BLASTX nr result

ID: Glycyrrhiza23_contig00013607 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013607
         (1245 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   599   e-169
ref|XP_003529944.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   555   e-156
ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-...   547   e-153
ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-...   542   e-152
ref|XP_003528858.1| PREDICTED: F-box/kelch-repeat protein SKIP4-...   528   e-148

>ref|XP_003528857.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 362

 Score =  599 bits (1545), Expect = e-169
 Identities = 287/365 (78%), Positives = 323/365 (88%), Gaps = 1/365 (0%)
 Frame = +2

Query: 41   MEHVDDGKESSNNVDEAEVTSTPLICGLPDDISLLCLARVPRKYHSVLKCVSKRWRELVC 220
            MEH+DDGKESSN+V+E E T++ LICGLPDD+SL+CLARVPRKYHSVLKCVSKRWR+L+C
Sbjct: 1    MEHLDDGKESSNSVNEIEATNSLLICGLPDDLSLMCLARVPRKYHSVLKCVSKRWRDLIC 60

Query: 221  SEEWLYYRKKHKLDETWIYALCMDKLDQIFCYVLDPSPTSSRKCWKLIHGLPPHIMRRKG 400
            SEEW +YR+KHKLDETWIYALC DK ++IFCYVLDP  T+SR+ WKL+ GLPPHI  RKG
Sbjct: 61   SEEWYHYRRKHKLDETWIYALCRDKSNEIFCYVLDP--TTSRRYWKLLDGLPPHISNRKG 118

Query: 401  MGFEALGSKLFLLGGCGWSEDATDEVYSYNASLNSWVKAASLSTARCYFACEVMDEKLYA 580
            MGFEALG+KLFLLGGC    D+TDE YSY+AS N WV+AASLS ARCYFACEV+DEKLYA
Sbjct: 119  MGFEALGNKLFLLGGCSGFLDSTDEAYSYDASSNCWVEAASLSNARCYFACEVLDEKLYA 178

Query: 581  IGGIGSNSSDPHSWDTFDPCTNGWTSHRDPNIVPEIEDSVVMDGKIYIRCGK-SPVTPHV 757
            IGG+ SNSSD +SWDTFDP T  WT H DPNI  +IEDSVV+DGKIY RC + + V PH 
Sbjct: 179  IGGLVSNSSD-NSWDTFDPLTKCWTFHIDPNIASDIEDSVVLDGKIYTRCARHTDVAPHA 237

Query: 758  YAVVYEPSSGTWQHADADMVSGWRGPAVVVDGVLFVLDQSSGTRLMMWHEERREWIPVGK 937
            +AVVYEPSSGTWQ+ADADMVSGW GPAVVV G L+VLDQS GTRLMMWH+ERREWIPVGK
Sbjct: 238  FAVVYEPSSGTWQYADADMVSGWTGPAVVVYGTLYVLDQSLGTRLMMWHKERREWIPVGK 297

Query: 938  LSPLLTRPPCQLVAVGKSIFVVGKGLSTVVVDVGDLGNMGRVMVGSSIPKLLSDYNVISC 1117
            LSPLLTRPPCQLVAVGKSIF+VGK LSTVVVDVGDLGN G+VM+GSSIP LLSD+NVISC
Sbjct: 298  LSPLLTRPPCQLVAVGKSIFIVGKTLSTVVVDVGDLGNEGQVMMGSSIPGLLSDFNVISC 357

Query: 1118 KCLAI 1132
            KCL+I
Sbjct: 358  KCLSI 362


>ref|XP_003529944.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 361

 Score =  555 bits (1431), Expect = e-156
 Identities = 267/363 (73%), Positives = 307/363 (84%)
 Frame = +2

Query: 41   MEHVDDGKESSNNVDEAEVTSTPLICGLPDDISLLCLARVPRKYHSVLKCVSKRWRELVC 220
            MEH D GKESSN+++E EVT++P+ICGLPDDISL+CLAR+PRKYHSV+KCVSKRWR L+C
Sbjct: 1    MEHADKGKESSNSINEVEVTNSPIICGLPDDISLMCLARIPRKYHSVMKCVSKRWRNLIC 60

Query: 221  SEEWLYYRKKHKLDETWIYALCMDKLDQIFCYVLDPSPTSSRKCWKLIHGLPPHIMRRKG 400
            SEEW  YR+KHKLDETWIYALC DK ++IFCYVLDP  T SR+ WKLI  LPP I +RKG
Sbjct: 61   SEEWFCYRRKHKLDETWIYALCRDKSNEIFCYVLDP--TLSRRYWKLIDNLPPQISKRKG 118

Query: 401  MGFEALGSKLFLLGGCGWSEDATDEVYSYNASLNSWVKAASLSTARCYFACEVMDEKLYA 580
            +GFEALG+KLFLLGGC    D+TDEVYSY+AS N W +A SLSTAR  F CEV+D+KLYA
Sbjct: 119  IGFEALGNKLFLLGGCSEFLDSTDEVYSYDASSNCWAQATSLSTARYNFGCEVLDKKLYA 178

Query: 581  IGGIGSNSSDPHSWDTFDPCTNGWTSHRDPNIVPEIEDSVVMDGKIYIRCGKSPVTPHVY 760
            IGG GS SS  HSW+TFDP TN WTS  DP IV EI+DSVV+DGKIY+RC + PVTPHV+
Sbjct: 179  IGGGGSKSSY-HSWETFDPLTNCWTSQTDPKIVNEIKDSVVLDGKIYVRCSRYPVTPHVF 237

Query: 761  AVVYEPSSGTWQHADADMVSGWRGPAVVVDGVLFVLDQSSGTRLMMWHEERREWIPVGKL 940
            AVVYEPSSGTW++AD DMVSGW GPAV VDG L+VLDQS+GT+LMMWH+ERREWI VGKL
Sbjct: 238  AVVYEPSSGTWEYADDDMVSGWTGPAVAVDGTLYVLDQSAGTKLMMWHKERREWILVGKL 297

Query: 941  SPLLTRPPCQLVAVGKSIFVVGKGLSTVVVDVGDLGNMGRVMVGSSIPKLLSDYNVISCK 1120
            SPL  R PCQLVAVGKSIFVVG+ LSTVVVDV +LGN  +V+VGS+IP LL D NV S K
Sbjct: 298  SPLPIRQPCQLVAVGKSIFVVGRVLSTVVVDVDNLGNEDQVIVGSAIPGLLFDVNVTSVK 357

Query: 1121 CLA 1129
            CL+
Sbjct: 358  CLS 360


>ref|XP_002274480.2| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Vitis vinifera]
            gi|297745280|emb|CBI40360.3| unnamed protein product
            [Vitis vinifera]
          Length = 359

 Score =  547 bits (1409), Expect = e-153
 Identities = 252/351 (71%), Positives = 297/351 (84%)
 Frame = +2

Query: 80   VDEAEVTSTPLICGLPDDISLLCLARVPRKYHSVLKCVSKRWRELVCSEEWLYYRKKHKL 259
            +   E+  +PLICGLPDDI+L+CLARVPRKYH++LKCVS+RWR+LV SEEW  YR+KHKL
Sbjct: 11   ISRIELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVSSEEWHAYRQKHKL 70

Query: 260  DETWIYALCMDKLDQIFCYVLDPSPTSSRKCWKLIHGLPPHIMRRKGMGFEALGSKLFLL 439
            DE WIYALC DK +++ CYVLDP   S+R+ WKLI G PP  ++RKGM FE LG K++LL
Sbjct: 71   DEPWIYALCRDKFERVCCYVLDPY--STRRSWKLIEGFPPRSLKRKGMSFEVLGKKVYLL 128

Query: 440  GGCGWSEDATDEVYSYNASLNSWVKAASLSTARCYFACEVMDEKLYAIGGIGSNSSDPHS 619
            GGCGW EDATDEVYSY+AS N W +AA LSTARCYFACEV++ K+YAIGG+GS S+DPHS
Sbjct: 129  GGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYAIGGLGSKSNDPHS 188

Query: 620  WDTFDPCTNGWTSHRDPNIVPEIEDSVVMDGKIYIRCGKSPVTPHVYAVVYEPSSGTWQH 799
            WDT++P TN W SH DPNIVP+IEDS+V+D KIYIRCG S +T HVYAVVY PS GTWQH
Sbjct: 189  WDTYNPHTNSWKSHLDPNIVPDIEDSIVLDEKIYIRCGTSGLTSHVYAVVYNPSHGTWQH 248

Query: 800  ADADMVSGWRGPAVVVDGVLFVLDQSSGTRLMMWHEERREWIPVGKLSPLLTRPPCQLVA 979
            ADADMV GW+GPAVVVDG L+VLDQ  GTRLMMW +E R+W+ VG+LSPLLT PPC+LVA
Sbjct: 249  ADADMVLGWQGPAVVVDGTLYVLDQRLGTRLMMWQKESRKWVAVGRLSPLLTCPPCRLVA 308

Query: 980  VGKSIFVVGKGLSTVVVDVGDLGNMGRVMVGSSIPKLLSDYNVISCKCLAI 1132
            +GKSIFV+GKGLSTVV D+G++GNMG VMV SSIPKL SD +VISCK LAI
Sbjct: 309  IGKSIFVIGKGLSTVVFDIGNVGNMGGVMVSSSIPKLTSDDDVISCKILAI 359


>ref|XP_003633979.1| PREDICTED: LOW QUALITY PROTEIN: F-box/kelch-repeat protein SKIP4-like
            [Vitis vinifera]
          Length = 359

 Score =  542 bits (1396), Expect = e-152
 Identities = 253/364 (69%), Positives = 299/364 (82%)
 Frame = +2

Query: 41   MEHVDDGKESSNNVDEAEVTSTPLICGLPDDISLLCLARVPRKYHSVLKCVSKRWRELVC 220
            ME ++ G E  + +   E+  +PLICGLPDDI+L+CLARVPRKYH++LKCVS+RWR+LV 
Sbjct: 1    MELLESGLEGISRI---ELAQSPLICGLPDDIALICLARVPRKYHTLLKCVSRRWRDLVS 57

Query: 221  SEEWLYYRKKHKLDETWIYALCMDKLDQIFCYVLDPSPTSSRKCWKLIHGLPPHIMRRKG 400
            SEEW  YR+KHKLDE WIYALC DK  ++ CYVLDP   S+R+ WKLI G PP  ++RKG
Sbjct: 58   SEEWHAYRQKHKLDEPWIYALCRDKFKRVCCYVLDPY--STRRSWKLIEGFPPRSLKRKG 115

Query: 401  MGFEALGSKLFLLGGCGWSEDATDEVYSYNASLNSWVKAASLSTARCYFACEVMDEKLYA 580
            M FE LG K++LLGGCGW EDATDEVYSY+AS N W +AA LSTARCYFACEV++ K+YA
Sbjct: 116  MSFEVLGKKVYLLGGCGWLEDATDEVYSYDASTNRWSEAAPLSTARCYFACEVLNGKIYA 175

Query: 581  IGGIGSNSSDPHSWDTFDPCTNGWTSHRDPNIVPEIEDSVVMDGKIYIRCGKSPVTPHVY 760
            IGG+GS S+DPHSWDT++P TN W SH DPNIVP+IED++V+D KIYIRCG S +T HVY
Sbjct: 176  IGGLGSKSNDPHSWDTYNPHTNSWKSHSDPNIVPDIEDTIVLDEKIYIRCGTSALTSHVY 235

Query: 761  AVVYEPSSGTWQHADADMVSGWRGPAVVVDGVLFVLDQSSGTRLMMWHEERREWIPVGKL 940
             VVY PS GTWQHADADMV GW+GPAVVVDG  FVLDQ  GTRLMMW +E  +W+ VG+L
Sbjct: 236  VVVYNPSHGTWQHADADMVLGWQGPAVVVDGXFFVLDQRLGTRLMMWQKESTKWVAVGRL 295

Query: 941  SPLLTRPPCQLVAVGKSIFVVGKGLSTVVVDVGDLGNMGRVMVGSSIPKLLSDYNVISCK 1120
            SPLLT PPC+LVA+GKSIFV+GKGLSTVV D+G+ GNMG VMV SSIPKL SD +VISCK
Sbjct: 296  SPLLTCPPCRLVAIGKSIFVIGKGLSTVVFDIGNAGNMGGVMVSSSIPKLTSDDDVISCK 355

Query: 1121 CLAI 1132
             LAI
Sbjct: 356  ILAI 359


>ref|XP_003528858.1| PREDICTED: F-box/kelch-repeat protein SKIP4-like [Glycine max]
          Length = 362

 Score =  528 bits (1361), Expect = e-148
 Identities = 259/365 (70%), Positives = 300/365 (82%), Gaps = 1/365 (0%)
 Frame = +2

Query: 41   MEHVDDGKESSNNVDEAEVTSTPLICGLPDDISLLCLARVPRKYHSVLKCVSKRWRELVC 220
            MEHVD GKESSN+ +E E T++P+ICGLPDDISL+CLAR+PRKYHSVLKCVSKRWR+L+C
Sbjct: 1    MEHVDKGKESSNSDNEVEATNSPIICGLPDDISLMCLARIPRKYHSVLKCVSKRWRDLIC 60

Query: 221  SEEWLYYRKKHKLDETWIYALCMDKLDQIFCYVLDPSPTSSRKCWKLIHGLPPHIMRRKG 400
            SEEW+ YR+KHKLDETWIYALC DK  +IFCYVLD  PT   + WKL+ GLPPHI +R+G
Sbjct: 61   SEEWICYRRKHKLDETWIYALCKDKSKEIFCYVLD--PTDPIRYWKLVGGLPPHISKREG 118

Query: 401  MGFEALGSKLFLLGGCGWSEDATDEVYSYNASLNSWVKAASLSTARCYFACEVMDEKLYA 580
            MGFE LG+KLFLLGGC     +T+EVYSY+AS N W +A SLSTAR  FACEV+DEKLY 
Sbjct: 119  MGFEVLGNKLFLLGGCREFLGSTNEVYSYDASSNCWAQATSLSTARYNFACEVLDEKLYV 178

Query: 581  IGGIGSNSSDPHSWDTFDPCTNGWTSHRDPNIVPEIEDSVVMDGKIYIRCGKSPVTPHVY 760
            IGG GSNSSD HSW+TFDP TN WTS  DP IV EI+ SVV+DG IY+RC +    P V+
Sbjct: 179  IGGSGSNSSD-HSWETFDPLTNCWTSQTDPKIVSEIKHSVVLDGNIYVRCARFCANPRVF 237

Query: 761  AVVYEPSSGTWQHADADMVSGWRGPAVVVDGVLFVLDQSSG-TRLMMWHEERREWIPVGK 937
            +VVY+PSSGTWQ+AD DMVSGW GP VVVDG L+VLD S G TRLM+  +E REWIPVG+
Sbjct: 238  SVVYKPSSGTWQYADDDMVSGWTGPVVVVDGTLYVLDHSLGRTRLMISLKEGREWIPVGR 297

Query: 938  LSPLLTRPPCQLVAVGKSIFVVGKGLSTVVVDVGDLGNMGRVMVGSSIPKLLSDYNVISC 1117
            L PL TRPP QLVAVGKSIFVVG+ LSTVVVDVGDLGN  +V+VGS+IP LL D NV+S 
Sbjct: 298  LLPLHTRPPFQLVAVGKSIFVVGRVLSTVVVDVGDLGNEDQVIVGSAIPGLLFDVNVLSV 357

Query: 1118 KCLAI 1132
            KCL+I
Sbjct: 358  KCLSI 362


Top