412  REAVKRAPKSQLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPK 471

Query: 492  EPDTEDEGEIXXXXXXXXXXXXXXXXRHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 313
            EPDT+DE EI                RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG
Sbjct: 472  EPDTKDEAEIRKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 531

Query: 312  RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKAGLHWLKIHLANLFAGGVDKLCYEGRVAF 133
            RAYPMHPYLNHLGSDLCRGILEF+EGRPLGK+GL WLKIHLANL+AGGVDKL Y+GR+ F
Sbjct: 532  RAYPMHPYLNHLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEF 591

Query: 132  TENHLDDVFDSADRPLEGRRWWLEAEDPFQCLAACINLSEALRS 1
            TENHLDD+FDSADRPLEG+RWWL+AEDPFQCLAAC NLSEALRS
Sbjct: 592  TENHLDDIFDSADRPLEGKRWWLQAEDPFQCLAACTNLSEALRS 635


>ref|XP_003548663.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
            [Glycine max]
          Length = 955

 Score =  385 bits (989), Expect = e-105
 Identities = 185/224 (82%), Positives = 197/224 (87%)
 Frame = -1

Query: 672  REAVKRAPMNQLDPVFEALDTLGNTKWRVNKRVLSVIDQIWANGGGLADLVDREDVPLPE 493
            REAVKRAP +QLDPVFEAL+TLGNTKWRVNKRVL VIDQIWANGG LADLVDRE+VP P+
Sbjct: 418  REAVKRAPKSQLDPVFEALNTLGNTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPSPK 477

Query: 492  EPDTEDEGEIXXXXXXXXXXXXXXXXRHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 313
            EPDT DE EI                RHSQRCDIELKLAVARKMKDEE FYYPHNLDFRG
Sbjct: 478  EPDTIDEAEIRKWKWKVKAVKKENSERHSQRCDIELKLAVARKMKDEEAFYYPHNLDFRG 537

Query: 312  RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKAGLHWLKIHLANLFAGGVDKLCYEGRVAF 133
            RAYPMHPYLNHLGSDLCRGILEFAEGR LGK+GL WLKIHLANL+AGGVDKL Y+GR++F
Sbjct: 538  RAYPMHPYLNHLGSDLCRGILEFAEGRSLGKSGLRWLKIHLANLYAGGVDKLSYDGRISF 597

Query: 132  TENHLDDVFDSADRPLEGRRWWLEAEDPFQCLAACINLSEALRS 1
            TENHLDD+FDSADRPLEG+ WWL+AEDPFQCLAACINLSEALRS
Sbjct: 598  TENHLDDIFDSADRPLEGKHWWLQAEDPFQCLAACINLSEALRS 641


>ref|XP_002311418.1| predicted protein [Populus trichocarpa] gi|222851238|gb|EEE88785.1|
            predicted protein [Populus trichocarpa]
          Length = 877

 Score =  384 bits (985), Expect = e-104
 Identities = 182/224 (81%), Positives = 197/224 (87%)
 Frame = -1

Query: 672  REAVKRAPMNQLDPVFEALDTLGNTKWRVNKRVLSVIDQIWANGGGLADLVDREDVPLPE 493
            R+AVKRA  NQL+PVF+ALDTLGNTKWR+NKRVL V+D+IWA+GG LA LVDRED PLPE
Sbjct: 340  RDAVKRASRNQLEPVFKALDTLGNTKWRINKRVLVVVDRIWASGGHLAGLVDREDAPLPE 399

Query: 492  EPDTEDEGEIXXXXXXXXXXXXXXXXRHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 313
            EP TEDE EI                RHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG
Sbjct: 400  EPQTEDEAEIRKWTWKVRSVKKENSERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRG 459

Query: 312  RAYPMHPYLNHLGSDLCRGILEFAEGRPLGKAGLHWLKIHLANLFAGGVDKLCYEGRVAF 133
            RAYPMHPYLNHLGSD+CRGILEFAEGRPLGK+GL WLKIHLANL+AGGVDKL Y+GR++F
Sbjct: 460  RAYPMHPYLNHLGSDVCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRISF 519

Query: 132  TENHLDDVFDSADRPLEGRRWWLEAEDPFQCLAACINLSEALRS 1
            TENHLDD+FDSAD+PLEGRRWWL AEDPFQCLAACINLSEALRS
Sbjct: 520  TENHLDDIFDSADQPLEGRRWWLGAEDPFQCLAACINLSEALRS 563


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