BLASTX nr result

ID: Glycyrrhiza23_contig00013843 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013843
         (847 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-l...   471   e-131
ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [...   468   e-130
ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helica...   397   e-108
ref|XP_002311345.1| predicted protein [Populus trichocarpa] gi|2...   391   e-107
ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinu...   386   e-105

>ref|XP_003517845.1| PREDICTED: ATP-dependent RNA helicase DHX8-like [Glycine max]
          Length = 705

 Score =  471 bits (1212), Expect = e-131
 Identities = 242/281 (86%), Positives = 259/281 (92%)
 Frame = -2

Query: 846 LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNFGNKNVN 667
           LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLK+VQLARS S+S GQGLNFGNKN+N
Sbjct: 133 LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKSVQLARSSSVSGGQGLNFGNKNMN 192

Query: 666 SFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQGRQFPV 487
              L EKEN QS  FL+K R  K APLKLIIMSASLDAR FSEYFGGAKAVHIQGRQFPV
Sbjct: 193 K--LFEKENDQSGIFLKKPRHEKYAPLKLIIMSASLDARAFSEYFGGAKAVHIQGRQFPV 250

Query: 486 DIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLTKLPEGS 307
           DIFYT   ETDY+DA++ITIFQ+HL EGPGDILVFLTGQEEIESVERLI+E+L +LP+ S
Sbjct: 251 DIFYTRDAETDYLDASLITIFQIHLEEGPGDILVFLTGQEEIESVERLISEKLPQLPQES 310

Query: 306 QMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPGFVKARS 127
           Q LLVVPIFAALPSEQQM+VFAP+P+G RKVILATNIAETSVTIPGIKYVIDPGFVKARS
Sbjct: 311 QKLLVVPIFAALPSEQQMRVFAPSPSGFRKVILATNIAETSVTIPGIKYVIDPGFVKARS 370

Query: 126 YDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPE 4
           YDPGKGMESLI++PTSKSQALQRSGRAGREGPGKCFRLYPE
Sbjct: 371 YDPGKGMESLIIIPTSKSQALQRSGRAGREGPGKCFRLYPE 411


>ref|XP_003520120.1| PREDICTED: ATP-dependent RNA helicase DHX8 [Glycine max]
          Length = 705

 Score =  468 bits (1205), Expect = e-130
 Identities = 242/281 (86%), Positives = 257/281 (91%)
 Frame = -2

Query: 846 LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNFGNKNVN 667
           LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARS S+S GQGL FGNKN+N
Sbjct: 133 LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSSSVSGGQGLIFGNKNMN 192

Query: 666 SFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQGRQFPV 487
              LLEKEN QS SFL+K    K APLKLIIMSASLDAR FSEYFGGAKAVHIQGRQFPV
Sbjct: 193 K--LLEKENDQSGSFLKKPHHEKYAPLKLIIMSASLDARAFSEYFGGAKAVHIQGRQFPV 250

Query: 486 DIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLTKLPEGS 307
           DIFYT   ETDY+DA++ITIFQ+HL EGPGDILVFLTGQEEIESVERLINE+L +LP+ +
Sbjct: 251 DIFYTRDAETDYLDASLITIFQIHLEEGPGDILVFLTGQEEIESVERLINEKLPQLPQEN 310

Query: 306 QMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPGFVKARS 127
           Q LLVV IFAALPSEQQM+VFAPAP+G RKVILATNIAETSVTIPGIKYVIDPGFVKARS
Sbjct: 311 QKLLVVSIFAALPSEQQMRVFAPAPSGFRKVILATNIAETSVTIPGIKYVIDPGFVKARS 370

Query: 126 YDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPE 4
           YDPGKGMESLI++P SKSQALQRSGRAGREGPGKCFRLYPE
Sbjct: 371 YDPGKGMESLIIIPASKSQALQRSGRAGREGPGKCFRLYPE 411


>ref|XP_002282341.2| PREDICTED: putative ATP-dependent RNA helicase DHX33-like [Vitis
           vinifera]
          Length = 713

 Score =  397 bits (1019), Expect = e-108
 Identities = 212/283 (74%), Positives = 238/283 (84%), Gaps = 1/283 (0%)
 Frame = -2

Query: 846 LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNFGNKNVN 667
           LREALLDP+LS+YSVIIVDEAHERT+HTDVL+GLLKNVQ ARS S++  + LN  N   N
Sbjct: 140 LREALLDPFLSRYSVIIVDEAHERTIHTDVLLGLLKNVQNARSRSIN--KCLNIENTEAN 197

Query: 666 SFVLLEKENCQSSSFLRKDRQGKNAP-LKLIIMSASLDARTFSEYFGGAKAVHIQGRQFP 490
              LL++EN  +   + K  QG   P LKLIIMSASLDAR FSEYFGGA++V+IQGRQFP
Sbjct: 198 YGKLLKRENDANCVSILKRCQGVKFPSLKLIIMSASLDARGFSEYFGGARSVYIQGRQFP 257

Query: 489 VDIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLTKLPEG 310
           VDIFYT   E DYVDAA+ITIFQ+HL EGPGDILVFLTGQEEIESVERL+ ERL +LPEG
Sbjct: 258 VDIFYTHHAEPDYVDAALITIFQIHLEEGPGDILVFLTGQEEIESVERLVQERLRQLPEG 317

Query: 309 SQMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPGFVKAR 130
           SQ LL VPIF++LPSEQQMK F PAPAG RKVILATNIAETSVTIPGIKYVIDPG VKAR
Sbjct: 318 SQKLLTVPIFSSLPSEQQMKAFMPAPAGFRKVILATNIAETSVTIPGIKYVIDPGVVKAR 377

Query: 129 SYDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPEN 1
           +Y+   G+ESL +V TSK+QALQRSGRAGRE PGKCFRLYPE+
Sbjct: 378 TYNAHTGIESLDIVKTSKAQALQRSGRAGRERPGKCFRLYPES 420


>ref|XP_002311345.1| predicted protein [Populus trichocarpa] gi|222851165|gb|EEE88712.1|
           predicted protein [Populus trichocarpa]
          Length = 658

 Score =  391 bits (1005), Expect = e-107
 Identities = 206/282 (73%), Positives = 225/282 (79%)
 Frame = -2

Query: 846 LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNFGNKNVN 667
           LREALLDPYLS+YSVIIVDEAHERTVHTDVL+GLLKNVQ AR  S               
Sbjct: 114 LREALLDPYLSRYSVIIVDEAHERTVHTDVLLGLLKNVQRARLKSC-------------- 159

Query: 666 SFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQGRQFPV 487
                               Q K  PLKLIIMSASLDAR FSEYFGGA+AVH++GRQ  V
Sbjct: 160 --------------------QRKFPPLKLIIMSASLDARLFSEYFGGARAVHVEGRQHHV 199

Query: 486 DIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLTKLPEGS 307
           DIFYTL  ETDYVDAA+ITIFQ+HL EGPGDILVFLTGQEEIE VERL+ E+L KLPE S
Sbjct: 200 DIFYTLHAETDYVDAALITIFQIHLEEGPGDILVFLTGQEEIEGVERLVQEQLQKLPEES 259

Query: 306 QMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPGFVKARS 127
           + L+  PIF++LPSEQQM+VF PAPAG RKVILATNIAETSVTIPGIKYVIDPGF+KARS
Sbjct: 260 RKLVTAPIFSSLPSEQQMRVFMPAPAGHRKVILATNIAETSVTIPGIKYVIDPGFIKARS 319

Query: 126 YDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPEN 1
           YDP KGMESLI++PTSK+QALQRSGRAGREGPGKCFRLYPE+
Sbjct: 320 YDPVKGMESLIIIPTSKAQALQRSGRAGREGPGKCFRLYPES 361


>ref|XP_002512067.1| ATP-dependent RNA helicase, putative [Ricinus communis]
           gi|223549247|gb|EEF50736.1| ATP-dependent RNA helicase,
           putative [Ricinus communis]
          Length = 690

 Score =  386 bits (992), Expect = e-105
 Identities = 200/281 (71%), Positives = 226/281 (80%)
 Frame = -2

Query: 846 LREALLDPYLSKYSVIIVDEAHERTVHTDVLMGLLKNVQLARSDSMSDGQGLNFGNKNVN 667
           LREALLDPYLS+YSVII+DEAHERTVHTDVL+GLLKNVQ ARS S+S+ + ++ G K   
Sbjct: 137 LREALLDPYLSRYSVIIIDEAHERTVHTDVLLGLLKNVQYARSKSVSNQKTIDDGRKL-- 194

Query: 666 SFVLLEKENCQSSSFLRKDRQGKNAPLKLIIMSASLDARTFSEYFGGAKAVHIQGRQFPV 487
                                    PLKLIIMSASLDAR FSEYFGGA+AVHI+GR   V
Sbjct: 195 ------------------------PPLKLIIMSASLDARVFSEYFGGARAVHIEGRLHQV 230

Query: 486 DIFYTLLPETDYVDAAMITIFQVHLGEGPGDILVFLTGQEEIESVERLINERLTKLPEGS 307
           DI YT+ PE DY+DAA++T+FQ+HL E PGD+LVFLTGQEEIESVERL+ E+L +LPE  
Sbjct: 231 DILYTVHPEKDYLDAALMTLFQIHLEEAPGDVLVFLTGQEEIESVERLVQEKLQQLPEAK 290

Query: 306 QMLLVVPIFAALPSEQQMKVFAPAPAGSRKVILATNIAETSVTIPGIKYVIDPGFVKARS 127
           + LL VPIF++LPSEQQM+VF P P G RKVILATNIAETSVTIPGIKYVIDPG VKARS
Sbjct: 291 RKLLTVPIFSSLPSEQQMRVFMPTPPGHRKVILATNIAETSVTIPGIKYVIDPGLVKARS 350

Query: 126 YDPGKGMESLIVVPTSKSQALQRSGRAGREGPGKCFRLYPE 4
           YDP KGMESL+VVPTSK+QALQRSGRAGREGPGKCFRLYPE
Sbjct: 351 YDPVKGMESLVVVPTSKAQALQRSGRAGREGPGKCFRLYPE 391