BLASTX nr result

ID: Glycyrrhiza23_contig00013845 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013845
         (559 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518474.1| PREDICTED: dr1-associated corepressor-like [...   221   5e-56
ref|XP_003545173.1| PREDICTED: dr1-associated corepressor-like [...   211   8e-53
ref|XP_002523220.1| negative cofactor 2 transcriptional co-repre...   193   2e-47
gb|AFK49674.1| nuclear transcription factor Y subunit C5 [Medica...   192   3e-47
ref|XP_002268866.1| PREDICTED: uncharacterized protein LOC100253...   191   7e-47

>ref|XP_003518474.1| PREDICTED: dr1-associated corepressor-like [Glycine max]
          Length = 279

 Score =  221 bits (564), Expect = 5e-56
 Identities = 113/132 (85%), Positives = 116/132 (87%)
 Frame = -2

Query: 435 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAK 256
           MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTY+ITLRRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYDITLRRGAK 60

Query: 255 TMNSFHLKQCVQTFNVFDFLKDIASKVPDLGGSVAAGDDQTVTKRRKVAXXXXXXXXXET 76
           TMN+FHLKQCVQTFNVFDFLKDI SKVPDLGGSVA GDD  VTKRRKVA         E 
Sbjct: 61  TMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGGSVATGDDHAVTKRRKVAGDDDNDSDEEL 120

Query: 75  TRNKMPEPGHTS 40
            RNK PEPGH+S
Sbjct: 121 KRNKKPEPGHSS 132


>ref|XP_003545173.1| PREDICTED: dr1-associated corepressor-like [Glycine max]
          Length = 286

 Score =  211 bits (536), Expect = 8e-53
 Identities = 112/144 (77%), Positives = 116/144 (80%), Gaps = 12/144 (8%)
 Frame = -2

Query: 435 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAK 256
           MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCD+TYEITLRRGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDQTYEITLRRGAK 60

Query: 255 TMNSFHLKQCVQTFNVFDFLKDIASKVPDLGGSVAAGDDQTVTKRRKVAXXXXXXXXXET 76
           TMN+FHLKQCVQTFNVFDFLKDI SKVPDLG SVA GDD  VTKRRKVA         E 
Sbjct: 61  TMNAFHLKQCVQTFNVFDFLKDIVSKVPDLGSSVATGDDHAVTKRRKVAGDDDNDSDEEL 120

Query: 75  TRNK------------MPEPGHTS 40
            RNK            +PEPGH+S
Sbjct: 121 KRNKKVIYQLYSITSSVPEPGHSS 144


>ref|XP_002523220.1| negative cofactor 2 transcriptional co-repressor, putative [Ricinus
           communis] gi|223537516|gb|EEF39141.1| negative cofactor
           2 transcriptional co-repressor, putative [Ricinus
           communis]
          Length = 288

 Score =  193 bits (490), Expect = 2e-47
 Identities = 101/132 (76%), Positives = 108/132 (81%)
 Frame = -2

Query: 435 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAK 256
           M+KKLDTRFPAARIKKIMQAD+DVGKIA+AVPLLVSKALELFLQDLCDRTY ITLRRGAK
Sbjct: 1   MKKKLDTRFPAARIKKIMQADDDVGKIALAVPLLVSKALELFLQDLCDRTYAITLRRGAK 60

Query: 255 TMNSFHLKQCVQTFNVFDFLKDIASKVPDLGGSVAAGDDQTVTKRRKVAXXXXXXXXXET 76
           T+NS HLKQCV TFN+FDFL +I  KVPDLGGS AAGDD TV KRRKVA         E 
Sbjct: 61  TLNSLHLKQCVHTFNIFDFLGEIVGKVPDLGGSGAAGDDCTVAKRRKVADDEDNDSDAEY 120

Query: 75  TRNKMPEPGHTS 40
            R+ M E  HTS
Sbjct: 121 NRSIMHEVTHTS 132


>gb|AFK49674.1| nuclear transcription factor Y subunit C5 [Medicago truncatula]
          Length = 302

 Score =  192 bits (488), Expect = 3e-47
 Identities = 95/108 (87%), Positives = 101/108 (93%)
 Frame = -2

Query: 435 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAK 256
           MRKKLDTRFPAARIKKIMQADED+GKIA+AVPLLV+KALELFLQDLCDRTYEITL RGAK
Sbjct: 1   MRKKLDTRFPAARIKKIMQADEDIGKIALAVPLLVAKALELFLQDLCDRTYEITLGRGAK 60

Query: 255 TMNSFHLKQCVQTFNVFDFLKDIASKVPDLGGSVAAGDDQTVTKRRKV 112
           T+N+FHLKQC+QT NVFDFLKD  SKVPDLGGS A GDDQTVTKRR V
Sbjct: 61  TVNAFHLKQCIQTCNVFDFLKDTVSKVPDLGGSAATGDDQTVTKRRFV 108


>ref|XP_002268866.1| PREDICTED: uncharacterized protein LOC100253016 [Vitis vinifera]
           gi|296083929|emb|CBI24317.3| unnamed protein product
           [Vitis vinifera]
          Length = 301

 Score =  191 bits (485), Expect = 7e-47
 Identities = 97/131 (74%), Positives = 110/131 (83%)
 Frame = -2

Query: 435 MRKKLDTRFPAARIKKIMQADEDVGKIAMAVPLLVSKALELFLQDLCDRTYEITLRRGAK 256
           MRKKLDTRFPA+RIKKIMQADEDVGKIA+AVPLLVSKALELFLQDLCDRTY+ITL RGAK
Sbjct: 1   MRKKLDTRFPASRIKKIMQADEDVGKIALAVPLLVSKALELFLQDLCDRTYQITLERGAK 60

Query: 255 TMNSFHLKQCVQTFNVFDFLKDIASKVPDLGGSVAAGDDQTVTKRRKVAXXXXXXXXXET 76
           TM+S HLKQCVQ FNVFDFL++I SKVPDLG S A G+D++ +KRRKV          E+
Sbjct: 61  TMSSLHLKQCVQRFNVFDFLREIVSKVPDLGCSDAGGEDRSASKRRKVVDDEGNDSDEES 120

Query: 75  TRNKMPEPGHT 43
            R++M E GHT
Sbjct: 121 KRSRMHETGHT 131


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