BLASTX nr result
ID: Glycyrrhiza23_contig00013922
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00013922
(724 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containi... 158 1e-36
ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope... 145 1e-32
emb|CBI23460.3| unnamed protein product [Vitis vinifera] 140 3e-31
ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containi... 140 3e-31
ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|1... 134 1e-29
>ref|XP_003531991.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g60770-like [Glycine max]
Length = 490
Score = 158 bits (399), Expect = 1e-36
Identities = 74/82 (90%), Positives = 80/82 (97%)
Frame = +2
Query: 479 AAENYFVNLPESAKNHLCYGALLNCYCKELMTEKAEGLMEKMKELDLPLTSMPYNSLMTL 658
AAENYFV+LPE +KNHLCYGALLNCYCKELMTEK+EGLMEKMKEL LPL+SMPYNSLMTL
Sbjct: 108 AAENYFVSLPEPSKNHLCYGALLNCYCKELMTEKSEGLMEKMKELSLPLSSMPYNSLMTL 167
Query: 659 YTKVGQPEKIPSIIQEMKASNI 724
YTKVGQPEKIPS+IQEMKASN+
Sbjct: 168 YTKVGQPEKIPSLIQEMKASNV 189
Score = 125 bits (313), Expect = 1e-26
Identities = 64/89 (71%), Positives = 68/89 (76%)
Frame = +3
Query: 69 MSVMQRFGXXXXXXXXXXXYLEEALYVKLFKDGGSQLNVRQQLNQFIKSGKRVYKWEVGD 248
MS+MQ +G YLEEALY+KLFKDG SQL VRQ LN F+KS KRVYKWEVGD
Sbjct: 1 MSIMQLYGRSKSVVKRSKKYLEEALYMKLFKDGSSQLIVRQSLNNFVKSRKRVYKWEVGD 60
Query: 249 TLKKLRQRKLYLPALKLSETMTKRNMNKT 335
TLKKLR RKLY PALKLSETM KRNM KT
Sbjct: 61 TLKKLRDRKLYQPALKLSETMAKRNMIKT 89
>ref|XP_003551220.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
protein At1g60770-like [Glycine max]
Length = 469
Score = 145 bits (365), Expect = 1e-32
Identities = 68/82 (82%), Positives = 75/82 (91%)
Frame = +2
Query: 479 AAENYFVNLPESAKNHLCYGALLNCYCKELMTEKAEGLMEKMKELDLPLTSMPYNSLMTL 658
AA+NYFVNLPESAKNHLC+GA+LNCYCKE M EKAEG MEKMKEL LPL+SMPYNSL+ L
Sbjct: 117 AAKNYFVNLPESAKNHLCHGAILNCYCKEPMIEKAEGFMEKMKELSLPLSSMPYNSLIML 176
Query: 659 YTKVGQPEKIPSIIQEMKASNI 724
YTKVGQPEK+ S+IQEMK SNI
Sbjct: 177 YTKVGQPEKVSSLIQEMKTSNI 198
Score = 55.8 bits (133), Expect(2) = 3e-07
Identities = 30/42 (71%), Positives = 31/42 (73%)
Frame = +3
Query: 210 KSGKRVYKWEVGDTLKKLRQRKLYLPALKLSETMTKRNMNKT 335
+S R KWEV DTLKKL RKLY ALKLSETM KRNM KT
Sbjct: 57 RSTWRRRKWEVNDTLKKLDDRKLYQLALKLSETMAKRNMIKT 98
Score = 24.6 bits (52), Expect(2) = 3e-07
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +1
Query: 112 SGRRSTWRKR 141
SGRRSTWR+R
Sbjct: 54 SGRRSTWRRR 63
>emb|CBI23460.3| unnamed protein product [Vitis vinifera]
Length = 444
Score = 140 bits (353), Expect = 3e-31
Identities = 65/82 (79%), Positives = 77/82 (93%)
Frame = +2
Query: 479 AAENYFVNLPESAKNHLCYGALLNCYCKELMTEKAEGLMEKMKELDLPLTSMPYNSLMTL 658
AAENYF++LPE++KNHL YGALLNCYCKEL+TEKAE LME+MKEL L L+SMPYNSLMTL
Sbjct: 107 AAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTL 166
Query: 659 YTKVGQPEKIPSIIQEMKASNI 724
YTK+GQPEKIP+IIQE+K+ +I
Sbjct: 167 YTKIGQPEKIPTIIQELKSLDI 188
Score = 109 bits (273), Expect = 5e-22
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +3
Query: 126 YLEEALYVKLFKDGGSQLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYLPALKLSE 305
YLEEALY +LFKDG S+++VRQQLN F+KS KRV+KWEVGDT+KKLR RK + PALKLSE
Sbjct: 19 YLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSE 78
Query: 306 TMTKRNMNKT 335
TM KR MN T
Sbjct: 79 TMAKRGMNMT 88
>ref|XP_002267979.1| PREDICTED: pentatricopeptide repeat-containing protein At1g60770
[Vitis vinifera]
Length = 489
Score = 140 bits (353), Expect = 3e-31
Identities = 65/82 (79%), Positives = 77/82 (93%)
Frame = +2
Query: 479 AAENYFVNLPESAKNHLCYGALLNCYCKELMTEKAEGLMEKMKELDLPLTSMPYNSLMTL 658
AAENYF++LPE++KNHL YGALLNCYCKEL+TEKAE LME+MKEL L L+SMPYNSLMTL
Sbjct: 107 AAENYFIDLPETSKNHLTYGALLNCYCKELLTEKAEALMERMKELKLGLSSMPYNSLMTL 166
Query: 659 YTKVGQPEKIPSIIQEMKASNI 724
YTK+GQPEKIP+IIQE+K+ +I
Sbjct: 167 YTKIGQPEKIPTIIQELKSLDI 188
Score = 109 bits (273), Expect = 5e-22
Identities = 52/70 (74%), Positives = 60/70 (85%)
Frame = +3
Query: 126 YLEEALYVKLFKDGGSQLNVRQQLNQFIKSGKRVYKWEVGDTLKKLRQRKLYLPALKLSE 305
YLEEALY +LFKDG S+++VRQQLN F+KS KRV+KWEVGDT+KKLR RK + PALKLSE
Sbjct: 19 YLEEALYDRLFKDGSSEVSVRQQLNHFLKSSKRVFKWEVGDTVKKLRDRKRFYPALKLSE 78
Query: 306 TMTKRNMNKT 335
TM KR MN T
Sbjct: 79 TMAKRGMNMT 88
>ref|XP_002331159.1| predicted protein [Populus trichocarpa] gi|118487894|gb|ABK95769.1|
unknown [Populus trichocarpa]
gi|222873242|gb|EEF10373.1| predicted protein [Populus
trichocarpa]
Length = 490
Score = 134 bits (338), Expect = 1e-29
Identities = 64/82 (78%), Positives = 75/82 (91%)
Frame = +2
Query: 479 AAENYFVNLPESAKNHLCYGALLNCYCKELMTEKAEGLMEKMKELDLPLTSMPYNSLMTL 658
AAENYF++LPE++KN YGALLNCYCKELMTE+AE L+EKMKEL+L L+SM YNSLMTL
Sbjct: 108 AAENYFIDLPETSKNLRTYGALLNCYCKELMTEEAEALIEKMKELNLGLSSMSYNSLMTL 167
Query: 659 YTKVGQPEKIPSIIQEMKASNI 724
YTKVGQPE+IP+IIQEMKA N+
Sbjct: 168 YTKVGQPERIPAIIQEMKADNV 189
Score = 117 bits (292), Expect = 3e-24
Identities = 56/89 (62%), Positives = 69/89 (77%)
Frame = +3
Query: 69 MSVMQRFGXXXXXXXXXXXYLEEALYVKLFKDGGSQLNVRQQLNQFIKSGKRVYKWEVGD 248
M++ Q +G YLEEALYV+LFK+G S+++VRQQLNQF+KS KRV+KWEVGD
Sbjct: 1 MAMPQLYGRTKSVTKRSKKYLEEALYVRLFKEGSSEVSVRQQLNQFLKSSKRVFKWEVGD 60
Query: 249 TLKKLRQRKLYLPALKLSETMTKRNMNKT 335
T+KKLR R LY PA+KLSETM+ R MNKT
Sbjct: 61 TIKKLRSRNLYYPAVKLSETMSSRGMNKT 89