BLASTX nr result

ID: Glycyrrhiza23_contig00013720 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013720
         (1701 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding prote...   571   e-160
ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote...   565   e-158
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   563   e-158
ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional ...   554   e-155
ref|XP_002510266.1| nuclear acid binding protein, putative [Rici...   530   e-148

>ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
            [Glycine max]
          Length = 409

 Score =  571 bits (1472), Expect = e-160
 Identities = 292/398 (73%), Positives = 307/398 (77%)
 Frame = +2

Query: 170  SSNGSDSXXXXXXXXXXXXXXXXXXXVALPQQWLPMQYPAAAMVMQHXXXXXXXXXXXXX 349
            +SNGSDS                   VA+P QW+PMQYPAAAMVMQH             
Sbjct: 4    TSNGSDSKATEQRTPPPQP-------VAVPPQWMPMQYPAAAMVMQHHMMPPQHYAPPQP 56

Query: 350  XXXXXXXXXXXXXXXXXXXXXXGSSAENKTIWVGDLHHWMDENYLHRCFASTGEISSIKV 529
                                  GSSAENKT+WVGDLHHWMDENYLHRCFASTGEISSIKV
Sbjct: 57   YMAYHQYQQQVPQAHHL-----GSSAENKTVWVGDLHHWMDENYLHRCFASTGEISSIKV 111

Query: 530  IRNKQTGLSEGYGFVEFYSHGTAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVP 709
            IRNKQTGLSEGYGFVEFYSHGTA+KVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVP
Sbjct: 112  IRNKQTGLSEGYGFVEFYSHGTADKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVP 171

Query: 710  DLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQA 889
            DLSIFVGDLAADVTDSMLHETF+NRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQA
Sbjct: 172  DLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQA 231

Query: 890  MTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTA 1069
            MTEMNGVYCSSRPMRIGAATPRK                 EADSTNTTIFVGGLDPNVTA
Sbjct: 232  MTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQSNGTSSQSEADSTNTTIFVGGLDPNVTA 291

Query: 1070 EDLRQPFSQYGEIVSVKIPIGKGCGFVQFANRNHAEEALQKLNGTKIGKQTVRLSWGRNP 1249
            EDL+QPFSQYGEIVSVKIP+GKGCGFVQFANRN+AEEALQKLNGT IGKQ VRLSWGR+P
Sbjct: 292  EDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTTIGKQMVRLSWGRSP 351

Query: 1250 ANKQFRMDFGSPWTXXXXXXXXXXXXXXAMPHPHDPSM 1363
            ANKQFR DFG+ W+              A+P P+DPS+
Sbjct: 352  ANKQFRADFGNAWSGAYYGGPVYDGYGYALPPPYDPSI 389


>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
            [Glycine max]
          Length = 425

 Score =  565 bits (1457), Expect = e-158
 Identities = 295/429 (68%), Positives = 308/429 (71%), Gaps = 10/429 (2%)
 Frame = +2

Query: 164  MQSSNGSDSXXXXXXXXXXXXXXXXXXXVALPQQWLPMQYPAAAMVMQHXXXXXXXXXXX 343
            MQ SNGSDS                   VA PQQWLPMQYPAAAMVM H           
Sbjct: 1    MQQSNGSDSSTTEQKAPPPRQSPA----VARPQQWLPMQYPAAAMVMPHHMLPPQHYAPP 56

Query: 344  XXXXXXXXXXXXXXXXXXXXXXXX----------GSSAENKTIWVGDLHHWMDENYLHRC 493
                                              GS  ENKTIW+GDLHHWMDENYLHRC
Sbjct: 57   PYVPFHHHHHHHQYAAPHVPNQHQQQQQHHHHQNGSGGENKTIWIGDLHHWMDENYLHRC 116

Query: 494  FASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQNYAGILMPNTEQPFRLNWAT 673
            FASTGEISSIKVIRNKQTGLSEGYGFVEFYSH TAEKVLQNYAGILMPNTEQPFRLNWAT
Sbjct: 117  FASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILMPNTEQPFRLNWAT 176

Query: 674  FSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVVFDANTGRSKGYGF 853
            FSTGDK SDNVPDLSIFVGDLAADVTDS+LHETF++ YPSVKAAKVVFDANTGRSKGYGF
Sbjct: 177  FSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGF 236

Query: 854  VRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXXXXXXXXXXXXXXXXXEADSTNTT 1033
            VRFGDDN+R+QAMT+MNGVYCSSRPMRIGAATPRK                 EADSTNTT
Sbjct: 237  VRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTT 296

Query: 1034 IFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPIGKGCGFVQFANRNHAEEALQKLNGTKIG 1213
            IFVGGLDPNV+ EDLRQPFSQYGEIVSVKIP+GKGCGFVQFANRN+AEEALQKLNGT IG
Sbjct: 297  IFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNGTSIG 356

Query: 1214 KQTVRLSWGRNPANKQFRMDFGSPWTXXXXXXXXXXXXXXAMPHPHDPSMXXXXXXXXXX 1393
            KQTVRLSWGRNPANKQFRMDFG+PWT              A+   HDPS+          
Sbjct: 357  KQTVRLSWGRNPANKQFRMDFGNPWTGAYYGAPMYDGYGYALTPRHDPSIYAAAYGAYPL 416

Query: 1394 XXXHQQQVS 1420
               HQQQVS
Sbjct: 417  YGGHQQQVS 425


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 401

 Score =  563 bits (1450), Expect = e-158
 Identities = 288/392 (73%), Positives = 300/392 (76%), Gaps = 1/392 (0%)
 Frame = +2

Query: 248  VALPQQWLPMQYPAAA-MVMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSS 424
            VA PQQW+PMQYPAAA MVM H                                   GS 
Sbjct: 15   VARPQQWVPMQYPAAAAMVMPHHMLPPQHYAPPPYVPYHHQYAAQPQHQHQN-----GSG 69

Query: 425  AENKTIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEK 604
             ENKTIW+GDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSH TAEK
Sbjct: 70   GENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEK 129

Query: 605  VLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNR 784
            VLQNYAGILMPN EQPFRLNWATFSTGDK SDNVPDLSIFVGDLAADVTDS+LHETF++ 
Sbjct: 130  VLQNYAGILMPNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV 189

Query: 785  YPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXX 964
            YPSVKAAKVVFDANTGRSKGYGFVRFGDDNER+QAMT+MNGVYCSSRPMRIGAATPRK  
Sbjct: 190  YPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSS 249

Query: 965  XXXXXXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPIGKGCG 1144
                           EADSTNTTIFVGGLDPNV+ EDLRQPFSQYGEIVSVKIP+GKGCG
Sbjct: 250  GHQQGGLSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 309

Query: 1145 FVQFANRNHAEEALQKLNGTKIGKQTVRLSWGRNPANKQFRMDFGSPWTXXXXXXXXXXX 1324
            FVQFANRN+AEEALQKLNGT IGKQTVRLSWGRNPANKQFRMDFGSPWT           
Sbjct: 310  FVQFANRNNAEEALQKLNGTTIGKQTVRLSWGRNPANKQFRMDFGSPWTGAYYGAPMYDG 369

Query: 1325 XXXAMPHPHDPSMXXXXXXXXXXXXXHQQQVS 1420
               A+P  HDPS+             HQQQVS
Sbjct: 370  YGYALPPRHDPSIYAAAYGAYPLYGGHQQQVS 401


>ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
            [Glycine max]
          Length = 410

 Score =  554 bits (1427), Expect = e-155
 Identities = 283/392 (72%), Positives = 295/392 (75%), Gaps = 4/392 (1%)
 Frame = +2

Query: 257  PQQWLPMQYPAAAMVMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSSAENK 436
            P QW+PMQYPAAAMVMQH                                   GSSAENK
Sbjct: 19   PPQWMPMQYPAAAMVMQHHMMPPQHYAPPPPQPYMAYHHYQQQLPHALHAHHQGSSAENK 78

Query: 437  TIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQN 616
            T+WVGDLHHWMDENYLHRCFAS GEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQN
Sbjct: 79   TVWVGDLHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQN 138

Query: 617  YAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSV 796
            YAGILMPNTEQPFRLNWATF TGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSV
Sbjct: 139  YAGILMPNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSV 198

Query: 797  KAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKXXXXXX 976
            KAAKVVFDANTGRSKGYGFVRFGDD+ERSQAMTEMNGVYCSSRPMRIGAATPRK      
Sbjct: 199  KAAKVVFDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQ 258

Query: 977  XXXXXXXXXXXEADSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVSVKIPIGKGCGFVQF 1156
                       EADSTNTTIFVGGLD NVTAEDL+QPFSQYGEIVSVKIP+GKGCGF   
Sbjct: 259  GSQSNGISSQSEADSTNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFTIC 318

Query: 1157 ANRN----HAEEALQKLNGTKIGKQTVRLSWGRNPANKQFRMDFGSPWTXXXXXXXXXXX 1324
             +R+    +AEEALQKLNGT IGKQ VRLSWGRNPANKQFR DFG+ W+           
Sbjct: 319  NSRSPGPKNAEEALQKLNGTTIGKQMVRLSWGRNPANKQFRADFGNAWSGAYYGGPVYDG 378

Query: 1325 XXXAMPHPHDPSMXXXXXXXXXXXXXHQQQVS 1420
               A+P  HDPS+             HQQQVS
Sbjct: 379  YGYALPPSHDPSIYAAAYGAYPIYGGHQQQVS 410


>ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
            gi|223550967|gb|EEF52453.1| nuclear acid binding protein,
            putative [Ricinus communis]
          Length = 443

 Score =  530 bits (1365), Expect = e-148
 Identities = 275/403 (68%), Positives = 291/403 (72%), Gaps = 16/403 (3%)
 Frame = +2

Query: 260  QQWLPMQYPAAAMVMQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------- 415
            QQW+ MQYPAAAMVMQH                                           
Sbjct: 41   QQWMAMQYPAAAMVMQHQMLPPQHYAPPPPQHYMTAYHQYHHHHPHPHQPQQHHQNQGSS 100

Query: 416  --GSSAENKTIWVGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSH 589
              G   EN+T+W+GDLHHWMDENYLH CFASTGEI SIKVIRNKQTGLSEGYGFVEFY+H
Sbjct: 101  GGGGGGENRTVWIGDLHHWMDENYLHTCFASTGEIVSIKVIRNKQTGLSEGYGFVEFYTH 160

Query: 590  GTAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHE 769
             TAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDN PDLSIFVGDLAADVTDS+LHE
Sbjct: 161  ATAEKVLQNYAGILMPNTEQPFRLNWATFSTGDKRSDNAPDLSIFVGDLAADVTDSLLHE 220

Query: 770  TFSNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAAT 949
            TF +RYPSVKAAKVVFDANTGRSKGYGFVRFGDDNER+QAMTEMNGVYCSSR MRIGAAT
Sbjct: 221  TFVSRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERTQAMTEMNGVYCSSRAMRIGAAT 280

Query: 950  PRKXXXXXXXXXXXXXXXXXEA-----DSTNTTIFVGGLDPNVTAEDLRQPFSQYGEIVS 1114
            PRK                 +A     DSTNTTIFVGGLDPNVT EDL+QPFSQYGEIVS
Sbjct: 281  PRKSTGYQHQGGYVSNGASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVS 340

Query: 1115 VKIPIGKGCGFVQFANRNHAEEALQKLNGTKIGKQTVRLSWGRNPANK-QFRMDFGSPWT 1291
            VKIP+GKGCGFVQFA+R++AEEALQKLNGT IGKQTVRLSWGRNPANK Q R DFG+ W 
Sbjct: 341  VKIPVGKGCGFVQFASRSNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWG 400

Query: 1292 XXXXXXXXXXXXXXAMPHPHDPSMXXXXXXXXXXXXXHQQQVS 1420
                          A+P PHDPSM             HQQQVS
Sbjct: 401  GAYYGGQIYDGYGYALPPPHDPSMYAAPYGAYPVYGSHQQQVS 443


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