BLASTX nr result

ID: Glycyrrhiza23_contig00013692 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013692
         (321 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628710.1| Pentatricopeptide repeat-containing protein ...   208   3e-52
ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat...   205   4e-51
ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|2...   180   9e-44
ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat...   178   4e-43
ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat...   172   2e-41

>ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355522732|gb|AET03186.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  208 bits (530), Expect = 3e-52
 Identities = 96/107 (89%), Positives = 104/107 (97%)
 Frame = -1

Query: 321 PDAIGWATLLSSCRFFGNMEIGKWAAEFLMELEPHNTASYVLLSSIYAAKGKWEEVAKLR 142
           PDAI WATLLSSCRF+GNM+IGKWAAEFLMEL+PHNTASYVLLSS+YAAKGKWEEVA+LR
Sbjct: 543 PDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEEVARLR 602

Query: 141 KGMRDKGLRKEPGCSWIKYKNQVHIFSAHDQSSPFSDQIYSELEKLN 1
           K MRDKGLRKEPGCSWIKYKNQVH+FSA D+S+PFSDQIYSELEKLN
Sbjct: 603 KDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLN 649


>ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  205 bits (521), Expect = 4e-51
 Identities = 97/107 (90%), Positives = 102/107 (95%)
 Frame = -1

Query: 321 PDAIGWATLLSSCRFFGNMEIGKWAAEFLMELEPHNTASYVLLSSIYAAKGKWEEVAKLR 142
           PDAIGWA+LLSSCRF  NMEIGKWAAE L++LEPHNTASY+LLSSIYAAKGKWEEVA LR
Sbjct: 542 PDAIGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLR 601

Query: 141 KGMRDKGLRKEPGCSWIKYKNQVHIFSAHDQSSPFSDQIYSELEKLN 1
           KGMRDKGLRKEPGCSWIKYKNQVHIFSA DQS+PFSDQIYSELEKLN
Sbjct: 602 KGMRDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLN 648


>ref|XP_002314911.1| predicted protein [Populus trichocarpa] gi|222863951|gb|EEF01082.1|
           predicted protein [Populus trichocarpa]
          Length = 743

 Score =  180 bits (457), Expect = 9e-44
 Identities = 84/107 (78%), Positives = 96/107 (89%)
 Frame = -1

Query: 321 PDAIGWATLLSSCRFFGNMEIGKWAAEFLMELEPHNTASYVLLSSIYAAKGKWEEVAKLR 142
           PD+IGWATLLSSCR +GN EIGKWAAE L+EL+P N A Y+LLSSIYAAKGKW  VA+LR
Sbjct: 538 PDSIGWATLLSSCRLYGNEEIGKWAAESLLELDPQNPAGYILLSSIYAAKGKWSNVAQLR 597

Query: 141 KGMRDKGLRKEPGCSWIKYKNQVHIFSAHDQSSPFSDQIYSELEKLN 1
           +GMR+KG RKEPG SWIKYK++V+IFSA DQSSPFSDQIY+ELEKLN
Sbjct: 598 RGMREKGARKEPGFSWIKYKSKVYIFSADDQSSPFSDQIYAELEKLN 644


>ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
           gi|449493520|ref|XP_004159329.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  178 bits (452), Expect = 4e-43
 Identities = 84/106 (79%), Positives = 96/106 (90%)
 Frame = -1

Query: 321 PDAIGWATLLSSCRFFGNMEIGKWAAEFLMELEPHNTASYVLLSSIYAAKGKWEEVAKLR 142
           PDAIGWATLLSSCR  GN+EIGKWAAE L +LEP N ASY+LLSSIYAAKGKW++VAKLR
Sbjct: 538 PDAIGWATLLSSCRLNGNLEIGKWAAESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLR 597

Query: 141 KGMRDKGLRKEPGCSWIKYKNQVHIFSAHDQSSPFSDQIYSELEKL 4
           KGMR+ G++KEPG SWIKYKN+VHIFSA D+SSPFSDQIY++LE L
Sbjct: 598 KGMREMGVKKEPGHSWIKYKNKVHIFSADDRSSPFSDQIYAKLESL 643


>ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera] gi|297738214|emb|CBI27415.3|
           unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  172 bits (437), Expect = 2e-41
 Identities = 80/107 (74%), Positives = 94/107 (87%)
 Frame = -1

Query: 321 PDAIGWATLLSSCRFFGNMEIGKWAAEFLMELEPHNTASYVLLSSIYAAKGKWEEVAKLR 142
           PD +GWATLLSSCR  G+MEIGKWAA+ L+ LEP N ASYVLLSS+YA+KGKW++VA+LR
Sbjct: 538 PDVVGWATLLSSCRVHGDMEIGKWAADSLIALEPQNPASYVLLSSLYASKGKWDKVAQLR 597

Query: 141 KGMRDKGLRKEPGCSWIKYKNQVHIFSAHDQSSPFSDQIYSELEKLN 1
           +GMRDK +RKEPG SWIKYK +VH+FSA DQSSPF  QIY+ELEKLN
Sbjct: 598 RGMRDKRVRKEPGYSWIKYKGKVHVFSADDQSSPFLGQIYAELEKLN 644


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