BLASTX nr result

ID: Glycyrrhiza23_contig00013779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013779
         (1125 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helica...   600   e-169
emb|CBI18267.3| unnamed protein product [Vitis vinifera]              524   e-146
ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helica...   524   e-146
ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helica...   506   e-141
ref|XP_004135377.1| PREDICTED: probable ATP-dependent RNA helica...   506   e-141

>ref|XP_003530375.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Glycine
            max]
          Length = 1161

 Score =  600 bits (1548), Expect = e-169
 Identities = 317/387 (81%), Positives = 331/387 (85%), Gaps = 17/387 (4%)
 Frame = +2

Query: 14   AASFLIARAKCLQLH------CVP-----STSKTPLFRFQPSLLSSF------IPTRLFS 142
            AAS LIARAK LQLH      C P     S +   LFRF    LSS       I TRLFS
Sbjct: 8    AASLLIARAKSLQLHHRHVRHCFPPFSSSSATSISLFRFHHPWLSSLCNAKSLITTRLFS 67

Query: 143  GSGYYALEQFSDDEYDCDFENHQASSTEANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRD 322
               YY+LEQFSDDEYDCDFEN QASST ANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRD
Sbjct: 68   S--YYSLEQFSDDEYDCDFENQQASSTVANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRD 125

Query: 323  YEQIANLAKRMGLYSEMFGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQ 502
            YEQIANLAKRMGLYSE+FGKV+VASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQ
Sbjct: 126  YEQIANLAKRMGLYSELFGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQ 185

Query: 503  EYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLEGNADSLVDESVMEKVLQKRSLRMRNMQR 682
            EYLDRLQLNS KTTD LD + STNQVKDI+++ NADS VDESVMEKVLQKRSLRMRNMQR
Sbjct: 186  EYLDRLQLNSAKTTDSLDDVNSTNQVKDINMDENADSFVDESVMEKVLQKRSLRMRNMQR 245

Query: 683  AWKESPEGRKMLEFRKSLPSFREKEGLLQAIARNQVIVISGETGCGKTTQLPQYVLESEI 862
            AW+ESPEGRK+LEFRKSLPSF+EK+GLLQAIA NQVIVISGETGCGKTTQLP YVLESE+
Sbjct: 246  AWQESPEGRKLLEFRKSLPSFKEKQGLLQAIAHNQVIVISGETGCGKTTQLPHYVLESEV 305

Query: 863  ESGRGAFCSIICTQPRRISAMAVAERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTS 1042
            ESGRGAFCSIICTQPRRISAMAVAERVSAERGE LGETVGFKVRLEGM+GKNTHLLFCTS
Sbjct: 306  ESGRGAFCSIICTQPRRISAMAVAERVSAERGEPLGETVGFKVRLEGMKGKNTHLLFCTS 365

Query: 1043 GIXXXXXXXXXXXXGITHVFVDEIHER 1123
            GI            GITHVFVDEIHER
Sbjct: 366  GILLRRLLSDRNLNGITHVFVDEIHER 392


>emb|CBI18267.3| unnamed protein product [Vitis vinifera]
          Length = 1162

 Score =  524 bits (1350), Expect = e-146
 Identities = 266/355 (74%), Positives = 300/355 (84%), Gaps = 2/355 (0%)
 Frame = +2

Query: 65   PSTSKTPLFRFQPSLL--SSFIPTRLFSGSGYYALEQFSDDEYDCDFENHQASSTEANVD 238
            P  S+ P F F  SL   SSFI  R   G   YA EQFSDDEYDCDFE+H+ASS+ AN+D
Sbjct: 16   PRLSRPPTFSFLSSLPTPSSFIRRRGLCG---YAAEQFSDDEYDCDFESHKASSSVANID 72

Query: 239  EWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSEMFGKVIVASKVPLPNY 418
            EWKWKLS+L R+E+DQEIVSRD+KDRRDYEQI+NLA RMGLYSE++GKV+V SKVPLPNY
Sbjct: 73   EWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQISNLANRMGLYSEIYGKVMVVSKVPLPNY 132

Query: 419  RPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLE 598
            RPDLDDKRPQREVVIPLSLQRRVEGLLQE+LDR+ L+S K +D  D        +D++ E
Sbjct: 133  RPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRMLLSSGKVSDCSDDANGNGGFEDVNPE 192

Query: 599  GNADSLVDESVMEKVLQKRSLRMRNMQRAWKESPEGRKMLEFRKSLPSFREKEGLLQAIA 778
             N DSL+D SVMEKVLQ+RSLRMRNMQRAW+ESPEG+KML+FRKSLP+FREKE LLQAIA
Sbjct: 193  DNPDSLLDGSVMEKVLQRRSLRMRNMQRAWQESPEGKKMLDFRKSLPAFREKERLLQAIA 252

Query: 779  RNQVIVISGETGCGKTTQLPQYVLESEIESGRGAFCSIICTQPRRISAMAVAERVSAERG 958
            RNQV+V+SGETGCGKTTQLPQY+LESEIESGRGAFCSIICTQPRRISAM+V+ERVS ERG
Sbjct: 253  RNQVVVVSGETGCGKTTQLPQYILESEIESGRGAFCSIICTQPRRISAMSVSERVSTERG 312

Query: 959  ESLGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHER 1123
            E LGE+VG+KVRLEGM+GKNTHLLFCTSGI            GITHVFVDEIHER
Sbjct: 313  EPLGESVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHER 367


>ref|XP_002269787.1| PREDICTED: probable ATP-dependent RNA helicase DHX36 [Vitis vinifera]
          Length = 1136

 Score =  524 bits (1350), Expect = e-146
 Identities = 266/355 (74%), Positives = 300/355 (84%), Gaps = 2/355 (0%)
 Frame = +2

Query: 65   PSTSKTPLFRFQPSLL--SSFIPTRLFSGSGYYALEQFSDDEYDCDFENHQASSTEANVD 238
            P  S+ P F F  SL   SSFI  R   G   YA EQFSDDEYDCDFE+H+ASS+ AN+D
Sbjct: 16   PRLSRPPTFSFLSSLPTPSSFIRRRGLCG---YAAEQFSDDEYDCDFESHKASSSVANID 72

Query: 239  EWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKRMGLYSEMFGKVIVASKVPLPNY 418
            EWKWKLS+L R+E+DQEIVSRD+KDRRDYEQI+NLA RMGLYSE++GKV+V SKVPLPNY
Sbjct: 73   EWKWKLSLLSRNEQDQEIVSRDKKDRRDYEQISNLANRMGLYSEIYGKVMVVSKVPLPNY 132

Query: 419  RPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLE 598
            RPDLDDKRPQREVVIPLSLQRRVEGLLQE+LDR+ L+S K +D  D        +D++ E
Sbjct: 133  RPDLDDKRPQREVVIPLSLQRRVEGLLQEHLDRMLLSSGKVSDCSDDANGNGGFEDVNPE 192

Query: 599  GNADSLVDESVMEKVLQKRSLRMRNMQRAWKESPEGRKMLEFRKSLPSFREKEGLLQAIA 778
             N DSL+D SVMEKVLQ+RSLRMRNMQRAW+ESPEG+KML+FRKSLP+FREKE LLQAIA
Sbjct: 193  DNPDSLLDGSVMEKVLQRRSLRMRNMQRAWQESPEGKKMLDFRKSLPAFREKERLLQAIA 252

Query: 779  RNQVIVISGETGCGKTTQLPQYVLESEIESGRGAFCSIICTQPRRISAMAVAERVSAERG 958
            RNQV+V+SGETGCGKTTQLPQY+LESEIESGRGAFCSIICTQPRRISAM+V+ERVS ERG
Sbjct: 253  RNQVVVVSGETGCGKTTQLPQYILESEIESGRGAFCSIICTQPRRISAMSVSERVSTERG 312

Query: 959  ESLGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHER 1123
            E LGE+VG+KVRLEGM+GKNTHLLFCTSGI            GITHVFVDEIHER
Sbjct: 313  EPLGESVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSDRNLNGITHVFVDEIHER 367


>ref|XP_004162736.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1144

 Score =  506 bits (1304), Expect = e-141
 Identities = 249/336 (74%), Positives = 294/336 (87%)
 Frame = +2

Query: 116  SFIPTRLFSGSGYYALEQFSDDEYDCDFENHQASSTEANVDEWKWKLSMLLRSEKDQEIV 295
            S+  +R++  S +YA EQFSDDEY+CD +N+ ASS+ AN+DEWKWKLS+L R+EKDQEIV
Sbjct: 42   SYSVSRVWRCSYHYAAEQFSDDEYECDGDNNTASSSVANIDEWKWKLSLLSRNEKDQEIV 101

Query: 296  SRDRKDRRDYEQIANLAKRMGLYSEMFGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSL 475
            SRD +DRRD+EQI+NLAK+MGLY  M+GKV+VASKVPLPNYRPDLDDKRPQREVVIPLSL
Sbjct: 102  SRDNRDRRDFEQISNLAKKMGLYCSMYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSL 161

Query: 476  QRRVEGLLQEYLDRLQLNSEKTTDYLDSMKSTNQVKDIDLEGNADSLVDESVMEKVLQKR 655
            QRRVEGLLQE+ DR++L+S K +D  + +KS  +VKD++++   D  +D SVMEKVLQ+R
Sbjct: 162  QRRVEGLLQEHCDRIRLSSGKGSDIPNDVKSIEEVKDVNMDECEDPYLDGSVMEKVLQRR 221

Query: 656  SLRMRNMQRAWKESPEGRKMLEFRKSLPSFREKEGLLQAIARNQVIVISGETGCGKTTQL 835
            SLRMRNMQRAW+ESPEGRK+L+FR+SLP+F+EKE LLQAIA NQV+VISGETGCGKTTQL
Sbjct: 222  SLRMRNMQRAWQESPEGRKILDFRRSLPAFKEKEKLLQAIAENQVVVISGETGCGKTTQL 281

Query: 836  PQYVLESEIESGRGAFCSIICTQPRRISAMAVAERVSAERGESLGETVGFKVRLEGMRGK 1015
            PQY+LESEIE+GRGAFCSIICTQPRRISAMAV+ERVS ERGESLGETVG+KVRLEGM+GK
Sbjct: 282  PQYLLESEIETGRGAFCSIICTQPRRISAMAVSERVSIERGESLGETVGYKVRLEGMKGK 341

Query: 1016 NTHLLFCTSGIXXXXXXXXXXXXGITHVFVDEIHER 1123
            NTHLLFCTSGI            G+THVFVDEIHER
Sbjct: 342  NTHLLFCTSGILLRRLLSDRNLDGVTHVFVDEIHER 377


>ref|XP_004135377.1| PREDICTED: probable ATP-dependent RNA helicase DHX36-like [Cucumis
            sativus]
          Length = 1144

 Score =  506 bits (1302), Expect = e-141
 Identities = 258/377 (68%), Positives = 310/377 (82%), Gaps = 3/377 (0%)
 Frame = +2

Query: 2    NPKSAASFLIARAKCLQLHCVPSTSKTPLFRFQPSLLS---SFIPTRLFSGSGYYALEQF 172
            N K   +FL+  +K   + C  S++     R    LL    S+  +R++  S +YA EQF
Sbjct: 3    NIKRLPNFLLVLSK--NISCDLSSNHGLAVRPLKLLLQQSRSYSVSRVWRCSYHYAAEQF 60

Query: 173  SDDEYDCDFENHQASSTEANVDEWKWKLSMLLRSEKDQEIVSRDRKDRRDYEQIANLAKR 352
            SDDEY+CD +N+ ASS+ AN+DEWKWKLS+L R+E+DQEIVSRD +DRRD+EQI+NLAK+
Sbjct: 61   SDDEYECDGDNNTASSSVANIDEWKWKLSLLSRNERDQEIVSRDNRDRRDFEQISNLAKK 120

Query: 353  MGLYSEMFGKVIVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEYLDRLQLNS 532
            MGLY  M+GKV+VASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQE+ DR++L+S
Sbjct: 121  MGLYCSMYGKVVVASKVPLPNYRPDLDDKRPQREVVIPLSLQRRVEGLLQEHCDRIRLSS 180

Query: 533  EKTTDYLDSMKSTNQVKDIDLEGNADSLVDESVMEKVLQKRSLRMRNMQRAWKESPEGRK 712
             K +D  + +KS  +VKD++++   D  +D SVMEKVLQ+RSLRMRNMQRAW+ESPEGRK
Sbjct: 181  GKGSDIPNDVKSIEEVKDVNMDECEDPYLDGSVMEKVLQRRSLRMRNMQRAWQESPEGRK 240

Query: 713  MLEFRKSLPSFREKEGLLQAIARNQVIVISGETGCGKTTQLPQYVLESEIESGRGAFCSI 892
            +L+FR+SLP+F+EKE LLQAIA NQV+VISGETGCGKTTQLPQY+LESEIE+GRGAFCSI
Sbjct: 241  ILDFRRSLPAFKEKEKLLQAIAENQVVVISGETGCGKTTQLPQYLLESEIETGRGAFCSI 300

Query: 893  ICTQPRRISAMAVAERVSAERGESLGETVGFKVRLEGMRGKNTHLLFCTSGIXXXXXXXX 1072
            ICTQPRRISAMAV+ERVS ERGESLGETVG+KVRLEGM+GKNTHLLFCTSGI        
Sbjct: 301  ICTQPRRISAMAVSERVSIERGESLGETVGYKVRLEGMKGKNTHLLFCTSGILLRRLLSD 360

Query: 1073 XXXXGITHVFVDEIHER 1123
                G+THVFVDEIHER
Sbjct: 361  RNLDGVTHVFVDEIHER 377


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