BLASTX nr result

ID: Glycyrrhiza23_contig00013964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013964
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [...   197   6e-49
ref|XP_003539539.1| PREDICTED: reticulon-like protein B17-like [...   191   4e-47
ref|XP_003607499.1| Reticulon-like protein B18 [Medicago truncat...   191   4e-47
gb|AFK47382.1| unknown [Medicago truncatula]                          190   1e-46
ref|XP_003541899.1| PREDICTED: reticulon-like protein B17-like [...   189   3e-46

>ref|XP_003526265.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 430

 Score =  197 bits (502), Expect = 6e-49
 Identities = 95/121 (78%), Positives = 104/121 (85%)
 Frame = -1

Query: 363 RVEEKREIKLREDDILRLAKLILPALNLVISKTRVLFSGDPSMTLKVLPFLLLGAKYGHF 184
           +VE++   KL+EDDIL LAKLILPALN  ISKTR LFSG+P MTLKV PFLLLGA+YGH 
Sbjct: 240 QVEKRSFAKLKEDDILHLAKLILPALNFAISKTRELFSGEPCMTLKVAPFLLLGAEYGHL 299

Query: 183 ITIWRLCVIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITF 4
           ITIWRLC IGFFVSFSVP+LYSCY  QIN R ECLKLRLLDTWSAC+HKKIV+AS LI F
Sbjct: 300 ITIWRLCAIGFFVSFSVPRLYSCYSAQINLRVECLKLRLLDTWSACTHKKIVIASVLIAF 359

Query: 3   W 1
           W
Sbjct: 360 W 360


>ref|XP_003539539.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 393

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/120 (78%), Positives = 104/120 (86%)
 Frame = -1

Query: 360 VEEKREIKLREDDILRLAKLILPALNLVISKTRVLFSGDPSMTLKVLPFLLLGAKYGHFI 181
           VEEKREIKL+EDDI RLAKLILPALN  +S+ R LFSG+PSMTLKV+PFLLLGA+YGH I
Sbjct: 205 VEEKREIKLKEDDISRLAKLILPALNFALSRMRALFSGEPSMTLKVVPFLLLGAEYGHLI 264

Query: 180 TIWRLCVIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITFW 1
           TIWRLC IGF VSFSVPKLYSCY  QIN+RAE LK  LLDTWSAC+ KK V+ASAL+ FW
Sbjct: 265 TIWRLCAIGFLVSFSVPKLYSCYTAQINQRAEGLKSWLLDTWSACTRKKKVMASALMAFW 324


>ref|XP_003607499.1| Reticulon-like protein B18 [Medicago truncatula]
           gi|355508554|gb|AES89696.1| Reticulon-like protein B18
           [Medicago truncatula]
          Length = 390

 Score =  191 bits (486), Expect = 4e-47
 Identities = 91/114 (79%), Positives = 100/114 (87%)
 Frame = -1

Query: 342 IKLREDDILRLAKLILPALNLVISKTRVLFSGDPSMTLKVLPFLLLGAKYGHFITIWRLC 163
           +KL++DDILRLAKLILPALN   SKT  LFSG+PSMTLKV P LLLGA+YGH ITIWRL 
Sbjct: 207 VKLKDDDILRLAKLILPALNFAFSKTTELFSGEPSMTLKVAPLLLLGAEYGHLITIWRLS 266

Query: 162 VIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITFW 1
            IGFFV+FSVPKLYSCY  QIN+R ECLKLRLLDTW+ACSHKKIVV SAL+TFW
Sbjct: 267 AIGFFVNFSVPKLYSCYSAQINQRVECLKLRLLDTWNACSHKKIVVVSALVTFW 320


>gb|AFK47382.1| unknown [Medicago truncatula]
          Length = 364

 Score =  190 bits (482), Expect = 1e-46
 Identities = 90/114 (78%), Positives = 100/114 (87%)
 Frame = -1

Query: 342 IKLREDDILRLAKLILPALNLVISKTRVLFSGDPSMTLKVLPFLLLGAKYGHFITIWRLC 163
           +KL++DDILRLAKLILPALN   SKT  LFSG+PSMTLKV P LLLGA+YGH ITIWRL 
Sbjct: 224 VKLKDDDILRLAKLILPALNFAFSKTTELFSGEPSMTLKVAPLLLLGAEYGHLITIWRLS 283

Query: 162 VIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITFW 1
            IGFFV+FSVPKLYSCY  QIN+R ECLKLRLLDTW+ACSHK+IVV SAL+TFW
Sbjct: 284 AIGFFVNFSVPKLYSCYSAQINQRVECLKLRLLDTWNACSHKEIVVVSALVTFW 337


>ref|XP_003541899.1| PREDICTED: reticulon-like protein B17-like [Glycine max]
          Length = 385

 Score =  189 bits (479), Expect = 3e-46
 Identities = 96/120 (80%), Positives = 104/120 (86%)
 Frame = -1

Query: 360 VEEKREIKLREDDILRLAKLILPALNLVISKTRVLFSGDPSMTLKVLPFLLLGAKYGHFI 181
           VEEKREIKL EDDILRLAKLILPALN  IS+ R LFSG+PSMTLKV+PFLLLGA+YGH I
Sbjct: 197 VEEKREIKLTEDDILRLAKLILPALNFAISRMRALFSGEPSMTLKVVPFLLLGAEYGHLI 256

Query: 180 TIWRLCVIGFFVSFSVPKLYSCYYTQINRRAECLKLRLLDTWSACSHKKIVVASALITFW 1
           TI RLC IGF VSFSVPKLYS Y  QIN+RAE LK  LLDTWSAC+HKK V+ASAL+TFW
Sbjct: 257 TIRRLCAIGFVVSFSVPKLYSSYTVQINQRAEGLKSWLLDTWSACTHKKKVMASALMTFW 316


Top