BLASTX nr result

ID: Glycyrrhiza23_contig00013673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013673
         (275 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACU24445.1| unknown [Glycine max]                                   65   3e-15
ref|XP_004135363.1| PREDICTED: germin-like protein subfamily 3 m...    62   5e-15
ref|NP_001239847.1| germin-like protein subfamily 3 member 2-lik...    72   5e-11
ref|XP_002311014.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
ref|XP_002282767.2| PREDICTED: germin-like protein subfamily 3 m...    62   4e-08

>gb|ACU24445.1| unknown [Glycine max]
          Length = 174

 Score = 64.7 bits (156), Expect(2) = 3e-15
 Identities = 30/38 (78%), Positives = 32/38 (84%)
 Frame = +3

Query: 27  LVTLGAKFVRATFDVGGLNVPHFHPRTTEVAFVVEGKI 140
           L TLG  FVRA F VGG+NVPHFHPR TEVAFV+EGKI
Sbjct: 81  LNTLGVSFVRADFGVGGVNVPHFHPRATEVAFVLEGKI 118



 Score = 41.6 bits (96), Expect(2) = 3e-15
 Identities = 18/29 (62%), Positives = 24/29 (82%)
 Frame = +1

Query: 142 IKEKGQVKVFPTGLLDFQINVGEVPSTIL 228
           + EKG+V VFP GL+ FQ+NVG+ P+TIL
Sbjct: 133 VLEKGEVMVFPRGLVHFQMNVGDRPATIL 161


>ref|XP_004135363.1| PREDICTED: germin-like protein subfamily 3 member 2-like [Cucumis
           sativus] gi|449512801|ref|XP_004164143.1| PREDICTED:
           germin-like protein subfamily 3 member 2-like [Cucumis
           sativus]
          Length = 209

 Score = 61.6 bits (148), Expect(2) = 5e-15
 Identities = 28/38 (73%), Positives = 31/38 (81%)
 Frame = +3

Query: 27  LVTLGAKFVRATFDVGGLNVPHFHPRTTEVAFVVEGKI 140
           L TLG   VRA FDVGG+NVPHFHPR TEVA V+EGK+
Sbjct: 81  LNTLGMSLVRADFDVGGVNVPHFHPRATEVAVVLEGKV 118



 Score = 43.9 bits (102), Expect(2) = 5e-15
 Identities = 18/27 (66%), Positives = 24/27 (88%)
 Frame = +1

Query: 148 EKGQVKVFPTGLLDFQINVGEVPSTIL 228
           EKG+V VFP GL+ FQ+NVGE+P+TI+
Sbjct: 135 EKGEVMVFPRGLVHFQMNVGEIPATII 161


>ref|NP_001239847.1| germin-like protein subfamily 3 member 2-like precursor [Glycine
           max] gi|196122040|gb|ACG69494.1| germin-like protein 18
           [Glycine max]
          Length = 231

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 52/115 (45%), Positives = 59/115 (51%), Gaps = 32/115 (27%)
 Frame = +3

Query: 27  LVTLGAKFVRATFDVGGLNVPHFHPRTTEVAFVVEGKIN*G------------ERTGE-- 164
           L TLG  FVRA F VGG+NVPHFHPR TEVAFV+EGKI  G               GE  
Sbjct: 81  LNTLGVSFVRADFGVGGVNVPHFHPRATEVAFVLEGKIYSGFVDTNNKVFAKVLEKGEVM 140

Query: 165 -----------GVPNRPT*L-------SD*CWRGAFYYFGSEIKEELLEKAFGLT 275
                       V +RP  +       +    R     FGS+IKEELLEKAFGL+
Sbjct: 141 VFPRGLVHFQMNVGDRPATILGSFDSQNPGLMRIPNAVFGSDIKEELLEKAFGLS 195


>ref|XP_002311014.1| predicted protein [Populus trichocarpa] gi|222850834|gb|EEE88381.1|
           predicted protein [Populus trichocarpa]
          Length = 210

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 47/115 (40%), Positives = 56/115 (48%), Gaps = 32/115 (27%)
 Frame = +3

Query: 27  LVTLGAKFVRATFDVGGLNVPHFHPRTTEVAFVVEGKIN*G------------ERTGE-- 164
           L TLG   VRA F+ GG+NVPHFHPR TEVA+V+EGKI  G               GE  
Sbjct: 82  LNTLGVSLVRADFEAGGVNVPHFHPRATEVAYVLEGKIYSGFVDTQNRVFAKVLEKGEVM 141

Query: 165 -----------GVPNRPT*L-------SD*CWRGAFYYFGSEIKEELLEKAFGLT 275
                       V ++P  +       +    R     FG  IKEELLEKAFGL+
Sbjct: 142 VFPRGLVHFQMNVGDKPATILGSFNSENPGLMRIPTAVFGCGIKEELLEKAFGLS 196


>ref|XP_002282767.2| PREDICTED: germin-like protein subfamily 3 member 2-like [Vitis
           vinifera]
          Length = 223

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 45/126 (35%), Positives = 54/126 (42%), Gaps = 43/126 (34%)
 Frame = +3

Query: 27  LVTLGAKFVRATFDVGGLNVPHFHPRTTEVAFVVEGKI---------------------- 140
           L TLG  FVRA   VGG+N PHFHPR TE+ +V++GK+                      
Sbjct: 94  LNTLGMSFVRADIQVGGINAPHFHPRATEITYVLQGKVYSGFVDSTNRVFATVLEQGEVM 153

Query: 141 -----------N*GE----------RTGEGVPNRPT*LSD*CWRGAFYYFGSEIKEELLE 257
                      N GE              GV   P+ L           FGSEIK+ELLE
Sbjct: 154 VFPRGLVHFQMNVGESPATVFGCFNSQNPGVQKIPSAL-----------FGSEIKDELLE 202

Query: 258 KAFGLT 275
           KAFG+T
Sbjct: 203 KAFGMT 208


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