BLASTX nr result

ID: Glycyrrhiza23_contig00013666 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013666
         (228 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P11893.1|RK24_PEA RecName: Full=50S ribosomal protein L24, ch...    60   2e-07
ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycin...    59   3e-07
ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycin...    57   2e-06
ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatu...    56   3e-06
gb|ACJ86132.1| unknown [Medicago truncatula]                           55   8e-06

>sp|P11893.1|RK24_PEA RecName: Full=50S ribosomal protein L24, chloroplastic; AltName:
           Full=CL24; Flags: Precursor gi|20873|emb|CAA32185.1|
           unnamed protein product [Pisum sativum]
          Length = 194

 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 28/43 (65%), Positives = 29/43 (67%)
 Frame = +2

Query: 98  NSFLGQXXXXXXXXXXXXGKSTEKQCLIVMKLNRWERKECKPN 226
           NSFLGQ            GK TEK+CLIVMKL RWERKECKPN
Sbjct: 21  NSFLGQPLSPITLSPFLQGKPTEKKCLIVMKLKRWERKECKPN 63


>ref|NP_001238052.1| uncharacterized protein LOC100306643 [Glycine max]
           gi|255629161|gb|ACU14925.1| unknown [Glycine max]
          Length = 194

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/43 (65%), Positives = 29/43 (67%)
 Frame = +2

Query: 98  NSFLGQXXXXXXXXXXXXGKSTEKQCLIVMKLNRWERKECKPN 226
           NSFLGQ            GKSTEKQC IVM+L RWERKECKPN
Sbjct: 19  NSFLGQRLSPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPN 61


>ref|NP_001235551.1| uncharacterized protein LOC100500009 [Glycine max]
           gi|255628481|gb|ACU14585.1| unknown [Glycine max]
          Length = 193

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 27/42 (64%), Positives = 28/42 (66%)
 Frame = +2

Query: 101 SFLGQXXXXXXXXXXXXGKSTEKQCLIVMKLNRWERKECKPN 226
           SFLGQ            GKSTEKQC IVM+L RWERKECKPN
Sbjct: 20  SFLGQLLPPITLPSLLPGKSTEKQCPIVMRLKRWERKECKPN 61


>ref|XP_003596594.1| 50S ribosomal protein L24 [Medicago truncatula]
           gi|355485642|gb|AES66845.1| 50S ribosomal protein L24
           [Medicago truncatula] gi|388513937|gb|AFK45030.1|
           unknown [Medicago truncatula]
          Length = 194

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/43 (60%), Positives = 27/43 (62%)
 Frame = +2

Query: 98  NSFLGQXXXXXXXXXXXXGKSTEKQCLIVMKLNRWERKECKPN 226
           NSF GQ            GK T+KQC IVMKL RWERKECKPN
Sbjct: 21  NSFFGQPLSPITLSPLLPGKPTDKQCRIVMKLKRWERKECKPN 63


>gb|ACJ86132.1| unknown [Medicago truncatula]
          Length = 194

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/43 (58%), Positives = 27/43 (62%)
 Frame = +2

Query: 98  NSFLGQXXXXXXXXXXXXGKSTEKQCLIVMKLNRWERKECKPN 226
           NSF GQ            GK T+KQC IVMKL RWER+ECKPN
Sbjct: 21  NSFFGQPLSPITLSPLLPGKPTDKQCRIVMKLKRWEREECKPN 63


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