BLASTX nr result

ID: Glycyrrhiza23_contig00013901 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013901
         (529 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001237697.1| PDR-like ABC-transporter [Glycine max] gi|94...   210   9e-53
ref|XP_003553512.1| PREDICTED: LOW QUALITY PROTEIN: pleiotropic ...   204   6e-51
ref|XP_003625398.1| Pleiotropic drug resistance protein [Medicag...   200   9e-50
ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicag...   197   8e-49
ref|XP_003625364.1| Pleiotropic drug resistance protein [Medicag...   197   8e-49

>ref|NP_001237697.1| PDR-like ABC-transporter [Glycine max] gi|94732079|emb|CAK03587.1|
            PDR-like ABC-transporter [Glycine max]
          Length = 1447

 Score =  210 bits (535), Expect = 9e-53
 Identities = 97/127 (76%), Positives = 106/127 (83%)
 Frame = +3

Query: 3    TFYGMMAVAVTPNQHISSIVSTAFYSIWNLFSGFIVPRPRIPVWWRWYSWINPVAWSLYG 182
            T+YGMM+VAVTPNQHISSIVS+AFY++WNLFSGFIVPRPRIPVWWRWYSW NPVAWSLYG
Sbjct: 1321 TYYGMMSVAVTPNQHISSIVSSAFYAVWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYG 1380

Query: 183  LVASQYGDMKHTIESSDGRPTVEGFVRSYFGFKHDFLGXXXXXXXXXXXXXXXXXXISIK 362
            LVASQYGD+K ++ESSDGR TVEGFVRSYFGFKHDFLG                  IS+K
Sbjct: 1381 LVASQYGDIKQSMESSDGRTTVEGFVRSYFGFKHDFLGVVAAVIVAFPVVFALVFAISVK 1440

Query: 363  MFNFQRR 383
            MFNFQRR
Sbjct: 1441 MFNFQRR 1447


>ref|XP_003553512.1| PREDICTED: LOW QUALITY PROTEIN: pleiotropic drug resistance protein
            3-like [Glycine max]
          Length = 748

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/128 (75%), Positives = 106/128 (82%), Gaps = 1/128 (0%)
 Frame = +3

Query: 3    TFYGMMAVAVTPNQHISSIVSTAFYSIWNLFSGFIVPRPRIPVWWRWYSWINPVAWSLYG 182
            T+YGMM+VAVTPNQHISSIVS+AFY++WNLFSGFIVPRPRIPVWWRWYSW NPVAWSLYG
Sbjct: 621  TYYGMMSVAVTPNQHISSIVSSAFYAVWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYG 680

Query: 183  LVASQYGDMKHTIESSDGRPTVEGFVRSYFGFKHDFLG-XXXXXXXXXXXXXXXXXXISI 359
            LVASQYGD++ ++ESSDGR TVEGFVRSYFGFKHDFLG                   IS+
Sbjct: 681  LVASQYGDIQQSMESSDGRTTVEGFVRSYFGFKHDFLGVVAVAVIVAFPVVFALVFAISV 740

Query: 360  KMFNFQRR 383
            KMFNFQRR
Sbjct: 741  KMFNFQRR 748


>ref|XP_003625398.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500413|gb|AES81616.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1444

 Score =  200 bits (509), Expect = 9e-50
 Identities = 93/127 (73%), Positives = 101/127 (79%)
 Frame = +3

Query: 3    TFYGMMAVAVTPNQHISSIVSTAFYSIWNLFSGFIVPRPRIPVWWRWYSWINPVAWSLYG 182
            TFYGMM+VA+TPN HIS IVS+AFYSIWNLFSGFIVPRPRIPVWWRWYSW NPVAWSLYG
Sbjct: 1318 TFYGMMSVAMTPNNHISIIVSSAFYSIWNLFSGFIVPRPRIPVWWRWYSWANPVAWSLYG 1377

Query: 183  LVASQYGDMKHTIESSDGRPTVEGFVRSYFGFKHDFLGXXXXXXXXXXXXXXXXXXISIK 362
            LV SQYGD+K  IE+SDGR TVE F+R+YFGFKHDFLG                  +SIK
Sbjct: 1378 LVTSQYGDVKQNIETSDGRQTVEDFLRNYFGFKHDFLGVVALVNVAFPIVFALVFALSIK 1437

Query: 363  MFNFQRR 383
            MFNFQRR
Sbjct: 1438 MFNFQRR 1444


>ref|XP_003625401.1| Pleiotropic drug resistance protein [Medicago truncatula]
            gi|355500416|gb|AES81619.1| Pleiotropic drug resistance
            protein [Medicago truncatula]
          Length = 1483

 Score =  197 bits (501), Expect = 8e-49
 Identities = 90/127 (70%), Positives = 100/127 (78%)
 Frame = +3

Query: 3    TFYGMMAVAVTPNQHISSIVSTAFYSIWNLFSGFIVPRPRIPVWWRWYSWINPVAWSLYG 182
            T+YG+M+VA+TPN HIS IVS+AFYSIWNLFSGFIVPRP IPVWWRWYSW NP+AWSLYG
Sbjct: 1357 TYYGLMSVAMTPNNHISIIVSSAFYSIWNLFSGFIVPRPNIPVWWRWYSWANPIAWSLYG 1416

Query: 183  LVASQYGDMKHTIESSDGRPTVEGFVRSYFGFKHDFLGXXXXXXXXXXXXXXXXXXISIK 362
            LV SQYGD KH IE+SDGR TVEGF+++YF FKHDFLG                  ISIK
Sbjct: 1417 LVVSQYGDEKHNIETSDGRQTVEGFLKNYFDFKHDFLGVVALVNVAFPIGFALVFAISIK 1476

Query: 363  MFNFQRR 383
            MFNFQRR
Sbjct: 1477 MFNFQRR 1483


>ref|XP_003625364.1| Pleiotropic drug resistance protein [Medicago truncatula]
           gi|355500379|gb|AES81582.1| Pleiotropic drug resistance
           protein [Medicago truncatula]
          Length = 586

 Score =  197 bits (501), Expect = 8e-49
 Identities = 91/127 (71%), Positives = 101/127 (79%)
 Frame = +3

Query: 3   TFYGMMAVAVTPNQHISSIVSTAFYSIWNLFSGFIVPRPRIPVWWRWYSWINPVAWSLYG 182
           T+YGMM+VA+TPN HIS IVS+AFYSIWNLFSGFIVPRP IPVWWRWYSW NP+AWSLYG
Sbjct: 460 TYYGMMSVALTPNNHISIIVSSAFYSIWNLFSGFIVPRPSIPVWWRWYSWANPIAWSLYG 519

Query: 183 LVASQYGDMKHTIESSDGRPTVEGFVRSYFGFKHDFLGXXXXXXXXXXXXXXXXXXISIK 362
           LVASQYGD+K  IE+SDGR TVE F+R+YFGFKHDFLG                  I+IK
Sbjct: 520 LVASQYGDVKQNIETSDGRQTVEEFLRNYFGFKHDFLGVVALVNVAFPIAFALVFAIAIK 579

Query: 363 MFNFQRR 383
           MFNFQRR
Sbjct: 580 MFNFQRR 586


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