BLASTX nr result
ID: Glycyrrhiza23_contig00013920
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00013920 (817 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-... 77 6e-12 ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago... 72 1e-10 gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] 67 5e-09 ref|XP_002515294.1| ATP binding protein, putative [Ricinus commu... 65 2e-08 emb|CBI36942.3| unnamed protein product [Vitis vinifera] 65 2e-08 >ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max] Length = 1269 Score = 76.6 bits (187), Expect = 6e-12 Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 9/97 (9%) Frame = +3 Query: 552 LFGQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXXXXXXXXXXXXXXVEWPHD 731 L+ QE+IG+RI+VYWPLD AWYEGSV+SFD++TSKH+VRY +EW + Sbjct: 84 LYFQELIGRRIKVYWPLDKAWYEGSVKSFDSLTSKHVVRYDDGEEESLDLSKEKIEWLQE 143 Query: 732 -----XXXXXXXXXXXXXMVIEDD----EAKESHKDE 815 M+I+DD E +ESHK + Sbjct: 144 SSSKKLKRLRRGVPAVRKMMIDDDDEEVEEEESHKKD 180 >ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula] gi|355500980|gb|AES82183.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula] Length = 1312 Score = 72.0 bits (175), Expect = 1e-10 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 5/87 (5%) Frame = +3 Query: 570 IGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXXXXXXXXXXXXXXVEWPHD-----X 734 IGKRIRVYWPLD+AWYEG+V+SFD VTSKH +RY +EW D Sbjct: 91 IGKRIRVYWPLDEAWYEGTVKSFDTVTSKHRIRYDDDEEESIDLSKEKIEWIQDSSSKKL 150 Query: 735 XXXXXXXXXXXXMVIEDDEAKESHKDE 815 MVIE +E + K E Sbjct: 151 KRLRRGSSPIRKMVIEVEECPKEEKQE 177 >gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida] Length = 1303 Score = 67.0 bits (162), Expect = 5e-09 Identities = 33/87 (37%), Positives = 45/87 (51%) Frame = +3 Query: 555 FGQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXXXXXXXXXXXXXXVEWPHDX 734 +GQEV+ KR++VYWPLD WYEG V+SFD+ + KHLV Y +EW + Sbjct: 83 YGQEVVDKRVKVYWPLDKNWYEGFVKSFDSASGKHLVEYDDGEEEMIELAEEKIEWVEE- 141 Query: 735 XXXXXXXXXXXXMVIEDDEAKESHKDE 815 V+E+ E +E K E Sbjct: 142 APARKFRRLRRFSVVEEAEKEEEEKLE 168 >ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis] gi|223545774|gb|EEF47278.1| ATP binding protein, putative [Ricinus communis] Length = 1306 Score = 65.1 bits (157), Expect = 2e-08 Identities = 32/86 (37%), Positives = 44/86 (51%), Gaps = 4/86 (4%) Frame = +3 Query: 555 FGQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXXXXXXXXXXXXXXVEWPHD- 731 FG+EV+ KR++VYWPLD WYEG V+S+D + KHLV+Y +EW + Sbjct: 103 FGKEVVEKRVKVYWPLDKTWYEGCVKSYDEDSGKHLVQYDDFEEEVLDLGNEKIEWVEES 162 Query: 732 ---XXXXXXXXXXXXXMVIEDDEAKE 800 VIED+E K+ Sbjct: 163 VTKFKRLRRGSLAFKNTVIEDEEMKD 188 >emb|CBI36942.3| unnamed protein product [Vitis vinifera] Length = 1237 Score = 64.7 bits (156), Expect = 2e-08 Identities = 25/59 (42%), Positives = 37/59 (62%) Frame = +3 Query: 555 FGQEVIGKRIRVYWPLDDAWYEGSVQSFDNVTSKHLVRYXXXXXXXXXXXXXXVEWPHD 731 +G+EV+ +R++VYWPLD +WY G V+SFD +T +HLV+Y +EW D Sbjct: 62 YGEEVVNRRVKVYWPLDKSWYVGCVKSFDELTGEHLVQYDDADEETLDLGKEKIEWVED 120