BLASTX nr result

ID: Glycyrrhiza23_contig00013690 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013690
         (1156 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicag...   388   e-105
ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   377   e-102
ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   374   e-101
emb|CBI16497.3| unnamed protein product [Vitis vinifera]              299   8e-79
ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   299   8e-79

>ref|XP_003609294.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355510349|gb|AES91491.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 671

 Score =  388 bits (996), Expect = e-105
 Identities = 209/315 (66%), Positives = 230/315 (73%), Gaps = 24/315 (7%)
 Frame = -1

Query: 1156 LAVGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADA 977
            LAVGRVGSSTELIVQKIE V D +KR+ LVDLLRR   +  +G  ALTLVFVETK+GADA
Sbjct: 360  LAVGRVGSSTELIVQKIESVQDMEKRTRLVDLLRR---NVVNGKLALTLVFVETKKGADA 416

Query: 976  LENWLTRNGFPATAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNF 797
            LENWL R  FPA AIHGDKVQMERERALRSFKRG TPIMVATDVASRGLDIPHVAHV+NF
Sbjct: 417  LENWLCRINFPAIAIHGDKVQMERERALRSFKRGLTPIMVATDVASRGLDIPHVAHVINF 476

Query: 796  DLPRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGE 617
            DLPRDIDDYVHRIGRTGRAG+SGLATAFFS KN P+AK+L+GLLQEA QEVP+WL QY E
Sbjct: 477  DLPRDIDDYVHRIGRTGRAGQSGLATAFFSTKNMPMAKSLVGLLQEAKQEVPAWLVQYSE 536

Query: 616  GSTSGGRSH-GSQQH-WRGNYGGRDFRNASGPPELEXXXXXXXXXXXNADH--------- 470
             S  GGRS  GSQ+  WRGNYGGRDFRNA+ P  +E             D+         
Sbjct: 537  CSAPGGRSSVGSQRSPWRGNYGGRDFRNATEPGMVENYNSYNSNYSNYGDNGYHNVPEQV 596

Query: 469  -------------HAVDSHTDTSFDIKNSINDSSFDAPNTVFAGSYTCADADLYEGVKGK 329
                         HA +S+TD S D+ NS ND SFD  NTV AG +   DA L EG  G 
Sbjct: 597  QNYNYNGTYNNGDHAANSYTDASLDVTNSNNDCSFDNTNTVVAGGFNYTDAGLLEGSDGT 656

Query: 328  DGPCGFASVVATGWD 284
            +GPCG+ASVV TGWD
Sbjct: 657  NGPCGYASVVPTGWD 671


>ref|XP_003541505.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine max]
          Length = 586

 Score =  377 bits (967), Expect = e-102
 Identities = 206/299 (68%), Positives = 231/299 (77%), Gaps = 8/299 (2%)
 Frame = -1

Query: 1156 LAVGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADA 977
            L+VGRVGSSTELIVQKIE V D DKR HL+  LRRQ  HG +G HALTLVFVETKRGAD 
Sbjct: 292  LSVGRVGSSTELIVQKIEPVQDMDKRDHLIKHLRRQSVHGFNGKHALTLVFVETKRGADV 351

Query: 976  LENWLTRNGFPATAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNF 797
            LE WL R+GF A AIHGDKVQMERERALRSFK G TPI+VATDVASRGLDIPHVAHV+NF
Sbjct: 352  LEGWLLRSGFSAVAIHGDKVQMERERALRSFKSGVTPILVATDVASRGLDIPHVAHVINF 411

Query: 796  DLPRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGE 617
            DLPRDID+YVHRIGRTGRAGKSGLATAFFS+KN+P+AK+LIGLLQEANQEVPSWL+QY E
Sbjct: 412  DLPRDIDNYVHRIGRTGRAGKSGLATAFFSDKNSPIAKSLIGLLQEANQEVPSWLNQYAE 471

Query: 616  GSTSGGRS--HGSQQHWR-GNYGGRDFRNASGPPELEXXXXXXXXXXXNADHHAVDSH-- 452
            GS+SGG S  +G+Q++   G+YGGRDFRN     E E           NAD HAV+S+  
Sbjct: 472  GSSSGGGSQGYGAQRYSSGGSYGGRDFRNVI---EAEVENNNCYSTNVNAD-HAVESYYT 527

Query: 451  -TDTSFDIKNSINDSSFDAPNTVFAGSYTCADADLYEGV--KGKDGPCGFASVVATGWD 284
              D S+DI+NS  DSSFD  N   AGSY   D     G     +DGP G+AS+VATGWD
Sbjct: 528  ADDASYDIQNSNIDSSFDTLNIASAGSYNHTDFCELNGAGRVEEDGPLGYASIVATGWD 586


>ref|XP_003550826.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 52B-like [Glycine max]
          Length = 610

 Score =  374 bits (960), Expect = e-101
 Identities = 199/300 (66%), Positives = 231/300 (77%), Gaps = 9/300 (3%)
 Frame = -1

Query: 1156 LAVGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADA 977
            L+VGRVGSSTELIVQKIELV D DKR HL++ LRRQ  HGA+G HALTLVFVETKRGAD 
Sbjct: 311  LSVGRVGSSTELIVQKIELVQDMDKRDHLINHLRRQKVHGANGKHALTLVFVETKRGADV 370

Query: 976  LENWLTRNGFPATAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNF 797
            LE WL R+GF A AIHGDKVQMERERALRSFK G TPI+VATDVASRGLDIPHVAHV+NF
Sbjct: 371  LEGWLLRSGFSAVAIHGDKVQMERERALRSFKSGLTPILVATDVASRGLDIPHVAHVINF 430

Query: 796  DLPRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYG- 620
            DLPRDID+YVHRIGRTGRAGKSGLATAFFS+KN+P+AKALIGLLQEANQEVPSWL+QY  
Sbjct: 431  DLPRDIDNYVHRIGRTGRAGKSGLATAFFSDKNSPIAKALIGLLQEANQEVPSWLNQYAT 490

Query: 619  EGSTS--GGRSHGSQQHWRGNYGGRDFRNASGPP-ELEXXXXXXXXXXXNADHHAVD--S 455
            EGS+S  GGR + +Q++  G+YGG DFRN + P  +               + +  D  S
Sbjct: 491  EGSSSGGGGRGYEAQRYRSGSYGGHDFRNVTEPEVQNYNCYNTNGNAVQFVESYTADDAS 550

Query: 454  HTDTSFDIKNSINDSSFDAPNTVFAGSYTCADADLYEGVKGK---DGPCGFASVVATGWD 284
            + DTS+DI+NS  D SF+  +   +GSY   D+    G  G+   DGP G+AS+VATGWD
Sbjct: 551  YVDTSYDIQNSNIDCSFECLHIASSGSYNHTDSCELNGGGGRVEEDGPRGYASIVATGWD 610


>emb|CBI16497.3| unnamed protein product [Vitis vinifera]
          Length = 268

 Score =  299 bits (766), Expect = 8e-79
 Identities = 150/205 (73%), Positives = 171/205 (83%)
 Frame = -1

Query: 1156 LAVGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADA 977
            LAVGRVGSST+LIVQ++E VHDTDKRSHL+DLL  Q A+G HG   LTLVFVETK+GAD+
Sbjct: 25   LAVGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVHGKQYLTLVFVETKKGADS 84

Query: 976  LENWLTRNGFPATAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNF 797
            LE+WL  NGFPAT IHGD+ Q ERE+ALRSFK G TPI+VATDVA+RGLDIPHVAHVVNF
Sbjct: 85   LEHWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVATDVAARGLDIPHVAHVVNF 144

Query: 796  DLPRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGE 617
            DLP DIDDYVHRIGRTGRAGK+GLATAFF++ N+ LAKAL  L+QEANQEVP+WLS+Y  
Sbjct: 145  DLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSELMQEANQEVPAWLSRYAA 204

Query: 616  GSTSGGRSHGSQQHWRGNYGGRDFR 542
             S   GR+  S     G +GGRDFR
Sbjct: 205  RSPYVGRNRRS--GGGGRFGGRDFR 227


>ref|XP_002283489.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 37 [Vitis vinifera]
            gi|147854540|emb|CAN78578.1| hypothetical protein
            VITISV_013679 [Vitis vinifera]
          Length = 612

 Score =  299 bits (766), Expect = 8e-79
 Identities = 150/205 (73%), Positives = 171/205 (83%)
 Frame = -1

Query: 1156 LAVGRVGSSTELIVQKIELVHDTDKRSHLVDLLRRQGAHGAHGTHALTLVFVETKRGADA 977
            LAVGRVGSST+LIVQ++E VHDTDKRSHL+DLL  Q A+G HG   LTLVFVETK+GAD+
Sbjct: 369  LAVGRVGSSTDLIVQRVEFVHDTDKRSHLMDLLHAQRANGVHGKQYLTLVFVETKKGADS 428

Query: 976  LENWLTRNGFPATAIHGDKVQMERERALRSFKRGFTPIMVATDVASRGLDIPHVAHVVNF 797
            LE+WL  NGFPAT IHGD+ Q ERE+ALRSFK G TPI+VATDVA+RGLDIPHVAHVVNF
Sbjct: 429  LEHWLCMNGFPATTIHGDRTQQEREQALRSFKSGVTPILVATDVAARGLDIPHVAHVVNF 488

Query: 796  DLPRDIDDYVHRIGRTGRAGKSGLATAFFSNKNAPLAKALIGLLQEANQEVPSWLSQYGE 617
            DLP DIDDYVHRIGRTGRAGK+GLATAFF++ N+ LAKAL  L+QEANQEVP+WLS+Y  
Sbjct: 489  DLPNDIDDYVHRIGRTGRAGKTGLATAFFNDNNSSLAKALSELMQEANQEVPAWLSRYAA 548

Query: 616  GSTSGGRSHGSQQHWRGNYGGRDFR 542
             S   GR+  S     G +GGRDFR
Sbjct: 549  RSPYVGRNRRS--GGGGRFGGRDFR 571


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