BLASTX nr result

ID: Glycyrrhiza23_contig00013602 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013602
         (487 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003529362.1| PREDICTED: LOW QUALITY PROTEIN: nudix hydrol...    97   1e-18
ref|XP_003542707.1| PREDICTED: nudix hydrolase 15, mitochondrial...    96   3e-18
ref|XP_003542706.1| PREDICTED: nudix hydrolase 15, mitochondrial...    96   3e-18
gb|AFK40178.1| unknown [Medicago truncatula]                           94   9e-18
ref|XP_002305759.1| predicted protein [Populus trichocarpa] gi|2...    84   9e-15

>ref|XP_003529362.1| PREDICTED: LOW QUALITY PROTEIN: nudix hydrolase 15,
           mitochondrial-like [Glycine max]
          Length = 263

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 53/83 (63%), Positives = 58/83 (69%), Gaps = 11/83 (13%)
 Frame = +3

Query: 183 LAQQLHKYKPTPLPEYIVEQSIEENGGNNNAY-----------QNPEKFKPKKAVVLICI 329
           LAQ L +YK    PE IVEQSIEE+GG   +            QNPEKF+PKKA VLIC+
Sbjct: 19  LAQHLRQYKALSFPEDIVEQSIEESGGKVVSQVGFQESATPIDQNPEKFRPKKAAVLICL 78

Query: 330 FEGDDGDLRVILTKHSSKLFTHS 398
           FEGDDGDLRVILTK SSKL THS
Sbjct: 79  FEGDDGDLRVILTKRSSKLSTHS 101


>ref|XP_003542707.1| PREDICTED: nudix hydrolase 15, mitochondrial-like isoform 2
           [Glycine max]
          Length = 258

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/83 (63%), Positives = 57/83 (68%), Gaps = 11/83 (13%)
 Frame = +3

Query: 183 LAQQLHKYKPTPLPEYIVEQSIEENGGNNNAY-----------QNPEKFKPKKAVVLICI 329
           LAQ L +YK    PE IVEQSIEE GG   +            QNPEKF+PKKA VLIC+
Sbjct: 44  LAQHLRQYKAPSFPEDIVEQSIEEIGGKVVSQVGFQESAIPIGQNPEKFRPKKAAVLICL 103

Query: 330 FEGDDGDLRVILTKHSSKLFTHS 398
           FEGDDGDLRVILTK SSKL THS
Sbjct: 104 FEGDDGDLRVILTKRSSKLSTHS 126


>ref|XP_003542706.1| PREDICTED: nudix hydrolase 15, mitochondrial-like isoform 1
           [Glycine max]
          Length = 288

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 53/83 (63%), Positives = 57/83 (68%), Gaps = 11/83 (13%)
 Frame = +3

Query: 183 LAQQLHKYKPTPLPEYIVEQSIEENGGNNNAY-----------QNPEKFKPKKAVVLICI 329
           LAQ L +YK    PE IVEQSIEE GG   +            QNPEKF+PKKA VLIC+
Sbjct: 44  LAQHLRQYKAPSFPEDIVEQSIEEIGGKVVSQVGFQESAIPIGQNPEKFRPKKAAVLICL 103

Query: 330 FEGDDGDLRVILTKHSSKLFTHS 398
           FEGDDGDLRVILTK SSKL THS
Sbjct: 104 FEGDDGDLRVILTKRSSKLSTHS 126


>gb|AFK40178.1| unknown [Medicago truncatula]
          Length = 286

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 52/84 (61%), Positives = 55/84 (65%), Gaps = 12/84 (14%)
 Frame = +3

Query: 183 LAQQLHKYKPTP-LPEYIVEQSIEENGGNN-----------NAYQNPEKFKPKKAVVLIC 326
           LAQ L  YKP P  PE ++EQSIEE  G                QNPEKF PKKA VLIC
Sbjct: 40  LAQHLRLYKPPPPFPEDVLEQSIEEESGGKIVSQLGFPESATMIQNPEKFSPKKAAVLIC 99

Query: 327 IFEGDDGDLRVILTKHSSKLFTHS 398
           +FEGDDGDLRVILTK SSKL THS
Sbjct: 100 LFEGDDGDLRVILTKRSSKLSTHS 123


>ref|XP_002305759.1| predicted protein [Populus trichocarpa] gi|222848723|gb|EEE86270.1|
           predicted protein [Populus trichocarpa]
          Length = 245

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/73 (63%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
 Frame = +3

Query: 183 LAQQLHKYKPTPL-PEYIVEQSIEENGGNNNAYQNPEKFKPKKAVVLICIFEGDDGDLRV 359
           LAQQL  YKP  L P+ I EQ+IEE+ G     Q PE+F+P +A VL+CIFEGD GD RV
Sbjct: 12  LAQQLRFYKPPSLSPDEIEEQNIEESAGKV-VPQTPERFRPNRAAVLVCIFEGDAGDFRV 70

Query: 360 ILTKHSSKLFTHS 398
           ILTK SSKL THS
Sbjct: 71  ILTKRSSKLSTHS 83


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