BLASTX nr result

ID: Glycyrrhiza23_contig00014003 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00014003
         (809 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK45442.1| unknown [Medicago truncatula]                          438   e-121
ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-li...   438   e-121
ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-li...   437   e-120
gb|ACJ85598.1| unknown [Medicago truncatula]                          435   e-120
ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated...   417   e-114

>gb|AFK45442.1| unknown [Medicago truncatula]
          Length = 555

 Score =  438 bits (1126), Expect = e-121
 Identities = 224/269 (83%), Positives = 242/269 (89%)
 Frame = -2

Query: 808 FGSLYSPLEFGKGDNGEVEARTAAKASDLFFTDRSADSVLSVYKQXXXXXXXXXXXXDAL 629
           FGSLYSP EFGKGD+ EV+A  +A AS+LFFTDRSADSVL+VY Q            DAL
Sbjct: 66  FGSLYSPPEFGKGDDDEVDAAASATASNLFFTDRSADSVLTVY-QEDADFSDESDNDDAL 124

Query: 628 QRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDWAQ 449
           +RKPVWVDEEEEKVTV+IAKVNRLRKLRKEEDE+LISGSEYVSRLRA H KLN GTDWAQ
Sbjct: 125 KRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGTDWAQ 184

Query: 448 LDSGLKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIEYSRLV 269
           LDSG K+D SSDDELTDDENKA VSRGYED+DDILRTNEDLVVKSSSKLLPGH+EYS+LV
Sbjct: 185 LDSGSKMDGSSDDELTDDENKAAVSRGYEDLDDILRTNEDLVVKSSSKLLPGHLEYSKLV 244

Query: 268 DANTQDPSNGPINSVQFHQNAQLMLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKAS 89
           DAN QDP+NGPINSVQFH+N QL+LAAGLDRKL+FFQIDGKRNTKI+SIFLEDCPIRKAS
Sbjct: 245 DANVQDPANGPINSVQFHRNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCPIRKAS 304

Query: 88  FLPDGSQVILSGRRKFFYSFDLVKARVDK 2
           FLPDGSQVI+SGRRKFFYS DLVKARVDK
Sbjct: 305 FLPDGSQVIISGRRKFFYSLDLVKARVDK 333


>ref|XP_003593289.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|355482337|gb|AES63540.1| U3 small
           nucleolar RNA-associated protein-like protein [Medicago
           truncatula]
          Length = 555

 Score =  438 bits (1126), Expect = e-121
 Identities = 224/269 (83%), Positives = 242/269 (89%)
 Frame = -2

Query: 808 FGSLYSPLEFGKGDNGEVEARTAAKASDLFFTDRSADSVLSVYKQXXXXXXXXXXXXDAL 629
           FGSLYSP EFGKGD+ EV+A  +A AS+LFFTDRSADSVL+VY Q            DAL
Sbjct: 66  FGSLYSPPEFGKGDDDEVDAAASATASNLFFTDRSADSVLTVY-QEDADFSDESDNDDAL 124

Query: 628 QRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDWAQ 449
           +RKPVWVDEEEEKVTV+IAKVNRLRKLRKEEDE+LISGSEYVSRLRA H KLN GTDWAQ
Sbjct: 125 KRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGTDWAQ 184

Query: 448 LDSGLKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIEYSRLV 269
           LDSG K+D SSDDELTDDENKA VSRGYED+DDILRTNEDLVVKSSSKLLPGH+EYS+LV
Sbjct: 185 LDSGSKMDGSSDDELTDDENKAAVSRGYEDLDDILRTNEDLVVKSSSKLLPGHLEYSKLV 244

Query: 268 DANTQDPSNGPINSVQFHQNAQLMLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKAS 89
           DAN QDP+NGPINSVQFH+N QL+LAAGLDRKL+FFQIDGKRNTKI+SIFLEDCPIRKAS
Sbjct: 245 DANVQDPANGPINSVQFHRNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCPIRKAS 304

Query: 88  FLPDGSQVILSGRRKFFYSFDLVKARVDK 2
           FLPDGSQVI+SGRRKFFYS DLVKARVDK
Sbjct: 305 FLPDGSQVIISGRRKFFYSLDLVKARVDK 333


>ref|XP_003597727.1| U3 small nucleolar RNA-associated protein-like protein [Medicago
           truncatula] gi|87240437|gb|ABD32295.1| WD40-like
           [Medicago truncatula] gi|217074444|gb|ACJ85582.1|
           unknown [Medicago truncatula]
           gi|355486775|gb|AES67978.1| U3 small nucleolar
           RNA-associated protein-like protein [Medicago
           truncatula] gi|388499470|gb|AFK37801.1| unknown
           [Medicago truncatula]
          Length = 555

 Score =  437 bits (1124), Expect = e-120
 Identities = 226/269 (84%), Positives = 240/269 (89%)
 Frame = -2

Query: 808 FGSLYSPLEFGKGDNGEVEARTAAKASDLFFTDRSADSVLSVYKQXXXXXXXXXXXXDAL 629
           FGSLYSPLEFG GD+ E EA TAAKAS+LFFTDRSADS L+VY Q            DAL
Sbjct: 66  FGSLYSPLEFGNGDDDEGEAMTAAKASNLFFTDRSADSGLTVY-QEDSDFSDGSCGDDAL 124

Query: 628 QRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDWAQ 449
           ++KPVWVDEEEEKVTV+IAKVNRLRKLRKEEDEN+ISGSEYVSRLRA HVKLN GTDWAQ
Sbjct: 125 RKKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDENVISGSEYVSRLRAQHVKLNRGTDWAQ 184

Query: 448 LDSGLKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIEYSRLV 269
           LDSG K+D SSDDELTDD N  +VSRGYED+DDILRTNEDLVVKSSSKLLPGHIEYS+LV
Sbjct: 185 LDSGSKMDGSSDDELTDDGNNVLVSRGYEDLDDILRTNEDLVVKSSSKLLPGHIEYSKLV 244

Query: 268 DANTQDPSNGPINSVQFHQNAQLMLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKAS 89
           DAN QDPSNGPINSVQFH+N QL+LAAGLDR LRFFQIDGKRNTKIQSIFLEDCPIRKAS
Sbjct: 245 DANIQDPSNGPINSVQFHRNGQLLLAAGLDRNLRFFQIDGKRNTKIQSIFLEDCPIRKAS 304

Query: 88  FLPDGSQVILSGRRKFFYSFDLVKARVDK 2
           FLPDGSQVI+SGRRKFFYS DLVKARVDK
Sbjct: 305 FLPDGSQVIISGRRKFFYSLDLVKARVDK 333


>gb|ACJ85598.1| unknown [Medicago truncatula]
          Length = 555

 Score =  435 bits (1118), Expect = e-120
 Identities = 223/269 (82%), Positives = 241/269 (89%)
 Frame = -2

Query: 808 FGSLYSPLEFGKGDNGEVEARTAAKASDLFFTDRSADSVLSVYKQXXXXXXXXXXXXDAL 629
           FGSLYSP EFGKGD+ EV+A  +A AS+LFFTDRSADSVL+VY Q            DAL
Sbjct: 66  FGSLYSPPEFGKGDDDEVDAAASATASNLFFTDRSADSVLTVY-QEDADFSDESDNDDAL 124

Query: 628 QRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDWAQ 449
           +RKPVWVDEEEEKVTV+IAKVNRLRKLRKEEDE+LISGSEYVSRLRA H KLN GTDWAQ
Sbjct: 125 KRKPVWVDEEEEKVTVNIAKVNRLRKLRKEEDEDLISGSEYVSRLRAQHAKLNRGTDWAQ 184

Query: 448 LDSGLKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIEYSRLV 269
           LDS  K+D SSDDELTDDENKA VSRGYED+DDILRTNEDLVVKSSSKLLPGH+EYS+LV
Sbjct: 185 LDSRSKMDGSSDDELTDDENKAAVSRGYEDLDDILRTNEDLVVKSSSKLLPGHLEYSKLV 244

Query: 268 DANTQDPSNGPINSVQFHQNAQLMLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRKAS 89
           DAN QDP+NGPINSVQFH+N QL+LAAGLDRKL+FFQIDGKRNTKI+SIFLEDCPIRKAS
Sbjct: 245 DANVQDPANGPINSVQFHRNGQLLLAAGLDRKLKFFQIDGKRNTKIESIFLEDCPIRKAS 304

Query: 88  FLPDGSQVILSGRRKFFYSFDLVKARVDK 2
           FLPDGSQVI+SGRRKFFYS DLVKARVDK
Sbjct: 305 FLPDGSQVIISGRRKFFYSLDLVKARVDK 333


>ref|XP_003543133.1| PREDICTED: U3 small nucleolar RNA-associated protein 18 homolog
           [Glycine max]
          Length = 551

 Score =  417 bits (1072), Expect = e-114
 Identities = 215/271 (79%), Positives = 236/271 (87%), Gaps = 2/271 (0%)
 Frame = -2

Query: 808 FGSLYSPLEFGKGDNGEVEARTAAKASDLFFTDRSADSVLSVYKQXXXXXXXXXXXXD-- 635
           FGSLYSPLEFGK ++     + A K SDLFFTDRSADSVL+VY++            D  
Sbjct: 61  FGSLYSPLEFGKEEDEVEPPKAAEKVSDLFFTDRSADSVLTVYREEDADLSEGSHDDDDR 120

Query: 634 ALQRKPVWVDEEEEKVTVSIAKVNRLRKLRKEEDENLISGSEYVSRLRAHHVKLNPGTDW 455
           ALQ+KPVWVD+EEE  TV+IAKVNRLRKLRK EDE+LISGSEYVSRLRA HVKLNPGT+W
Sbjct: 121 ALQKKPVWVDDEEENATVNIAKVNRLRKLRKGEDEDLISGSEYVSRLRAQHVKLNPGTEW 180

Query: 454 AQLDSGLKIDRSSDDELTDDENKAVVSRGYEDVDDILRTNEDLVVKSSSKLLPGHIEYSR 275
           A+ DS  +IDRSSDDELTDDEN+AV+S GYEDV+D+LRTNEDLVVKS +KLLPGH+EYSR
Sbjct: 181 ARADS--RIDRSSDDELTDDENEAVLSHGYEDVNDVLRTNEDLVVKSGTKLLPGHLEYSR 238

Query: 274 LVDANTQDPSNGPINSVQFHQNAQLMLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRK 95
           LVDAN QDP+NGPINSVQFH NAQL LAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRK
Sbjct: 239 LVDANIQDPANGPINSVQFHPNAQLFLAAGLDRKLRFFQIDGKRNTKIQSIFLEDCPIRK 298

Query: 94  ASFLPDGSQVILSGRRKFFYSFDLVKARVDK 2
           ASFLPDGSQVI+SGRRKFFYSFDLVKARVDK
Sbjct: 299 ASFLPDGSQVIVSGRRKFFYSFDLVKARVDK 329


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