BLASTX nr result

ID: Glycyrrhiza23_contig00013974 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013974
         (388 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32365.3| unnamed protein product [Vitis vinifera]              120   1e-25
gb|AFK42989.1| unknown [Lotus japonicus]                              117   7e-25
gb|AFK42488.1| unknown [Medicago truncatula]                          117   7e-25
ref|XP_003521240.1| PREDICTED: small nuclear ribonucleoprotein S...   117   7e-25
ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein S...   117   7e-25

>emb|CBI32365.3| unnamed protein product [Vitis vinifera]
          Length = 144

 Score =  120 bits (300), Expect = 1e-25
 Identities = 72/115 (62%), Positives = 72/115 (62%)
 Frame = -1

Query: 346 FLCDPAFHLLFSATMKLVRFLMKLNNETVSIELKNGTXXXXXXXXXXXXXXXXXXXXXXX 167
           FL   A   L S  MKLVRFLMKLNNETVSIELKNGT                       
Sbjct: 17  FLAVFAGFRLHSPKMKLVRFLMKLNNETVSIELKNGTVVHGTIT---------------- 60

Query: 166 XXXXXXXXXXXGVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 2
                      GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 61  -----------GVDISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 104


>gb|AFK42989.1| unknown [Lotus japonicus]
          Length = 116

 Score =  117 bits (294), Expect = 7e-25
 Identities = 67/101 (66%), Positives = 67/101 (66%)
 Frame = -1

Query: 304 MKLVRFLMKLNNETVSIELKNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVD 125
           MKLVRFLMKLNNETVSIELKNGT                                  GVD
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTIT---------------------------GVD 33

Query: 124 ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 2
           ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 34  ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74


>gb|AFK42488.1| unknown [Medicago truncatula]
          Length = 115

 Score =  117 bits (294), Expect = 7e-25
 Identities = 67/101 (66%), Positives = 67/101 (66%)
 Frame = -1

Query: 304 MKLVRFLMKLNNETVSIELKNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVD 125
           MKLVRFLMKLNNETVSIELKNGT                                  GVD
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTIT---------------------------GVD 33

Query: 124 ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 2
           ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 34  ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74


>ref|XP_003521240.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 1
           [Glycine max] gi|356504918|ref|XP_003521241.1|
           PREDICTED: small nuclear ribonucleoprotein Sm D1-like
           isoform 2 [Glycine max]
          Length = 114

 Score =  117 bits (294), Expect = 7e-25
 Identities = 67/101 (66%), Positives = 67/101 (66%)
 Frame = -1

Query: 304 MKLVRFLMKLNNETVSIELKNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVD 125
           MKLVRFLMKLNNETVSIELKNGT                                  GVD
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTVVHGTIT---------------------------GVD 33

Query: 124 ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 2
           ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 34  ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 74


>ref|XP_003518667.1| PREDICTED: small nuclear ribonucleoprotein Sm D1-like isoform 2
           [Glycine max]
          Length = 126

 Score =  117 bits (294), Expect = 7e-25
 Identities = 67/101 (66%), Positives = 67/101 (66%)
 Frame = -1

Query: 304 MKLVRFLMKLNNETVSIELKNGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVD 125
           MKLVRFLMKLNNETVSIELKNGT                                  GVD
Sbjct: 1   MKLVRFLMKLNNETVSIELKNGTIVHGTITDKLTQWALDD-----------------GVD 43

Query: 124 ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 2
           ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL
Sbjct: 44  ISMNTHLKTVKLTLKGKNPVTLDHLSVRGNNIRYYILPDSL 84


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