BLASTX nr result

ID: Glycyrrhiza23_contig00013799 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013799
         (1623 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago t...   536   e-150
ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   523   e-146
ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   505   e-140
ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|2...   422   e-115
ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-...   421   e-115

>ref|XP_003602483.1| F-box/kelch-repeat protein SKIP6 [Medicago truncatula]
            gi|355491531|gb|AES72734.1| F-box/kelch-repeat protein
            SKIP6 [Medicago truncatula]
          Length = 356

 Score =  536 bits (1381), Expect = e-150
 Identities = 261/349 (74%), Positives = 291/349 (83%), Gaps = 9/349 (2%)
 Frame = +2

Query: 95   HLIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTL 274
            +LIPSLPDDVA+NCLARV RS H TL+LVSKPI SLL SSLFF ARSL+  TQH+LYL+L
Sbjct: 8    NLIPSLPDDVAINCLARVPRSHHTTLTLVSKPIHSLLSSSLFFTARSLIPSTQHILYLSL 67

Query: 275  RTRASSLQWFTLHHNRXXXXXXXXXXXAIGSAYAVLGSTIYVIGGSINDIPSRQVWLLDC 454
            RTR++SLQ+FTLH+N             IGSAYAV+   IY+IGGS+ND+PSR VW+LDC
Sbjct: 68   RTRSTSLQFFTLHNNHRLLPLPPLPSPTIGSAYAVIHHKIYLIGGSVNDVPSRHVWILDC 127

Query: 455  RFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWERVPS 634
            RFHRWL GPSMRV+REFAAAGV+DGKIYVIGGCVPD F+RSANW+E  DP   RWE VPS
Sbjct: 128  RFHRWLPGPSMRVAREFAAAGVIDGKIYVIGGCVPDNFSRSANWSEVFDPVNNRWESVPS 187

Query: 635  PPEIREKWMHASAVVDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVVDGVLY 814
            PPEIREKWMHASAVVD +VYAMADRGGV+FDP +GAWESVG ELD+GWRGRA VVDG+LY
Sbjct: 188  PPEIREKWMHASAVVDGKVYAMADRGGVSFDPYNGAWESVGRELDIGWRGRATVVDGILY 247

Query: 815  CYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMADVGGKLVVVWEC-----GNGKE 976
            CYDYLG IKGFDVK+GLWKELKGL   LPRFLCGATMADVGGKLVVVWEC     G GKE
Sbjct: 248  CYDYLGKIKGFDVKKGLWKELKGLDKSLPRFLCGATMADVGGKLVVVWECQRNLNGKGKE 307

Query: 977  MEIWGAEIEVNKNE---DDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 1114
            MEIW AEI+V K +    DGELWGEV W N VLS P+GSSIVHC++VAL
Sbjct: 308  MEIWCAEIDVKKKKKKNKDGELWGEVCWLNNVLSVPKGSSIVHCNSVAL 356


>ref|XP_003523259.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 359

 Score =  523 bits (1346), Expect = e-146
 Identities = 258/345 (74%), Positives = 288/345 (83%), Gaps = 5/345 (1%)
 Frame = +2

Query: 95   HLIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTL 274
            +LIP LP+DVA+NCLAR+ RS H TLSLVSKPIRSLL S L F  RSLL CTQ LLYLTL
Sbjct: 16   NLIPYLPNDVALNCLARIPRSHHPTLSLVSKPIRSLLYSPLLFTTRSLLQCTQPLLYLTL 75

Query: 275  RTRASSLQWFTLHH---NRXXXXXXXXXXXAIGSAYAVLGSTIYVIGGSINDIPSRQVWL 445
            R+R SSLQWFTLH    N            A+GSAYAVLG TIYV+GGSI D+PS  VWL
Sbjct: 76   RSRDSSLQWFTLHRTNPNPLLAPLPPIPSPAVGSAYAVLGPTIYVLGGSIQDVPSSHVWL 135

Query: 446  LDCRFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWER 625
            LDCRFHRWL+GP MRV+REFAAAGV+ GKIYV+GGCV DT++RSANWAE LDPA+GRWER
Sbjct: 136  LDCRFHRWLRGPPMRVAREFAAAGVLHGKIYVLGGCVADTWSRSANWAEVLDPASGRWER 195

Query: 626  VPSPPEIREKWMHASAVVDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVVDG 805
            V SP E+REKWMHASAVV DR+YAMADRGG+AF+PRS AWESVG ELD GWRGRACVV+G
Sbjct: 196  VASPTEVREKWMHASAVVGDRIYAMADRGGIAFEPRSCAWESVGGELDHGWRGRACVVEG 255

Query: 806  VLYCYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMADVGGKLVVVWECG-NGKEM 979
            +LYCYDYLG IKGFDV RG+W+ELKGL   LPRFLCGATMAD+GGKL VVWEC  NGKEM
Sbjct: 256  ILYCYDYLGKIKGFDVGRGVWEELKGLENALPRFLCGATMADLGGKLCVVWECQCNGKEM 315

Query: 980  EIWGAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 1114
            EIW AEI V KN  DGELWG++GWF KVLS P+GSSIV+CS+V+L
Sbjct: 316  EIWCAEIGVKKN-SDGELWGQLGWFGKVLSVPKGSSIVNCSSVSL 359


>ref|XP_003526831.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Glycine max]
          Length = 362

 Score =  505 bits (1300), Expect = e-140
 Identities = 255/364 (70%), Positives = 293/364 (80%), Gaps = 7/364 (1%)
 Frame = +2

Query: 44   SSSEVEAEAGVXXXXXXHLIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFF 223
            S SE E  A        +LIPSLPDDVA+NCL R+ RS+H TLSLVSKPIR+LL S + F
Sbjct: 5    SGSESEESAS-----PNNLIPSLPDDVALNCLGRIPRSQHPTLSLVSKPIRTLLSSPILF 59

Query: 224  NARSLLHCTQHLLYLTLRTRASSL-QWFTLH----HNRXXXXXXXXXXXAIGSAYAVLGS 388
              R+LL CTQ LLYLTLR+R SSL Q+FTLH    +N            A+GSAYAVLG 
Sbjct: 60   TTRTLLQCTQPLLYLTLRSRHSSLLQFFTLHRTNPNNPLLAPLPPIPSPAVGSAYAVLGP 119

Query: 389  TIYVIGGSINDIPSRQVWLLDCRFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTF 568
            TIYV+GGSI+D+PS  VWLLDCRF+RWL+GPSMRV REFAAAGV+ GKIYV+GGCV DT+
Sbjct: 120  TIYVLGGSIHDVPSPNVWLLDCRFNRWLRGPSMRVGREFAAAGVLHGKIYVLGGCVADTW 179

Query: 569  ARSANWAEFLDPAAGRWERVPSPPEIREKWMHASAVVDDRVYAMADRGGVAFDPRSGAWE 748
            +RSANWAE LDPA G+WERV SP E+REKWMHASAVV +R+YAMADRGG+A++P SGAWE
Sbjct: 180  SRSANWAEVLDPATGQWERVASPTEVREKWMHASAVVGERIYAMADRGGIAYEPSSGAWE 239

Query: 749  SVGTELDLGWRGRACVVDGVLYCYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMA 925
            SVG ELD GWRGRACVV+G+LYCYDYLG IKGFDV RG+W+ELKGL   LPRFLCGATMA
Sbjct: 240  SVGVELDHGWRGRACVVEGILYCYDYLGKIKGFDVGRGVWEELKGLEKGLPRFLCGATMA 299

Query: 926  DVGGKLVVVWEC-GNGKEMEIWGAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCS 1102
            D+GGKL VVWEC GN  EMEIW AEI V KN  DGELWG++ WF KVLS P+GSSIV+CS
Sbjct: 300  DLGGKLCVVWECQGNENEMEIWCAEIGVKKN-SDGELWGQLVWFGKVLSVPKGSSIVNCS 358

Query: 1103 AVAL 1114
            +V+L
Sbjct: 359  SVSL 362


>ref|XP_002310029.1| predicted protein [Populus trichocarpa] gi|222852932|gb|EEE90479.1|
            predicted protein [Populus trichocarpa]
          Length = 362

 Score =  422 bits (1084), Expect = e-115
 Identities = 215/347 (61%), Positives = 261/347 (75%), Gaps = 8/347 (2%)
 Frame = +2

Query: 98   LIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTLR 277
            LIPSLP+D+A+N LAR+ RS H  L+LVSKP RS+L S L +  RSLL+ +QH LYL+LR
Sbjct: 17   LIPSLPNDIALNILARIPRSYHPRLTLVSKPFRSILSSPLLYTTRSLLNTSQHFLYLSLR 76

Query: 278  T-RASSLQWFTLHHNRXXXXXXXXXXXA---IGSAYAVLGSTIYVIGGSINDIPSRQVWL 445
                +SLQWFTL+ ++               +GSA+A +G  IYVIGGSINDIPS  VW 
Sbjct: 77   IPTTTSLQWFTLYPDQTKNSLIPLTPAPSPLVGSAFAAVGPKIYVIGGSINDIPSPHVWA 136

Query: 446  LDCRFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWER 625
            LDCR H W   PSMR+SREFAAAGVVDG+IYVIGGCV DT+A+S NWAE  DP   RW+ 
Sbjct: 137  LDCRSHTWEAVPSMRISREFAAAGVVDGRIYVIGGCVVDTWAKSRNWAEVFDPKTERWDS 196

Query: 626  VPSPPE--IREKWMHASAVVDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVV 799
            V S  +  +REKWMH SAVV++R+Y MADR GV ++P++  WESV +ELDLGWRGRACVV
Sbjct: 197  VDSGKDDLLREKWMHGSAVVNERIYVMADRNGVVYEPKTKRWESVESELDLGWRGRACVV 256

Query: 800  DGVLYCYDYLGNIKGFDVKRGLWKELKGLYC-LPRFLCGATMADVGGKLVVVWE-CGNGK 973
            +G+LYCYDY+GNI+GFDV+ G WKEL+G+   LPRFLCGATMA+VGGKLVVVWE  GN K
Sbjct: 257  NGILYCYDYVGNIRGFDVRNGAWKELRGVEKELPRFLCGATMANVGGKLVVVWERKGNVK 316

Query: 974  EMEIWGAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 1114
            EME+W AEIEV +N  +GEL G V W + V   P GSSIVHC AV++
Sbjct: 317  EMEVWCAEIEVEEN-GEGELRGRVEWCDVVHKVPIGSSIVHCLAVSM 362


>ref|XP_002276023.1| PREDICTED: F-box/kelch-repeat protein SKIP6-like [Vitis vinifera]
          Length = 361

 Score =  421 bits (1081), Expect = e-115
 Identities = 217/342 (63%), Positives = 255/342 (74%), Gaps = 3/342 (0%)
 Frame = +2

Query: 98   LIPSLPDDVAVNCLARVHRSEHGTLSLVSKPIRSLLCSSLFFNARSLLHCTQHLLYLTLR 277
            LIP+LPDDVA+ C+ARV RS H  L LV K  RS+L S  FF+ RSLL+C QH LYL +R
Sbjct: 22   LIPNLPDDVALQCIARVPRSRHPHLLLVCKSWRSILNSPDFFSTRSLLNCMQHSLYLIVR 81

Query: 278  TRASSLQWFTLHHN-RXXXXXXXXXXXAIGSAYAVLGSTIYVIGGSINDIPSRQVWLLDC 454
               + L+WF L+ N R           AIGSA+A +GS I+V+GGS+ND+ S  V + DC
Sbjct: 82   VNCT-LKWFVLNQNPRILASLPPNPSPAIGSAFAAIGSKIFVLGGSVNDVASPTVQVFDC 140

Query: 455  RFHRWLQGPSMRVSREFAAAGVVDGKIYVIGGCVPDTFARSANWAEFLDPAAGRWERVPS 634
            RF  W  GP MRV REFAAAGVV  KIYV+GGC+ DT+A+SANWAE  DPAAGRW  V S
Sbjct: 141  RFGTWELGPRMRVGREFAAAGVVGRKIYVMGGCLVDTWAKSANWAEVFDPAAGRWAGVES 200

Query: 635  PPEIREKWMHASAVVDDRVYAMADRGGVAFDPRSGAWESVGTELDLGWRGRACVVDGVLY 814
            P E+REKWMHASAVV++++YAMADRGGV F+P +  W  V TELDLGWRGRACVVDGVLY
Sbjct: 201  PVEVREKWMHASAVVEEKIYAMADRGGVVFEPGTAEWGGVSTELDLGWRGRACVVDGVLY 260

Query: 815  CYDYLGNIKGFDVKRGLWKELKGL-YCLPRFLCGATMADVGGKLVVVWE-CGNGKEMEIW 988
            CYDYLG I+GFDVK GLWKELKGL   LP+FLCGATMA+VGG LVV+WE  GNGKEMEI 
Sbjct: 261  CYDYLGKIRGFDVKEGLWKELKGLEKGLPKFLCGATMANVGGNLVVLWEGKGNGKEMEIS 320

Query: 989  GAEIEVNKNEDDGELWGEVGWFNKVLSAPRGSSIVHCSAVAL 1114
             AEI + K  D G L G + W + +LS P GS+IVHC AVA+
Sbjct: 321  CAEIAIQKCSDGG-LRGSIVWSDVILSVPIGSAIVHCLAVAV 361


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