BLASTX nr result

ID: Glycyrrhiza23_contig00013976 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013976
         (849 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK35607.1| unknown [Lotus japonicus]                              275   7e-72
ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II tra...   275   1e-71
ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycin...   274   2e-71
gb|AFK36513.1| unknown [Medicago truncatula]                          270   4e-70
ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II tra...   250   2e-64

>gb|AFK35607.1| unknown [Lotus japonicus]
          Length = 206

 Score =  275 bits (704), Expect = 7e-72
 Identities = 140/206 (67%), Positives = 145/206 (70%), Gaps = 3/206 (1%)
 Frame = -1

Query: 729 MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 550
           M SKT+ EN TDTTPS PKN+YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MTSKTDGENSTDTTPSLPKNIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 549 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 370
           AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLE LQNANFR+AMAHP+NKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLERLQNANFRSAMAHPNNKELAHRQQFYFWK 120

Query: 369 NYRNNRLKHIL---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSTQXXXXX 199
           NYRNNRLKHIL                                        SS Q     
Sbjct: 121 NYRNNRLKHILPRSLPEPSATPALPAPASTPIQPPVPALPPAPATNVAVTASSAQAPSPM 180

Query: 198 XXXXXXXXXXAKSDMRNPTVDRRKRK 121
                     AKSDMRNPTVDRR+RK
Sbjct: 181 PYGIPPGSGLAKSDMRNPTVDRRRRK 206


>ref|XP_003556072.1| PREDICTED: mediator of RNA polymerase II transcription subunit
           31-like [Glycine max]
          Length = 206

 Score =  275 bits (702), Expect = 1e-71
 Identities = 141/206 (68%), Positives = 149/206 (72%), Gaps = 3/206 (1%)
 Frame = -1

Query: 729 MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 550
           MASK ESEN TDT+PSSPKN+YKDPDDG+QRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 549 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 370
           AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHP+NKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELAHRQQFYFWK 120

Query: 369 NYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSS--TQXXXXXX 196
           NYRNNRLKHIL                                     ++  +Q      
Sbjct: 121 NYRNNRLKHILPRSLPEPATPAAPAPASTPSQAPVSALPPVPATSVAVTAAPSQAPSPMP 180

Query: 195 XXXXXXXXXAKSDMRNPTVD-RRKRK 121
                    AK+DMRNPTVD RRKRK
Sbjct: 181 YVMPPGSGLAKNDMRNPTVDNRRKRK 206


>ref|NP_001235064.1| uncharacterized protein LOC100527879 [Glycine max]
           gi|255633448|gb|ACU17082.1| unknown [Glycine max]
          Length = 205

 Score =  274 bits (700), Expect = 2e-71
 Identities = 138/204 (67%), Positives = 148/204 (72%), Gaps = 1/204 (0%)
 Frame = -1

Query: 729 MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 550
           MASK ESEN TDT+PSSPKN+YKDPDDG+QRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKIESENSTDTSPSSPKNIYKDPDDGQQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 549 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 370
           AFIGYLKYLQYWQRPEYIKFIMYPHC YFLELLQNANFRNAMAHP+NKELAHRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCFYFLELLQNANFRNAMAHPTNKELAHRQQFYFWK 120

Query: 369 NYRNNRLKHILXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSS-TQXXXXXXX 193
           NYRNNRLKHIL                                    T++ +Q       
Sbjct: 121 NYRNNRLKHILPRSLPELSATPAAPASTSSQAPVSALPPVPATSVAVTATPSQAPSPMPY 180

Query: 192 XXXXXXXXAKSDMRNPTVDRRKRK 121
                   AK+DMRNPTVD RK++
Sbjct: 181 GMPPGSGLAKNDMRNPTVDNRKKR 204


>gb|AFK36513.1| unknown [Medicago truncatula]
          Length = 204

 Score =  270 bits (689), Expect = 4e-70
 Identities = 138/204 (67%), Positives = 145/204 (71%), Gaps = 1/204 (0%)
 Frame = -1

Query: 729 MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 550
           MASKTES +P DT PS PK++YKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MASKTESGSPRDTPPSPPKSIYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 60

Query: 549 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 370
           AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHP+NKEL HRQQFYFWK
Sbjct: 61  AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPTNKELTHRQQFYFWK 120

Query: 369 NYRNNRLKHIL-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSSTQXXXXXXX 193
           NYRNNRLKHIL                                     TSS+Q       
Sbjct: 121 NYRNNRLKHILPRSLAEPSAALPAPASTQPQPPVPALPPVPATSVAVTTSSSQAPSPMPY 180

Query: 192 XXXXXXXXAKSDMRNPTVDRRKRK 121
                   AK+DMRN + DRRKRK
Sbjct: 181 GIPPGSGIAKNDMRNTSADRRKRK 204


>ref|XP_002279047.1| PREDICTED: mediator of RNA polymerase II transcription subunit 31
           [Vitis vinifera] gi|297737389|emb|CBI26590.3| unnamed
           protein product [Vitis vinifera]
          Length = 198

 Score =  250 bits (639), Expect = 2e-64
 Identities = 116/131 (88%), Positives = 124/131 (94%)
 Frame = -1

Query: 729 MASKTESENPTDTTPSSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 550
           M S  ES++  DT P+SPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE
Sbjct: 1   MDSGKESDSAADT-PTSPKNVYKDPDDGRQRFLLELEFVQCLANPTYIHYLAQNRYFEDE 59

Query: 549 AFIGYLKYLQYWQRPEYIKFIMYPHCLYFLELLQNANFRNAMAHPSNKELAHRQQFYFWK 370
           AFIGYLKYLQYWQ+PEYIKFIMYPHCL+FLELLQNANFRNAMAHP +KELAHRQQF++WK
Sbjct: 60  AFIGYLKYLQYWQQPEYIKFIMYPHCLFFLELLQNANFRNAMAHPGSKELAHRQQFFYWK 119

Query: 369 NYRNNRLKHIL 337
           NYRNNRLKHIL
Sbjct: 120 NYRNNRLKHIL 130


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