BLASTX nr result

ID: Glycyrrhiza23_contig00013588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013588
         (1498 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycin...   485   e-134
ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding prote...   484   e-134
ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding prote...   472   e-130
ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding prote...   469   e-130
ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486...   464   e-128

>ref|NP_001241242.1| uncharacterized protein LOC100812728 [Glycine max]
            gi|255644888|gb|ACU22944.1| unknown [Glycine max]
          Length = 401

 Score =  485 bits (1248), Expect = e-134
 Identities = 256/336 (76%), Positives = 264/336 (78%), Gaps = 4/336 (1%)
 Frame = +3

Query: 441  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 620
            MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 621  AEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 800
            AEVALNSLS+R PSHSLAARILDETGVYKNLLQEIAQRVGAPLPQY TFRSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 801  GTVELAGITFTGEPXXXXXXXXXXXXXXXWSSLKQLAKETASSSTEPENNDELEQITIAR 980
            GTVELAGI FTGEP               WSSLKQLAKETA SSTEPENNDELEQITIAR
Sbjct: 121  GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 981  ALLNYRLKEKMAMSNPNGLIPFPKKFQIQNXXXXXXXXXXXXXXKILPLICQKTASRSRH 1160
            ALLNYRLKEK++MSN N  +PFPKKFQIQN              KILPLICQK A RSRH
Sbjct: 181  ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPAATSKILPLICQKAAPRSRH 240

Query: 1161 --PATAAAGSSDKSVMPPRSSAPEIRVTHHPKFPAAGAAPYVPIRQMRPPCQGIAPPVTI 1334
               A+ A  S D S MP  S+ PE R    PKFPAAGAAPYVPIRQMR PCQG+APPVTI
Sbjct: 241  LVGASPARASCDNSAMPQLSATPESRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTI 299

Query: 1335 RTAIPVFSPPP--ATVSHQAMXXXXXXXXXXXNIRQ 1436
            RTAIPVFSPPP  A VSHQ +            IRQ
Sbjct: 300  RTAIPVFSPPPAAAAVSHQVLRAPHVRVAPPVTIRQ 335


>ref|XP_003538171.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  484 bits (1246), Expect = e-134
 Identities = 256/338 (75%), Positives = 265/338 (78%), Gaps = 6/338 (1%)
 Frame = +3

Query: 441  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 620
            MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 621  AEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 800
            AEVALNSLS+R PSHSLAARILDETGVYKNLLQEIAQRVGAPLPQY TFRSGLGHLPVFT
Sbjct: 61   AEVALNSLSNRAPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYFTFRSGLGHLPVFT 120

Query: 801  GTVELAGITFTGEPXXXXXXXXXXXXXXXWSSLKQLAKETASSSTEPENNDELEQITIAR 980
            GTVELAGI FTGEP               WSSLKQLAKETA SSTEPENNDELEQITIAR
Sbjct: 121  GTVELAGIMFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETARSSTEPENNDELEQITIAR 180

Query: 981  ALLNYRLKEKMAMSNPNGLIPFPKKFQIQNXXXXXXXXXXXXXXKILPLICQKTASRSRH 1160
            ALLNYRLKEK++MSN N  +PFPKKFQIQN              KILPLICQK A RSRH
Sbjct: 181  ALLNYRLKEKISMSNSNAPVPFPKKFQIQNPRPTSPQPPPATTSKILPLICQKGAHRSRH 240

Query: 1161 --PATAAAGSSDKSVMPPRSSAPEIRVTHHPKFPAAGAAPYVPIRQMRPPCQGIAPPVTI 1334
               A+ A  SSD SVMP   + P+ R    PKFPAAGAAPYVPIRQMR PCQG+APPVTI
Sbjct: 241  LVAASPAPASSDNSVMPQLPATPDSRGIRRPKFPAAGAAPYVPIRQMR-PCQGMAPPVTI 299

Query: 1335 RTAIPVFSPPP----ATVSHQAMXXXXXXXXXXXNIRQ 1436
            RTAIPVFSPPP    A VSHQ +            IRQ
Sbjct: 300  RTAIPVFSPPPPPAAAAVSHQVLRAPHVRVAPPVTIRQ 337


>ref|XP_003541993.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 393

 Score =  472 bits (1215), Expect = e-130
 Identities = 245/347 (70%), Positives = 261/347 (75%), Gaps = 15/347 (4%)
 Frame = +3

Query: 441  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 620
            MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFE+PHYCSTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFETPHYCSTLRQAEHSA 60

Query: 621  AEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 800
            AE ALNSLSHRGPSHSLAA+ILDETGVYKNLLQEIAQRVGAPLP YTT+RSGLGHLPVFT
Sbjct: 61   AEAALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPHYTTYRSGLGHLPVFT 120

Query: 801  GTVELAGITFTGEPXXXXXXXXXXXXXXXWSSLKQLAKETASSSTEPENNDELEQITIAR 980
            G VELAGITFTGEP               WS+LKQLAKETASSSTEPENNDE+EQITIAR
Sbjct: 121  GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKETASSSTEPENNDEVEQITIAR 180

Query: 981  ALLNYRLKEKMAMSNPNGLIPFPKKFQIQNXXXXXXXXXXXXXXKILPLICQKTASR--- 1151
            ALLNYRLKEKM MSNPN  +PF ++FQIQN              KILPLICQKTA R   
Sbjct: 181  ALLNYRLKEKMTMSNPNAPLPFHERFQIQNPRPISSQPPPATSSKILPLICQKTAPRSKP 240

Query: 1152 ------------SRHPATAAAGSSDKSVMPPRSSAPEIRVTHHPKFPAAGAAPYVPIRQM 1295
                        SRHP  A A +SD S +P +S + E R T   KFPAAGAAPYVPIRQM
Sbjct: 241  SLATTTTNESPGSRHPQAAVAVTSDNSNLPQQSCSLECRATRPLKFPAAGAAPYVPIRQM 300

Query: 1296 RPPCQGIAPPVTIRTAIPVFSPPPATVSHQAMXXXXXXXXXXXNIRQ 1436
            RP CQ IAPPVTIRT +P F+ PPA+V H  +            IRQ
Sbjct: 301  RPSCQRIAPPVTIRTVVPAFAAPPASVPHPVIRAPPVRVAPPVTIRQ 347


>ref|XP_003540172.1| PREDICTED: double-stranded RNA-binding protein 2-like [Glycine max]
          Length = 411

 Score =  469 bits (1207), Expect = e-130
 Identities = 250/350 (71%), Positives = 263/350 (75%), Gaps = 18/350 (5%)
 Frame = +3

Query: 441  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 620
            MYKNQLQELAQRSCFNLPSY CIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYACIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 621  AEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 800
            AEVALNSLSHRGPSHSLAA+ILDETGVYKNLLQEIAQRVGAPLP YTT+RSGLGHLPVFT
Sbjct: 61   AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPHYTTYRSGLGHLPVFT 120

Query: 801  GTVELAGITFTGEPXXXXXXXXXXXXXXXWSSLKQLAKETASSSTEPENNDELEQITIAR 980
            G VELAGITFTGEP               WS+LKQLAKETASSSTEPENNDELEQITIAR
Sbjct: 121  GIVELAGITFTGEPAKNKKQAEKNAAMAAWSALKQLAKETASSSTEPENNDELEQITIAR 180

Query: 981  ALLNYRLKEKMAMSNPNGLIPFPKKFQIQNXXXXXXXXXXXXXXKILPLICQKTA----- 1145
            ALLNYRLKEKMAMSNPN  + F K+FQIQN              KILPLICQKTA     
Sbjct: 181  ALLNYRLKEKMAMSNPNAPVSFHKRFQIQNPRPISSQPPPATSSKILPLICQKTAPRSKP 240

Query: 1146 ---------SRSRHPATAAAGSSDKSVMPPRSSAPEIRVTHHPKFPAAGAAPYVPIRQMR 1298
                      RSRHP   AA +SD S +PP+S + E R T   KF AAGAAPYVPIRQMR
Sbjct: 241  SLATTANESPRSRHP--QAAMTSDNSTLPPQSCSLESRATRPLKFRAAGAAPYVPIRQMR 298

Query: 1299 PPCQGIAPPVTIRTAIPVFS----PPPATVSHQAMXXXXXXXXXXXNIRQ 1436
            P CQ IAPPVTIRT +P F+    PPPA+V H A+            IRQ
Sbjct: 299  PSCQRIAPPVTIRTVVPAFATPPCPPPASVPHPAIRAPPVRVAPPVTIRQ 348


>ref|XP_003597250.1| Ribonuclease [Medicago truncatula] gi|355486298|gb|AES67501.1|
            Ribonuclease [Medicago truncatula]
          Length = 408

 Score =  464 bits (1195), Expect = e-128
 Identities = 254/349 (72%), Positives = 266/349 (76%), Gaps = 17/349 (4%)
 Frame = +3

Query: 441  MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 620
            MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA
Sbjct: 1    MYKNQLQELAQRSCFNLPSYTCIREGPDHAPRFKATVNFNGEIFESPHYCSTLRQAEHSA 60

Query: 621  AEVALNSLSHRGPSHSLAARILDETGVYKNLLQEIAQRVGAPLPQYTTFRSGLGHLPVFT 800
            AEVALNSLSHRGPSHSLAA+ILDETGVYKNLLQEIAQRVGAPLPQYTT+RSGLGHLPVFT
Sbjct: 61   AEVALNSLSHRGPSHSLAAKILDETGVYKNLLQEIAQRVGAPLPQYTTYRSGLGHLPVFT 120

Query: 801  GTVELAGITFTGEPXXXXXXXXXXXXXXXWSSLKQLAKETASSSTEPENNDELEQITIAR 980
            G VELAGITFTGEP               WSSLKQLAKETASSSTEPENNDELEQITIAR
Sbjct: 121  GIVELAGITFTGEPAKNKKQAEKNAAMAAWSSLKQLAKETASSSTEPENNDELEQITIAR 180

Query: 981  ALLNYRLKEKMAMSNPNGLIPFPKKFQIQNXXXXXXXXXXXXXXKILPLICQKTA----- 1145
            ALLNYRLKEKM+MSNPN  IPF KKFQIQN              KILPLICQKT      
Sbjct: 181  ALLNYRLKEKMSMSNPNARIPFQKKFQIQN-IRPTSSQSPATTSKILPLICQKTGPRNRP 239

Query: 1146 --------SRSRHPATAAAGSSDKSVM-PPRSSAPEIRVTHHPKFPAAGAAPYVPIRQMR 1298
                     RSRHP   AA +SDKS++  P+SSA E RVT   +FPAAGA PYVPIRQMR
Sbjct: 240  SSATPNENPRSRHP--QAAATSDKSILQQPQSSAIESRVTRPLRFPAAGAPPYVPIRQMR 297

Query: 1299 PPCQGIAPPVTIRTAIPVFSP---PPATVSHQAMXXXXXXXXXXXNIRQ 1436
             PC GIAP V++RT IPVFS    PP T  HQ +           +IRQ
Sbjct: 298  -PCHGIAPAVSVRTVIPVFSAPPLPPPTSVHQIIRAPPVRIAPPVSIRQ 345


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