BLASTX nr result

ID: Glycyrrhiza23_contig00013674 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013674
         (1154 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloro...   284   3e-74
ref|XP_003544871.1| PREDICTED: uncharacterized protein LOC100785...   175   2e-41
ref|NP_001239978.1| uncharacterized protein LOC100789822 [Glycin...   171   2e-40
ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloro...   160   7e-37
ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|2...   141   3e-31

>ref|XP_003552959.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Glycine
            max]
          Length = 544

 Score =  284 bits (727), Expect = 3e-74
 Identities = 163/255 (63%), Positives = 175/255 (68%), Gaps = 3/255 (1%)
 Frame = -3

Query: 1071 PGGSAQTKHYYXXXXXXXXXXXXXXXXSV--MGDVDELRVISNAKVSPATTELFYGAKVL 898
            PGGSAQTKHYY                    MG+VDELR ISNAKVSPATTELFYGAKVL
Sbjct: 289  PGGSAQTKHYYSNWHRRRRSFDRSNSRRKSSMGEVDELRAISNAKVSPATTELFYGAKVL 348

Query: 897  ITEKDLRDANLKPKNNNVHSDCTMGSASKD-ACDVGIGGDQKGLNKFQKLGRLWNKLGLV 721
            ITE DLRDANLKP N+ V SD  MGSASKD ACDV IG DQKGLN+F K GRLW+KLGL+
Sbjct: 349  ITENDLRDANLKPINS-VQSDNVMGSASKDDACDVAIGDDQKGLNRFHKWGRLWSKLGLM 407

Query: 720  QKRREYKLGEEECAAAATGDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNP 541
            QKRRE +L E E A    GDVV+KPIAESWQKLRRVVNGQ SESVSQKLIRSYSVSCR+ 
Sbjct: 408  QKRREDRLEEGEYAGGGGGDVVDKPIAESWQKLRRVVNGQVSESVSQKLIRSYSVSCRDS 467

Query: 540  CRTPGLVNGIGGPETKGSVLNGRQELMLPXXXXXXXXXXXVDTGLLRFYLTPXXXXXXXX 361
             RT GLV+G  G ETKG V NGRQ+ ML            VD GLLRFYLTP        
Sbjct: 468  SRTAGLVSGFVGSETKGHVFNGRQKFMLQRNRSVRYSPSNVDNGLLRFYLTPLKSYRRSR 527

Query: 360  XXXXXXRDLNSTARN 316
                  +  N TAR+
Sbjct: 528  SGKSSLKSSNPTARS 542


>ref|XP_003544871.1| PREDICTED: uncharacterized protein LOC100785680 [Glycine max]
          Length = 271

 Score =  175 bits (444), Expect = 2e-41
 Identities = 113/232 (48%), Positives = 141/232 (60%), Gaps = 7/232 (3%)
 Frame = -3

Query: 984 MGDVDELRVISNA----KVSPATTELFYGAKVLITEKDLRDANLKPKNNNV-HSDCTMGS 820
           + ++DEL+ +SN     KVSPAT   FYGAK+LITEK+L D+ ++  + +V  SDC + S
Sbjct: 50  IAELDELKSMSNVNANVKVSPAT---FYGAKLLITEKELMDSYVRSSSGDVVQSDCVVES 106

Query: 819 ASKDACDVGIGGDQKGLNKFQKLGRLWNKLGLVQ--KRREYKLGEEECAAAATGDVVNKP 646
            SKD  DV     QKG  K QK   +WNKLGLVQ  +R+E ++ EEE     +G  V+KP
Sbjct: 107 DSKDVADVATR--QKGSKKLQKWRGVWNKLGLVQGTERKEDRVREEE---GDSGVEVDKP 161

Query: 645 IAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNPCRTPGLVNGIGGPETKGSVLNGRQE 466
           +AES ++LRRVVN Q SE V QKL+RSYSVSCR+PC T G        E KGS LNGRQE
Sbjct: 162 LAESLERLRRVVNVQASEPVGQKLMRSYSVSCRSPCGTDGYAT--EESENKGSALNGRQE 219

Query: 465 LMLPXXXXXXXXXXXVDTGLLRFYLTPXXXXXXXXXXXXXXRDLNSTARNSL 310
           LM              DTGLLRFYLTP              +DL+S AR+ L
Sbjct: 220 LMFQRNRSVRYSPNNPDTGLLRFYLTPTKSYKRSKVGRSRVKDLHSAARSGL 271


>ref|NP_001239978.1| uncharacterized protein LOC100789822 [Glycine max]
           gi|255647416|gb|ACU24173.1| unknown [Glycine max]
          Length = 276

 Score =  171 bits (434), Expect = 2e-40
 Identities = 110/241 (45%), Positives = 140/241 (58%), Gaps = 16/241 (6%)
 Frame = -3

Query: 984 MGDVDELRVISNA--------------KVSPATTELFYGAKVLITEKDLRDANLKPKNNN 847
           + ++DEL+ +SNA              KVSPAT   FYGAK+LITEK+L D+ ++  ++ 
Sbjct: 45  IAELDELKSMSNANANANVNANAKVSPKVSPAT---FYGAKLLITEKELMDSYVRSSSDV 101

Query: 846 VHSDCTMGSASKDACDVGIGGDQKGLNKFQKLGRLWNKLGLVQK--RREYKLGEEECAAA 673
           V  DC + S SK   DV     QKG  K QK   +WNKLGLVQ+  R+E ++GEE+  + 
Sbjct: 102 VEPDCVVESDSKGVADVATR--QKGSKKLQKWRGIWNKLGLVQRTERKEDRMGEEKGDSG 159

Query: 672 ATGDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNPCRTPGLVNGIGGPETK 493
              +V  KP+AES ++LRRVVN Q SE V QKL+RSYSVSCR+PCRT G        E+K
Sbjct: 160 VEVEV-EKPLAESLERLRRVVNVQASEPVGQKLMRSYSVSCRSPCRTDGFTE---ESESK 215

Query: 492 GSVLNGRQELMLPXXXXXXXXXXXVDTGLLRFYLTPXXXXXXXXXXXXXXRDLNSTARNS 313
           GS LN RQE M              DTGLLRFYLTP              +DL+S AR+ 
Sbjct: 216 GSALNVRQEFMFQRNRSVRYSPNNPDTGLLRFYLTPTKSYKRSKAGRSSVKDLHSAARSG 275

Query: 312 L 310
           L
Sbjct: 276 L 276


>ref|XP_004143144.1| PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Cucumis
            sativus] gi|449496609|ref|XP_004160178.1| PREDICTED:
            UPF0503 protein At3g09070, chloroplastic-like [Cucumis
            sativus]
          Length = 575

 Score =  160 bits (404), Expect = 7e-37
 Identities = 105/236 (44%), Positives = 131/236 (55%), Gaps = 7/236 (2%)
 Frame = -3

Query: 1071 PGGSAQTKHYYXXXXXXXXXXXXXXXXS-----VMGDVDELRVISNAKVSPATTELFYGA 907
            PGGSAQTK YY                        GD DEL++ISNAKVSPATTELFYGA
Sbjct: 322  PGGSAQTKDYYMDSLSSMRRRKSFDRSCSHRKGASGDFDELKLISNAKVSPATTELFYGA 381

Query: 906  KVLITEKDLRDANLKPKNNNVHSDCTMGSASKDACDVGIGGDQKGLNKFQKLGRLWNKLG 727
            KVLITEKDL  +  +PK             SKD+       D+K   K  +  ++ + LG
Sbjct: 382  KVLITEKDLNSS--RPKTTGDGDLSGTDVTSKDSVPDAPVIDRKTFKKVHRWRKVLSVLG 439

Query: 726  LVQKRR-EYKLGEEECAAAATGDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSC 550
            +VQKR  E K  +EE +    G+VV++P+ ESW+KLRRV NG+ +  VSQKLIRSYSVSC
Sbjct: 440  MVQKRNGESKSDDEESSVG--GNVVDRPVVESWEKLRRVANGEANSCVSQKLIRSYSVSC 497

Query: 549  RNPCRTPGLVNGIGGPETKGSVLNGRQELMLPXXXXXXXXXXXVDT-GLLRFYLTP 385
            R+P +  G     GG ++K +V   R +  L             D  GLLRFYLTP
Sbjct: 498  RDPSKLAGF---NGGNDSKLNVTRWRDDFTLQRNRSVRYSPNNFDNGGLLRFYLTP 550


>ref|XP_002314125.1| predicted protein [Populus trichocarpa] gi|222850533|gb|EEE88080.1|
            predicted protein [Populus trichocarpa]
          Length = 552

 Score =  141 bits (356), Expect = 3e-31
 Identities = 93/257 (36%), Positives = 136/257 (52%), Gaps = 3/257 (1%)
 Frame = -3

Query: 1071 PGGSAQTKHYYXXXXXXXXXXXXXXXXSVMGDVDELRVISNAKVSPATTELFYGAKVLIT 892
            PGG+  T +YY                  +GD +E + +SNAKVSP T  LF+GAK+L+T
Sbjct: 304  PGGTMLTMNYYSDRRRKSFDRSGSNRRVGLGD-EEFKSMSNAKVSPETVGLFHGAKLLVT 362

Query: 891  EKDLRDANLKPKNNNVHSDCTMGSASKDACDVGIGGDQKGLNKFQKLGR---LWNKLGLV 721
            EK+LRD+N     +  H +    + SKD   +  GG +K   KF+K  +   +WN  GL+
Sbjct: 363  EKELRDSNWYSLKD--HREENADAVSKDVSSITGGGVRKKGFKFKKSHKWYGVWNIWGLM 420

Query: 720  QKRREYKLGEEECAAAATGDVVNKPIAESWQKLRRVVNGQGSESVSQKLIRSYSVSCRNP 541
            Q+  + K G+EE  +  +G+ V+ PI ESWQ L  V +G+ +  V+ KLIRSY+VS R+ 
Sbjct: 421  QRSSQSKCGDEE--SRVSGNAVDGPIPESWQNLSGVADGEANRIVNPKLIRSYTVSARDS 478

Query: 540  CRTPGLVNGIGGPETKGSVLNGRQELMLPXXXXXXXXXXXVDTGLLRFYLTPXXXXXXXX 361
            CR     N   G E+K + +   +EL+L            +D GLLRFYL+P        
Sbjct: 479  CRMACSTN---GAESKANDIKRGEELLLQRNRSTRYSPNNLDNGLLRFYLSPLRSYGRSK 535

Query: 360  XXXXXXRDLNSTARNSL 310
                  ++ NS +RN L
Sbjct: 536  SGKSRLKNTNSMSRNVL 552


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