BLASTX nr result

ID: Glycyrrhiza23_contig00013946 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013946
         (843 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK37698.1| unknown [Lotus japonicus]                              231   2e-58
ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatu...   227   2e-57
ref|XP_003518734.1| PREDICTED: 50S ribosomal protein L18, chloro...   213   4e-53
ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloro...   199   6e-49
emb|CBI23877.3| unnamed protein product [Vitis vinifera]              194   2e-47

>gb|AFK37698.1| unknown [Lotus japonicus]
          Length = 164

 Score =  231 bits (589), Expect = 2e-58
 Identities = 114/131 (87%), Positives = 118/131 (90%)
 Frame = -3

Query: 841 LTKKPFVIEARENARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDKNKKC 662
           L KKP V+EAR N R ES KIRNR+MQKKFNGTA HPRLSVFCSDKQLYAMLVDDKNKKC
Sbjct: 34  LIKKPLVVEARANTRTESPKIRNRRMQKKFNGTARHPRLSVFCSDKQLYAMLVDDKNKKC 93

Query: 661 LFYGSTLQKSFRQNPTCSTVEAAQCVGEALVKACVDLNINEISSYDRNGFGRGQKLDAFE 482
           LFYGSTL KSFR+NP CSTVEAAQ VGEALVKAC DL INEISSYDRNGFGRGQ+LDAFE
Sbjct: 94  LFYGSTLHKSFRENPPCSTVEAAQRVGEALVKACTDLKINEISSYDRNGFGRGQRLDAFE 153

Query: 481 IAISSYGFLPR 449
           IAISSYGFL R
Sbjct: 154 IAISSYGFLQR 164


>ref|XP_003613814.1| 50S ribosomal protein L18 [Medicago truncatula]
           gi|355515149|gb|AES96772.1| 50S ribosomal protein L18
           [Medicago truncatula]
          Length = 189

 Score =  227 bits (579), Expect = 2e-57
 Identities = 111/129 (86%), Positives = 121/129 (93%)
 Frame = -3

Query: 841 LTKKPFVIEARENARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDKNKKC 662
           L KK  V +A+ NARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDD+NKKC
Sbjct: 36  LIKKSLVTKAKANARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDQNKKC 95

Query: 661 LFYGSTLQKSFRQNPTCSTVEAAQCVGEALVKACVDLNINEISSYDRNGFGRGQKLDAFE 482
           LFYGSTLQK FR+NP CST+EAAQ VGEALVKACVDLNINEISSYDRNGFGRG++L+AFE
Sbjct: 96  LFYGSTLQKLFRENPPCSTIEAAQRVGEALVKACVDLNINEISSYDRNGFGRGERLNAFE 155

Query: 481 IAISSYGFL 455
           IAIS++GFL
Sbjct: 156 IAISNFGFL 164


>ref|XP_003518734.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Glycine
           max]
          Length = 170

 Score =  213 bits (542), Expect = 4e-53
 Identities = 111/134 (82%), Positives = 117/134 (87%), Gaps = 3/134 (2%)
 Frame = -3

Query: 841 LTKKPFVIEARE--NARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDKNK 668
           +TKKP VIEAR   N RKES KIRNR+M KK+NGTATHPRLSVFCSDKQLYAMLVDDKNK
Sbjct: 37  ITKKPLVIEARARANTRKESGKIRNRRMLKKYNGTATHPRLSVFCSDKQLYAMLVDDKNK 96

Query: 667 KCLFYGSTLQKSFRQNPTCSTVEAAQCVGEALVKACVDLNINEISSYDRNGF-GRGQKLD 491
           KCLFYGSTLQKS RQ+P CST+EAAQ VGEALVKACVDLNINEI SYDRNG   R +KL 
Sbjct: 97  KCLFYGSTLQKSIRQDPPCSTLEAAQRVGEALVKACVDLNINEILSYDRNGLRQREEKLK 156

Query: 490 AFEIAISSYGFLPR 449
           AFE AISSYGFLPR
Sbjct: 157 AFENAISSYGFLPR 170


>ref|XP_004135173.1| PREDICTED: 50S ribosomal protein L18, chloroplastic-like [Cucumis
           sativus] gi|449478396|ref|XP_004155307.1| PREDICTED: 50S
           ribosomal protein L18, chloroplastic-like [Cucumis
           sativus]
          Length = 180

 Score =  199 bits (506), Expect = 6e-49
 Identities = 95/126 (75%), Positives = 109/126 (86%)
 Frame = -3

Query: 832 KPFVIEARENARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDKNKKCLFY 653
           KP  I+AR N++ ESAK+RNR+MQKK+NGT T PRLSVFCSDKQLYAMLVDD+NKKCLFY
Sbjct: 54  KPLTIQARGNSKTESAKVRNRRMQKKYNGTPTRPRLSVFCSDKQLYAMLVDDQNKKCLFY 113

Query: 652 GSTLQKSFRQNPTCSTVEAAQCVGEALVKACVDLNINEISSYDRNGFGRGQKLDAFEIAI 473
           GSTLQKS R  P+C+T+EAAQ VGE LVK C+DLNI+EIS YDRNGF  G+K+ AFEIAI
Sbjct: 114 GSTLQKSMRPTPSCTTIEAAQHVGEELVKVCMDLNIHEISLYDRNGFACGEKMQAFEIAI 173

Query: 472 SSYGFL 455
           S YGFL
Sbjct: 174 SRYGFL 179


>emb|CBI23877.3| unnamed protein product [Vitis vinifera]
          Length = 164

 Score =  194 bits (494), Expect = 2e-47
 Identities = 94/128 (73%), Positives = 109/128 (85%)
 Frame = -3

Query: 832 KPFVIEARENARKESAKIRNRKMQKKFNGTATHPRLSVFCSDKQLYAMLVDDKNKKCLFY 653
           K  VIEAR NA+K+SAKIRNR++Q+KFNG+ T PRLSVFCS KQLYAMLVDD+NK+CLFY
Sbjct: 37  KAMVIEARANAKKDSAKIRNRRLQRKFNGSPTKPRLSVFCSAKQLYAMLVDDQNKRCLFY 96

Query: 652 GSTLQKSFRQNPTCSTVEAAQCVGEALVKACVDLNINEISSYDRNGFGRGQKLDAFEIAI 473
           GSTLQKS   N  CS +EAA+ VGE LVKAC+D  INEISSYDRNGF RG+++ AFEIAI
Sbjct: 97  GSTLQKSIHGNNPCSAIEAAERVGEELVKACIDHQINEISSYDRNGFARGERMQAFEIAI 156

Query: 472 SSYGFLPR 449
           S +GFLPR
Sbjct: 157 SRHGFLPR 164


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