BLASTX nr result

ID: Glycyrrhiza23_contig00013812 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013812
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003607500.1| hypothetical protein MTR_4g078750 [Medicago ...   219   2e-55
ref|XP_003526264.1| PREDICTED: putative pentatricopeptide repeat...   210   9e-53
ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat...   156   2e-36
emb|CBI28823.3| unnamed protein product [Vitis vinifera]              156   2e-36
ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|2...   139   3e-31

>ref|XP_003607500.1| hypothetical protein MTR_4g078750 [Medicago truncatula]
           gi|355508555|gb|AES89697.1| hypothetical protein
           MTR_4g078750 [Medicago truncatula]
          Length = 470

 Score =  219 bits (558), Expect = 2e-55
 Identities = 113/177 (63%), Positives = 133/177 (75%)
 Frame = -2

Query: 533 QLAQRCMKHPRQMKQIHSLVITNGYLLHDPNSPSSTSTHYYNNKKWMPTLLYNALIRAXX 354
           QLAQRCMKH +QMKQIHSLVITNGYL    N   S +  + N+ KWMPTLL NALIRA  
Sbjct: 10  QLAQRCMKHQKQMKQIHSLVITNGYL----NFQKSNNASFSNHIKWMPTLLCNALIRAYN 65

Query: 353 XXXXXXNKKVLLLFTHMLANEAPPNTHTFPPLLKSTPPSLATPLHSQALRRGLFSDPFVL 174
                   KV ++FT+MLAN   PNTHTFPPLLKS+   + TPLH QAL+RG+ SDPFVL
Sbjct: 66  VHNH---NKVFVIFTNMLANNVSPNTHTFPPLLKSSSAFVVTPLHCQALKRGILSDPFVL 122

Query: 173 TTLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHR 3
           TTLLV+YAR NH+  A KVFEE+P+FCIVA NAMINA ++NG+MEGA  +F  MP+R
Sbjct: 123 TTLLVVYARTNHIVCAQKVFEEVPMFCIVASNAMINAFTMNGNMEGALLVFEWMPYR 179


>ref|XP_003526264.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Glycine max]
          Length = 503

 Score =  210 bits (535), Expect = 9e-53
 Identities = 110/176 (62%), Positives = 126/176 (71%)
 Frame = -2

Query: 530 LAQRCMKHPRQMKQIHSLVITNGYLLHDPNSPSSTSTHYYNNKKWMPTLLYNALIRAXXX 351
           L Q+C K  +QMKQIHSL+ITNG+L    N PSS+ +       WMPTLLYNALI A   
Sbjct: 44  LTQKCKKLQKQMKQIHSLIITNGHLHQHQNVPSSSLS-----LPWMPTLLYNALISAYHI 98

Query: 350 XXXXXNKKVLLLFTHMLANEAPPNTHTFPPLLKSTPPSLATPLHSQALRRGLFSDPFVLT 171
                  K L +FTHMLAN+APPN+HTFPPLLK +P  L   LHSQ L+RGL SD F+LT
Sbjct: 99  HNH---NKALSIFTHMLANQAPPNSHTFPPLLKISPLPLGATLHSQTLKRGLLSDGFILT 155

Query: 170 TLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHR 3
           TLL LYARN+ L HA  VFEE P+FCIVACNAMINA S+NGDME A +LF RMP R
Sbjct: 156 TLLALYARNHLLPHARMVFEEFPMFCIVACNAMINAFSMNGDMEAAVALFERMPRR 211


>ref|XP_003633296.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g10330-like [Vitis vinifera]
          Length = 531

 Score =  156 bits (395), Expect = 2e-36
 Identities = 91/184 (49%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
 Frame = -2

Query: 533 QLAQRCMKHPRQMKQIHSLVITNGYLLHDPNSPSSTSTHYYNNKKWMPTLLYNALIRAXX 354
           +L Q  +KHP+Q+KQ+HSL+ITNG+LL   N+         +N KWM TLLYN+LIR   
Sbjct: 18  RLLQGLIKHPKQIKQVHSLLITNGHLLPCSNA---------SNLKWMATLLYNSLIRGYL 68

Query: 353 XXXXXXNKKVLLLFTHMLANEAPPNTHTFPPLLK---STPPSLA----TPLHSQALRRGL 195
                   K LL+FTHMLA++APPN  TFP ++K   S  PSLA    TPLH+  ++RGL
Sbjct: 69  NFVEPH--KTLLIFTHMLAHQAPPNNLTFPSIIKKAASCSPSLAFMIGTPLHTHVIKRGL 126

Query: 194 FSDPFVLTTLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTR 15
             D F+ T+L+VLYAR   +  A +VFEEI   C+V+ NAM++AL  NGDM  A  LF  
Sbjct: 127 SHDLFIQTSLVVLYARLCKVSDACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFES 186

Query: 14  MPHR 3
           MP R
Sbjct: 187 MPER 190


>emb|CBI28823.3| unnamed protein product [Vitis vinifera]
          Length = 410

 Score =  156 bits (395), Expect = 2e-36
 Identities = 91/184 (49%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
 Frame = -2

Query: 533 QLAQRCMKHPRQMKQIHSLVITNGYLLHDPNSPSSTSTHYYNNKKWMPTLLYNALIRAXX 354
           +L Q  +KHP+Q+KQ+HSL+ITNG+LL   N+         +N KWM TLLYN+LIR   
Sbjct: 18  RLLQGLIKHPKQIKQVHSLLITNGHLLPCSNA---------SNLKWMATLLYNSLIRGYL 68

Query: 353 XXXXXXNKKVLLLFTHMLANEAPPNTHTFPPLLK---STPPSLA----TPLHSQALRRGL 195
                   K LL+FTHMLA++APPN  TFP ++K   S  PSLA    TPLH+  ++RGL
Sbjct: 69  NFVEPH--KTLLIFTHMLAHQAPPNNLTFPSIIKKAASCSPSLAFMIGTPLHTHVIKRGL 126

Query: 194 FSDPFVLTTLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTR 15
             D F+ T+L+VLYAR   +  A +VFEEI   C+V+ NAM++AL  NGDM  A  LF  
Sbjct: 127 SHDLFIQTSLVVLYARLCKVSDACRVFEEISRPCVVSSNAMLDALGKNGDMGSALFLFES 186

Query: 14  MPHR 3
           MP R
Sbjct: 187 MPER 190


>ref|XP_002332100.1| predicted protein [Populus trichocarpa] gi|222874920|gb|EEF12051.1|
           predicted protein [Populus trichocarpa]
          Length = 474

 Score =  139 bits (349), Expect = 3e-31
 Identities = 79/180 (43%), Positives = 111/180 (61%), Gaps = 3/180 (1%)
 Frame = -2

Query: 533 QLAQRCMKHPRQMKQIHSLVITNGYLLHDPNSPSSTSTHYYNNKKWMPTLLYNALIRAXX 354
           QL Q  +KH  Q+KQIHSL+ T G L ++PN+  +      +N KW  TLL+N L RA  
Sbjct: 11  QLLQHFIKHQNQVKQIHSLLTTKGLLFYNPNTSPN------DNSKWKTTLLFNTLNRAYL 64

Query: 353 XXXXXXNKKVLLLFTHMLANEAPPNTHTFPPLLKSTPPS---LATPLHSQALRRGLFSDP 183
                  ++ L LF  MLA++ PPN+HTFP ++K+   S   + T LH+QA+ RG+  DP
Sbjct: 65  NFGQH--QQTLHLFALMLAHQTPPNSHTFPSVIKAATHSCLFIGTSLHTQAINRGVLYDP 122

Query: 182 FVLTTLLVLYARNNHLDHAHKVFEEIPLFCIVACNAMINALSVNGDMEGAWSLFTRMPHR 3
           F+ T+LL +Y++  +L +A KVF+EI   CIV  NA ++A + NGDM  A  LF  MP R
Sbjct: 123 FIQTSLLGMYSQFGYLLNACKVFDEISHPCIVEYNATLDAYAKNGDMGSACCLFKSMPKR 182


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