BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013873
         (1084 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containi...   479   e-133
ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|2...   427   e-117
ref|XP_002532083.1| pentatricopeptide repeat-containing protein,...   419   e-115
ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata] g...   407   e-111
ref|NP_178067.1| pentatricopeptide repeat-containing protein [Ar...   405   e-111

>ref|XP_003555011.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79490,
            mitochondrial-like [Glycine max]
          Length = 752

 Score =  479 bits (1232), Expect = e-133
 Identities = 231/270 (85%), Positives = 252/270 (93%)
 Frame = +2

Query: 275  MRCYCYDSGGSKDWTEEIEYLDESGSVIYKGKGVRSVEPGLDDHVMVGEVKKPFLNALAV 454
            MRCYC+DSGG+K+WTEEIEYLDESG VIYKGKGVRSVEPG+DDHVMVGEVKKPF+NALAV
Sbjct: 1    MRCYCHDSGGAKEWTEEIEYLDESGGVIYKGKGVRSVEPGVDDHVMVGEVKKPFVNALAV 60

Query: 455  AKIVEGVKRWKWGPELETQLDKLQFVPNMTHITQALKVINNEGDACLSLFRWAKRQSWYS 634
            AKIVE VKRWKWGPEL+TQLDKLQFVPNMTHI QALKV+ +  DACLSLFRWAKRQ+WY 
Sbjct: 61   AKIVEVVKRWKWGPELDTQLDKLQFVPNMTHIAQALKVVGDV-DACLSLFRWAKRQAWYV 119

Query: 635  PSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSLIVACNRVIRYLSKAERLEVA 814
            PSDDCYVMLFDGLNQ++DF+GIQ LFDEMV DSA+ GVSL  ACNRVIRYL+KAE+LEV+
Sbjct: 120  PSDDCYVMLFDGLNQKRDFEGIQLLFDEMVGDSAD-GVSLFAACNRVIRYLAKAEKLEVS 178

Query: 815  FCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYESMEKANCSLDSSTYELMIPN 994
            FCCFKKI +AGC +DT+TYNSLITLFLNKGLPYKAFE+YESMEKA CSLD STYELMIPN
Sbjct: 179  FCCFKKILNAGCKVDTETYNSLITLFLNKGLPYKAFEMYESMEKAGCSLDGSTYELMIPN 238

Query: 995  LAKSGRLDAAFKLFQEMKGRDFRPGLNIFA 1084
            LAKSGRLDAAFKLFQEMK R FRPGLN+FA
Sbjct: 239  LAKSGRLDAAFKLFQEMKVRGFRPGLNVFA 268


>ref|XP_002316152.1| predicted protein [Populus trichocarpa] gi|222865192|gb|EEF02323.1|
            predicted protein [Populus trichocarpa]
          Length = 785

 Score =  427 bits (1097), Expect = e-117
 Identities = 211/290 (72%), Positives = 242/290 (83%), Gaps = 3/290 (1%)
 Frame = +2

Query: 224  RTPCLYKDSNFVGRVSLMRCYCYDSGG---SKDWTEEIEYLDESGSVIYKGKGVRSVEPG 394
            ++P L  +   V   S +R YC    G   S +WTE+IEYLDESGSVIY GKG+RSVEPG
Sbjct: 14   KSPNLVSNGGHVKANSFVRNYCAGKNGEAGSGEWTEDIEYLDESGSVIYSGKGIRSVEPG 73

Query: 395  LDDHVMVGEVKKPFLNALAVAKIVEGVKRWKWGPELETQLDKLQFVPNMTHITQALKVIN 574
            +DDHVM+G +KKP LNA AVAKIVE VKRWKWGPELETQLDKLQFVPNMTH+ QALK+IN
Sbjct: 74   VDDHVMIGGLKKPILNASAVAKIVEVVKRWKWGPELETQLDKLQFVPNMTHVVQALKIIN 133

Query: 575  NEGDACLSLFRWAKRQSWYSPSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSL 754
             E DA LSLF+WAKRQ+WY P+D+CYVMLFDGLNQ +DFDGIQSLFDEMV DS  S    
Sbjct: 134  -ESDALLSLFKWAKRQTWYVPNDECYVMLFDGLNQSRDFDGIQSLFDEMVCDSIKSATQF 192

Query: 755  IVACNRVIRYLSKAERLEVAFCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYE 934
              A NRV++YL+KAE+LEV+FCCFKK+QD+GC IDT+TYN L+ LFLNKGLPYKAFEIYE
Sbjct: 193  S-AYNRVLKYLAKAEKLEVSFCCFKKVQDSGCKIDTETYNILMKLFLNKGLPYKAFEIYE 251

Query: 935  SMEKANCSLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIFA 1084
            +ME A+CSLD STYELMIP+LAKSGRLDAAFKLFQEMK R+FRP L IF+
Sbjct: 252  TMEAAHCSLDVSTYELMIPSLAKSGRLDAAFKLFQEMKERNFRPSLGIFS 301



 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 44/166 (26%), Positives = 74/166 (44%)
 Frame = +2

Query: 584  DACLSLFRWAKRQSWYSPSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSLIVA 763
            DA   LF+  K ++ + PS   +  L D + +    +    ++ EM          + V+
Sbjct: 279  DAAFKLFQEMKERN-FRPSLGIFSSLVDSMGKAGRLETSMKVYMEMQGLGLRPSAIMYVS 337

Query: 764  CNRVIRYLSKAERLEVAFCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYESME 943
               +I   +KA +L+ A   + +++ AG   +   Y  +I      G    A  I+  ME
Sbjct: 338  ---LIESYTKAGKLDAALRLWDEMKIAGFRPNFGLYTLIIESHAKSGKLDIAMSIFRDME 394

Query: 944  KANCSLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIF 1081
            KA      STY  ++   A SG++DAA KL+  M     RPGL+ +
Sbjct: 395  KAGFLPTPSTYSSLLEMHAASGQVDAAMKLYNSMTNAGLRPGLSTY 440


>ref|XP_002532083.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223528243|gb|EEF30297.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 841

 Score =  419 bits (1077), Expect = e-115
 Identities = 206/288 (71%), Positives = 237/288 (82%), Gaps = 3/288 (1%)
 Frame = +2

Query: 230  PCLYKDSNFVGRVSLMRCYC---YDSGGSKDWTEEIEYLDESGSVIYKGKGVRSVEPGLD 400
            P   KDS F       R YC    + GGS  WTE+IEYLDESGSVIY GKG+RSVEPGLD
Sbjct: 82   PYCSKDSYFA------RNYCSGNINEGGSAKWTEDIEYLDESGSVIYSGKGIRSVEPGLD 135

Query: 401  DHVMVGEVKKPFLNALAVAKIVEGVKRWKWGPELETQLDKLQFVPNMTHITQALKVINNE 580
            DHVMVG +KKPFLN  AVAKIVE VKRWKWGPELETQLDKLQFVP+MTH+ QALK+IN +
Sbjct: 136  DHVMVGGLKKPFLNVAAVAKIVEIVKRWKWGPELETQLDKLQFVPSMTHVVQALKIIN-D 194

Query: 581  GDACLSLFRWAKRQSWYSPSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSLIV 760
             D  LSLF+WAKRQ+WY   D+CY +LFDGLN+ +DFDGIQSLFDEMV DS+  G+S + 
Sbjct: 195  ADGMLSLFKWAKRQTWYVVDDECYALLFDGLNKIRDFDGIQSLFDEMVQDSSKGGISSVY 254

Query: 761  ACNRVIRYLSKAERLEVAFCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYESM 940
            A NRVI++L+KAE+LE++FCCFKK+QD+GC IDT+TYN+LIT FLNKGLPYKAFEIYESM
Sbjct: 255  AYNRVIQHLAKAEKLELSFCCFKKVQDSGCKIDTQTYNALITSFLNKGLPYKAFEIYESM 314

Query: 941  EKANCSLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIFA 1084
            + A CSLD+STYELMIP+LAKSGRLD AFKLFQEMK R  RP   IF+
Sbjct: 315  QAAQCSLDASTYELMIPSLAKSGRLDVAFKLFQEMKERKIRPSFGIFS 362



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 43/166 (25%), Positives = 74/166 (44%)
 Frame = +2

Query: 584  DACLSLFRWAKRQSWYSPSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSLIVA 763
            D    LF+  K +    PS   +  L D + +    D    ++ EM      S  S+ V+
Sbjct: 340  DVAFKLFQEMKERK-IRPSFGIFSSLVDSMGKSGRLDTSMKIYMEMQGFGLRSSASMYVS 398

Query: 764  CNRVIRYLSKAERLEVAFCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYESME 943
               +I   +KA +L+ A   + +++ AG   +   Y  +I      G    A  I++ M+
Sbjct: 399  ---LIESYTKAGKLDTALRLWDEMKKAGFRPNYGLYTLIIESHAKSGKLDIATSIFKDMD 455

Query: 944  KANCSLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIF 1081
            KA      STY  ++   A SG++D+A KL+  M     +PGL+ +
Sbjct: 456  KAGFLPTPSTYSCLLEMHAASGQVDSAMKLYNSMTNAGLKPGLSTY 501


>ref|XP_002887788.1| EMB2217 [Arabidopsis lyrata subsp. lyrata]
            gi|297333629|gb|EFH64047.1| EMB2217 [Arabidopsis lyrata
            subsp. lyrata]
          Length = 832

 Score =  407 bits (1046), Expect = e-111
 Identities = 202/288 (70%), Positives = 242/288 (84%), Gaps = 7/288 (2%)
 Frame = +2

Query: 242  KDSNFVGRV----SLMRCYCYD-SGGSKD--WTEEIEYLDESGSVIYKGKGVRSVEPGLD 400
            +D NFVG      S++R +C + SGGS+   WTEE+EYLDESGSV++ GKG+RSVEPGLD
Sbjct: 62   RDPNFVGLTTQSRSIVRRFCSEKSGGSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLD 121

Query: 401  DHVMVGEVKKPFLNALAVAKIVEGVKRWKWGPELETQLDKLQFVPNMTHITQALKVINNE 580
            DHVMVG +KKP++NA AVAKIVE V+RWKWGPELETQLDKLQFVPNM HITQ+LK++  E
Sbjct: 122  DHVMVGGLKKPYMNASAVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVK-E 180

Query: 581  GDACLSLFRWAKRQSWYSPSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSLIV 760
             DA LSLFRWAK+Q WY PSD+CYV+LFDGLNQ +DF GIQSLF+EMV DS++ G     
Sbjct: 181  VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFG 240

Query: 761  ACNRVIRYLSKAERLEVAFCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYESM 940
            A N+VI+YL+KAE+LEVAFCCFKK Q++GC IDT+TYN+L+ LFLNKGLPYKAFEIYESM
Sbjct: 241  AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 300

Query: 941  EKANCSLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIFA 1084
            EK +  LD STYEL+IP+LAKSGRLDAAFKLFQ+MK R  RP  ++F+
Sbjct: 301  EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFS 348



 Score = 57.0 bits (136), Expect = 8e-06
 Identities = 41/166 (24%), Positives = 74/166 (44%)
 Frame = +2

Query: 584  DACLSLFRWAKRQSWYSPSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSLIVA 763
            DA   LF+  K +    PS   +  L D + +    D    ++ EM         ++ V+
Sbjct: 326  DAAFKLFQQMKERK-LRPSFSVFSSLVDSMGKAGRLDTSMKVYMEMQGFGHRPSATMFVS 384

Query: 764  CNRVIRYLSKAERLEVAFCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYESME 943
               +I   +KA +L+ A   + +++ +G   +   Y  +I      G    A  +++ ME
Sbjct: 385  ---LIDSYAKAGKLDTALRLWDEMKKSGFRPNFGLYTMIIESHAKSGKLEVAMSVFKDME 441

Query: 944  KANCSLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIF 1081
            KA      STY  ++   A SG++D+A K++  M     RPGL+ +
Sbjct: 442  KAGFLPTPSTYSCLLEMHAGSGQVDSAMKIYNSMTNAGLRPGLSSY 487


>ref|NP_178067.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75200795|sp|Q9SAK0.1|PP132_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At1g79490, mitochondrial; AltName: Full=Protein EMBRYO
            DEFECTIVE 2217; Flags: Precursor
            gi|4835759|gb|AAD30226.1|AC007202_8 T8K14.9 [Arabidopsis
            thaliana] gi|332198129|gb|AEE36250.1| pentatricopeptide
            repeat-containing protein [Arabidopsis thaliana]
          Length = 836

 Score =  405 bits (1041), Expect = e-111
 Identities = 199/288 (69%), Positives = 240/288 (83%), Gaps = 7/288 (2%)
 Frame = +2

Query: 242  KDSNFVGRV----SLMRCYCYDSGGSKD---WTEEIEYLDESGSVIYKGKGVRSVEPGLD 400
            +D NFVG      S++R +C +  GS +   WTEE+EYLDESGSV++ GKG+RSVEPGLD
Sbjct: 66   RDPNFVGLTTQCRSIVRRFCSEKIGSSESSGWTEEVEYLDESGSVLHSGKGIRSVEPGLD 125

Query: 401  DHVMVGEVKKPFLNALAVAKIVEGVKRWKWGPELETQLDKLQFVPNMTHITQALKVINNE 580
            DHVMVG +KKP++NA +VAKIVE V+RWKWGPELETQLDKLQFVPNM HITQ+LK++  E
Sbjct: 126  DHVMVGGLKKPYMNASSVAKIVEVVQRWKWGPELETQLDKLQFVPNMVHITQSLKIVK-E 184

Query: 581  GDACLSLFRWAKRQSWYSPSDDCYVMLFDGLNQRKDFDGIQSLFDEMVSDSANSGVSLIV 760
             DA LSLFRWAK+Q WY PSD+CYV+LFDGLNQ +DF GIQSLF+EMV DS++ G     
Sbjct: 185  VDAALSLFRWAKKQPWYLPSDECYVVLFDGLNQGRDFVGIQSLFEEMVQDSSSHGDLSFN 244

Query: 761  ACNRVIRYLSKAERLEVAFCCFKKIQDAGCDIDTKTYNSLITLFLNKGLPYKAFEIYESM 940
            A N+VI+YL+KAE+LEVAFCCFKK Q++GC IDT+TYN+L+ LFLNKGLPYKAFEIYESM
Sbjct: 245  AYNQVIQYLAKAEKLEVAFCCFKKAQESGCKIDTQTYNNLMMLFLNKGLPYKAFEIYESM 304

Query: 941  EKANCSLDSSTYELMIPNLAKSGRLDAAFKLFQEMKGRDFRPGLNIFA 1084
            EK +  LD STYEL+IP+LAKSGRLDAAFKLFQ+MK R  RP  ++F+
Sbjct: 305  EKTDSLLDGSTYELIIPSLAKSGRLDAAFKLFQQMKERKLRPSFSVFS 352