BLASTX nr result

ID: Glycyrrhiza23_contig00013961 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013961
         (1562 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-l...   687   0.0  
ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-l...   677   0.0  
ref|XP_002520700.1| RNA binding protein, putative [Ricinus commu...   640   0.0  
ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B...   634   e-179
ref|XP_003518946.1| PREDICTED: CUGBP Elav-like family member 1-l...   632   e-179

>ref|XP_003521526.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 431

 Score =  687 bits (1773), Expect = 0.0
 Identities = 343/413 (83%), Positives = 349/413 (84%)
 Frame = -1

Query: 1385 VKLFVGQVPKHMNEAELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVN 1206
            VKLFVGQVPKHM E ELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVN
Sbjct: 15   VKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVN 74

Query: 1205 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEVSALFSKYGTINDLQI 1026
            ACHNK+TLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVE+SALFSKYGTI DLQI
Sbjct: 75   ACHNKRTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDLQI 134

Query: 1025 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTXXXXXXXXXXX 846
            LRGSQQTSKGCAFLKYETKEQAL ALEAINGKHKMEGSSVPLVVKWADT           
Sbjct: 135  LRGSQQTSKGCAFLKYETKEQALTALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194

Query: 845  XXXXXSNVPHADSQHPSLFGALPMGYVPPYNGYGYQAPGSYGLMPYRLPPMQNQPGYHNM 666
                 SNVPH DSQHPSLFGALPM YVPPYNGYGYQAP  YGLMPYR+PPMQ+Q GYHNM
Sbjct: 195  AQSQASNVPHTDSQHPSLFGALPMSYVPPYNGYGYQAPVGYGLMPYRMPPMQSQHGYHNM 254

Query: 665  MPHMNQGNVLRPDLGPNMNPRNYHVPPASYVGTYPAVPGLQHPMAYPAXXXXXXXXXXXX 486
            MPHMNQGN LRPDLGPNMNPRNYHVPPASYVG+YPAVPGLQHPMAYP             
Sbjct: 255  MPHMNQGNALRPDLGPNMNPRNYHVPPASYVGSYPAVPGLQHPMAYPTGMISPRPMNTSP 314

Query: 485  XXXXXXXXXXXXXXXXXXXXXXXGQIEGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS 306
                                   GQ EGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS
Sbjct: 315  GSVSPASGNNNHAASSGASKNSGGQAEGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS 374

Query: 305  AKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKQ 147
            AKVFVDKATGVSKCFGFVSYD+PEAAQSAISMMNGCQLGGKKLKVQ KRDNKQ
Sbjct: 375  AKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNKQ 427


>ref|XP_003554485.1| PREDICTED: CUGBP Elav-like family member 2-like [Glycine max]
          Length = 429

 Score =  677 bits (1746), Expect = 0.0
 Identities = 338/413 (81%), Positives = 347/413 (84%)
 Frame = -1

Query: 1385 VKLFVGQVPKHMNEAELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVN 1206
            VKLFVGQVPKHM E ELLAMFKEFALVDEVNIIKDKATRASRGCCF+ICPSREEADKAVN
Sbjct: 13   VKLFVGQVPKHMTEPELLAMFKEFALVDEVNIIKDKATRASRGCCFLICPSREEADKAVN 72

Query: 1205 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEVSALFSKYGTINDLQI 1026
            ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVE+SALFSKYGTI DLQI
Sbjct: 73   ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEISALFSKYGTIKDLQI 132

Query: 1025 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTXXXXXXXXXXX 846
            LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKME SSVPLVVKWADT           
Sbjct: 133  LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEDSSVPLVVKWADTEKERQARRAQK 192

Query: 845  XXXXXSNVPHADSQHPSLFGALPMGYVPPYNGYGYQAPGSYGLMPYRLPPMQNQPGYHNM 666
                 SNVPH DSQH S+FGALPM YVPPYNGY YQAPG YGLMPYR+PPMQ+Q GYHN+
Sbjct: 193  AQSQASNVPHTDSQHLSMFGALPMSYVPPYNGYAYQAPGGYGLMPYRMPPMQSQHGYHNV 252

Query: 665  MPHMNQGNVLRPDLGPNMNPRNYHVPPASYVGTYPAVPGLQHPMAYPAXXXXXXXXXXXX 486
            MPHMNQ N LRPDLGPNMNPRNYHVPPASYV +YPAVPGLQHPMAYP             
Sbjct: 253  MPHMNQVNALRPDLGPNMNPRNYHVPPASYVSSYPAVPGLQHPMAYPTGMISPRPMNTSP 312

Query: 485  XXXXXXXXXXXXXXXXXXXXXXXGQIEGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS 306
                                   GQ+EGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS
Sbjct: 313  GSVSPAGGNNSSAASSGASKNSGGQVEGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS 372

Query: 305  AKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKQ 147
            AKVFVDKATGVSKCFGFVSYD+PEAAQSAISMMNGCQLGGKKLKVQ KRDNKQ
Sbjct: 373  AKVFVDKATGVSKCFGFVSYDTPEAAQSAISMMNGCQLGGKKLKVQLKRDNKQ 425


>ref|XP_002520700.1| RNA binding protein, putative [Ricinus communis]
            gi|223540085|gb|EEF41662.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 436

 Score =  640 bits (1652), Expect = 0.0
 Identities = 321/419 (76%), Positives = 347/419 (82%), Gaps = 5/419 (1%)
 Frame = -1

Query: 1385 VKLFVGQVPKHMNEAELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVN 1206
            VKLFVGQVPKHM E +LLAMFKEFALVDEVNIIKDK TRASRGCCFVICPSR+EADKAVN
Sbjct: 15   VKLFVGQVPKHMTEVQLLAMFKEFALVDEVNIIKDKTTRASRGCCFVICPSRQEADKAVN 74

Query: 1205 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEVSALFSKYGTINDLQI 1026
            ACHNKKTLPGASSPLQVKYADGELERLEHKLF+GMLPKNVSE EVS LFS YGTI DLQI
Sbjct: 75   ACHNKKTLPGASSPLQVKYADGELERLEHKLFVGMLPKNVSEAEVSELFSTYGTIKDLQI 134

Query: 1025 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTXXXXXXXXXXX 846
            LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADT           
Sbjct: 135  LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTEKERQARRAQK 194

Query: 845  XXXXXSNVPHADSQHPSLFGALPMGYVPPYNGYGYQAPGSYGLMPYRLPPMQNQPGYHNM 666
                 SN+P+ADSQHPSLFGALPMGYVP YNGYGYQAPG+YGLMPYRLPP+Q+QP +H++
Sbjct: 195  VQSQASNLPNADSQHPSLFGALPMGYVPQYNGYGYQAPGTYGLMPYRLPPLQSQPAFHSI 254

Query: 665  MPHMNQGNVL----RPDLGPNMNPRNYHVPPASYVGT-YPAVPGLQHPMAYPAXXXXXXX 501
            +P +NQGN L    RPDLGP+M PRNY +PPASYVG+ YPAVPG+Q+PMAYP        
Sbjct: 255  IPPVNQGNALRGGVRPDLGPSMGPRNYALPPASYVGSAYPAVPGIQYPMAYPGGMMSPRP 314

Query: 500  XXXXXXXXXXXXXXXXXXXXXXXXXXXXGQIEGPPGANLFIYHIPQEFGDQELATAFQPF 321
                                        GQ+EGPPG+NLFIYHIPQEFGDQELA+AFQP+
Sbjct: 315  LSSSPGAVSPTVGSSNSATSSGVSSSSGGQLEGPPGSNLFIYHIPQEFGDQELASAFQPY 374

Query: 320  GRVLSAKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKQA 144
            G+VLSAKVFVDKATGVSKCFGFVSYDSP AAQ+AI+MMNGCQLGGKKLKVQ KRDNKQ+
Sbjct: 375  GKVLSAKVFVDKATGVSKCFGFVSYDSPTAAQTAINMMNGCQLGGKKLKVQLKRDNKQS 433


>ref|XP_003536312.1| PREDICTED: CUGBP Elav-like family member 1-B-like [Glycine max]
          Length = 429

 Score =  634 bits (1634), Expect = e-179
 Identities = 320/414 (77%), Positives = 337/414 (81%)
 Frame = -1

Query: 1385 VKLFVGQVPKHMNEAELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVN 1206
            VKLFVGQVPK M E E+LAMFKEFALVDEVNII+DKA+RASRGCCFVICPSREEADKAVN
Sbjct: 16   VKLFVGQVPKRMAEDEVLAMFKEFALVDEVNIIRDKASRASRGCCFVICPSREEADKAVN 75

Query: 1205 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEVSALFSKYGTINDLQI 1026
            ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS LFS YGTI DLQI
Sbjct: 76   ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVSDLFSMYGTIKDLQI 135

Query: 1025 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTXXXXXXXXXXX 846
            LRGSQQTSKGCAFLKYETKEQALAALEAINGKH MEGSSVPLVVKWADT           
Sbjct: 136  LRGSQQTSKGCAFLKYETKEQALAALEAINGKHTMEGSSVPLVVKWADTEKERLARRAQK 195

Query: 845  XXXXXSNVPHADSQHPSLFGALPMGYVPPYNGYGYQAPGSYGLMPYRLPPMQNQPGYHNM 666
                 SN+P AD QHPSLFGALPMGYVPPYNGYGYQAPG YGLM YR PPMQNQPG+HNM
Sbjct: 196  AQSQVSNMPQADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMAYRFPPMQNQPGFHNM 255

Query: 665  MPHMNQGNVLRPDLGPNMNPRNYHVPPASYVGTYPAVPGLQHPMAYPAXXXXXXXXXXXX 486
              +MNQ N +RPDLG ++NPRNYH PPASY+G YPAVPG+QHPM YP             
Sbjct: 256  --NMNQVNAVRPDLGHSVNPRNYHAPPASYIGPYPAVPGVQHPMVYP-RRIVSPRPMSSS 312

Query: 485  XXXXXXXXXXXXXXXXXXXXXXXGQIEGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS 306
                                   GQIEGPPGANLFIYHIPQE+GD+ELAT FQPFGRVLS
Sbjct: 313  SGSVSPAGGNSNSSSSGASKSSSGQIEGPPGANLFIYHIPQEYGDEELATTFQPFGRVLS 372

Query: 305  AKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKQA 144
            AK+FVDK TGVSKCFGFVSYD+PEAAQSAIS MNGCQLGGKKLKVQ KRDNKQ+
Sbjct: 373  AKIFVDKVTGVSKCFGFVSYDTPEAAQSAISTMNGCQLGGKKLKVQLKRDNKQS 426


>ref|XP_003518946.1| PREDICTED: CUGBP Elav-like family member 1-like [Glycine max]
          Length = 426

 Score =  632 bits (1631), Expect = e-179
 Identities = 318/414 (76%), Positives = 334/414 (80%)
 Frame = -1

Query: 1385 VKLFVGQVPKHMNEAELLAMFKEFALVDEVNIIKDKATRASRGCCFVICPSREEADKAVN 1206
            VKLFVGQVPK M+E E+LAMFKE ALVDEVNII+DKATRASRGCCFVICPSREEADKAVN
Sbjct: 15   VKLFVGQVPKRMSEDEVLAMFKELALVDEVNIIRDKATRASRGCCFVICPSREEADKAVN 74

Query: 1205 ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNVSEVEVSALFSKYGTINDLQI 1026
            ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKN+SE EVS LFSKYGTI DLQI
Sbjct: 75   ACHNKKTLPGASSPLQVKYADGELERLEHKLFIGMLPKNISEDEVSNLFSKYGTIKDLQI 134

Query: 1025 LRGSQQTSKGCAFLKYETKEQALAALEAINGKHKMEGSSVPLVVKWADTXXXXXXXXXXX 846
            LRGSQ TSKGCAFLKYETKEQA  ALEAINGKH MEGSSVPLVVKWADT           
Sbjct: 135  LRGSQHTSKGCAFLKYETKEQAFTALEAINGKHTMEGSSVPLVVKWADTEKERLARRAQK 194

Query: 845  XXXXXSNVPHADSQHPSLFGALPMGYVPPYNGYGYQAPGSYGLMPYRLPPMQNQPGYHNM 666
                 SN PHAD QHPSLFGALPMGYVPPYNGYGYQAPG YGLMPYR PP+QNQPG+HN 
Sbjct: 195  TQSRVSNAPHADPQHPSLFGALPMGYVPPYNGYGYQAPGGYGLMPYRFPPVQNQPGFHN- 253

Query: 665  MPHMNQGNVLRPDLGPNMNPRNYHVPPASYVGTYPAVPGLQHPMAYPAXXXXXXXXXXXX 486
               MNQ N +RPDLG +MNPRNY  PPASY+G+YPAVPG+QHPM YP             
Sbjct: 254  ---MNQANAVRPDLGHSMNPRNYPAPPASYIGSYPAVPGIQHPMVYP-RGIVSPRPMSSC 309

Query: 485  XXXXXXXXXXXXXXXXXXXXXXXGQIEGPPGANLFIYHIPQEFGDQELATAFQPFGRVLS 306
                                   GQIEGPPGANLFIYHIPQE+GDQEL TAFQPFGRVLS
Sbjct: 310  PGSVSPAGGNSNSSSSGASKSSSGQIEGPPGANLFIYHIPQEYGDQELTTAFQPFGRVLS 369

Query: 305  AKVFVDKATGVSKCFGFVSYDSPEAAQSAISMMNGCQLGGKKLKVQHKRDNKQA 144
            AK+FVDK TGVSKCFGFVSYD+PEAAQ+AIS MNGCQLGGKKLKVQ KRDNKQ+
Sbjct: 370  AKIFVDKVTGVSKCFGFVSYDTPEAAQAAISTMNGCQLGGKKLKVQLKRDNKQS 423


Top