BLASTX nr result

ID: Glycyrrhiza23_contig00013804 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013804
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540926.1| PREDICTED: pollen-specific leucine-rich repe...    89   3e-16
ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repe...    86   4e-15
ref|XP_004137033.1| PREDICTED: leucine-rich repeat extensin-like...    82   3e-14
gb|ACU18125.1| unknown [Glycine max]                                   82   6e-14
ref|XP_002314669.1| predicted protein [Populus trichocarpa] gi|2...    81   8e-14

>ref|XP_003540926.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 3-like [Glycine max]
          Length = 417

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 42/65 (64%), Positives = 45/65 (69%)
 Frame = -3

Query: 196 AKHNIANSXXXXXXXXXKNPPLNPRLYRAFLVLQAWKHVIYSDPKNFTSNWVGPSVCIYT 17
           A H  A+          +NPPLN RL  AFL LQAWK VIYSDP NFTSNWVGPSVC YT
Sbjct: 31  ANHTNASGHNHHKHQHTQNPPLNSRLDMAFLGLQAWKQVIYSDPNNFTSNWVGPSVCNYT 90

Query: 16  GIYCA 2
           G+YCA
Sbjct: 91  GVYCA 95


>ref|XP_003526272.1| PREDICTED: pollen-specific leucine-rich repeat extensin-like
           protein 3-like [Glycine max]
          Length = 419

 Score = 85.5 bits (210), Expect = 4e-15
 Identities = 42/66 (63%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
 Frame = -3

Query: 196 AKHNIANSXXXXXXXXXK-NPPLNPRLYRAFLVLQAWKHVIYSDPKNFTSNWVGPSVCIY 20
           AKH  A+S           NP LN RL+ AFL LQAWK VIYSDP NFTSNWVGPSVC Y
Sbjct: 31  AKHTNASSHNHHHKHQHTQNPSLNTRLHMAFLGLQAWKQVIYSDPNNFTSNWVGPSVCNY 90

Query: 19  TGIYCA 2
           TG++CA
Sbjct: 91  TGVFCA 96


>ref|XP_004137033.1| PREDICTED: leucine-rich repeat extensin-like protein 4-like
           [Cucumis sativus]
          Length = 401

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 35/47 (74%), Positives = 40/47 (85%)
 Frame = -3

Query: 142 NPPLNPRLYRAFLVLQAWKHVIYSDPKNFTSNWVGPSVCIYTGIYCA 2
           +P  NPRL++AFL LQAWK VIYSDPKN T+NWVGPSVC Y G+YCA
Sbjct: 38  SPNSNPRLHQAFLALQAWKRVIYSDPKNHTTNWVGPSVCNYFGVYCA 84


>gb|ACU18125.1| unknown [Glycine max]
          Length = 390

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 34/46 (73%), Positives = 38/46 (82%)
 Frame = -3

Query: 139 PPLNPRLYRAFLVLQAWKHVIYSDPKNFTSNWVGPSVCIYTGIYCA 2
           PP+NPRL +A+  LQAWKH I SDPKNFT NW GP+VC YTGIYCA
Sbjct: 39  PPINPRLTKAYTALQAWKHKITSDPKNFTLNWCGPNVCNYTGIYCA 84


>ref|XP_002314669.1| predicted protein [Populus trichocarpa] gi|222863709|gb|EEF00840.1|
           predicted protein [Populus trichocarpa]
          Length = 349

 Score = 81.3 bits (199), Expect = 8e-14
 Identities = 34/47 (72%), Positives = 40/47 (85%), Gaps = 1/47 (2%)
 Frame = -3

Query: 139 PPL-NPRLYRAFLVLQAWKHVIYSDPKNFTSNWVGPSVCIYTGIYCA 2
           PP+ NPRL +A++ LQAWKH I SDPKNFTSNW GP+VC YTG+YCA
Sbjct: 14  PPIPNPRLLKAYIALQAWKHAITSDPKNFTSNWCGPNVCNYTGVYCA 60


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