BLASTX nr result

ID: Glycyrrhiza23_contig00013578 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013578
         (1310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like...   298   2e-78
ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   295   2e-77
ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   295   2e-77
ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   295   2e-77
ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago trunc...   295   2e-77

>ref|XP_003555612.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Glycine max]
          Length = 264

 Score =  298 bits (764), Expect = 2e-78
 Identities = 148/186 (79%), Positives = 153/186 (82%)
 Frame = +3

Query: 156 MSGRSSRTIYVGNLPGDIRLREVEDLFYKYGPIIDIDLKIPTRPPGYAFVEFEDARDAED 335
           MSGRSSRTIYVGNLPGD+RLREVEDLFYKYGPI+DIDLKIP RPPGYAFVEFEDARDAED
Sbjct: 1   MSGRSSRTIYVGNLPGDVRLREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60

Query: 336 AIYYRDGYNFDGYRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGLPP 515
           AI YRDGYNFDG+RLRVELAH                               VLVTGLPP
Sbjct: 61  AIQYRDGYNFDGFRLRVELAHGGRGYSSSVDRYSSYSGGSGSRGVSRRSDYRVLVTGLPP 120

Query: 516 SASWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA 695
           SASWQDLKDHMRKAGDVCFSQVFR+RGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA
Sbjct: 121 SASWQDLKDHMRKAGDVCFSQVFRERGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFSRA 180

Query: 696 YIRVRE 713
           +IRVRE
Sbjct: 181 FIRVRE 186


>ref|XP_003591155.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355480203|gb|AES61406.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 316

 Score =  295 bits (754), Expect = 2e-77
 Identities = 145/188 (77%), Positives = 154/188 (81%)
 Frame = +3

Query: 150 KKMSGRSSRTIYVGNLPGDIRLREVEDLFYKYGPIIDIDLKIPTRPPGYAFVEFEDARDA 329
           KKMSGRSSRT+YVGNLPGDIRLREVEDLFYKYGPI+DIDLKIP +PPGYAFVEFEDARDA
Sbjct: 30  KKMSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDA 89

Query: 330 EDAIYYRDGYNFDGYRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGL 509
           +DAIYYRDGY+FDGYRL VELAH                               VLVTGL
Sbjct: 90  QDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGL 149

Query: 510 PPSASWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFS 689
           PPSASWQDLKDHMRKAG VCFSQVFR+RGG+TGIVDYTNYDD+KYAIRKLDDSEFRNAFS
Sbjct: 150 PPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFS 209

Query: 690 RAYIRVRE 713
           R+YIRVRE
Sbjct: 210 RSYIRVRE 217


>ref|XP_003591154.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355480202|gb|AES61405.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 322

 Score =  295 bits (754), Expect = 2e-77
 Identities = 145/188 (77%), Positives = 154/188 (81%)
 Frame = +3

Query: 150 KKMSGRSSRTIYVGNLPGDIRLREVEDLFYKYGPIIDIDLKIPTRPPGYAFVEFEDARDA 329
           KKMSGRSSRT+YVGNLPGDIRLREVEDLFYKYGPI+DIDLKIP +PPGYAFVEFEDARDA
Sbjct: 30  KKMSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDA 89

Query: 330 EDAIYYRDGYNFDGYRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGL 509
           +DAIYYRDGY+FDGYRL VELAH                               VLVTGL
Sbjct: 90  QDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGL 149

Query: 510 PPSASWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFS 689
           PPSASWQDLKDHMRKAG VCFSQVFR+RGG+TGIVDYTNYDD+KYAIRKLDDSEFRNAFS
Sbjct: 150 PPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFS 209

Query: 690 RAYIRVRE 713
           R+YIRVRE
Sbjct: 210 RSYIRVRE 217


>ref|XP_003591153.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355480201|gb|AES61404.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 290

 Score =  295 bits (754), Expect = 2e-77
 Identities = 145/188 (77%), Positives = 154/188 (81%)
 Frame = +3

Query: 150 KKMSGRSSRTIYVGNLPGDIRLREVEDLFYKYGPIIDIDLKIPTRPPGYAFVEFEDARDA 329
           KKMSGRSSRT+YVGNLPGDIRLREVEDLFYKYGPI+DIDLKIP +PPGYAFVEFEDARDA
Sbjct: 30  KKMSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDA 89

Query: 330 EDAIYYRDGYNFDGYRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGL 509
           +DAIYYRDGY+FDGYRL VELAH                               VLVTGL
Sbjct: 90  QDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGL 149

Query: 510 PPSASWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFS 689
           PPSASWQDLKDHMRKAG VCFSQVFR+RGG+TGIVDYTNYDD+KYAIRKLDDSEFRNAFS
Sbjct: 150 PPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFS 209

Query: 690 RAYIRVRE 713
           R+YIRVRE
Sbjct: 210 RSYIRVRE 217


>ref|XP_003591152.1| Pre-mRNA-splicing factor SF2 [Medicago truncatula]
           gi|355480200|gb|AES61403.1| Pre-mRNA-splicing factor SF2
           [Medicago truncatula]
          Length = 334

 Score =  295 bits (754), Expect = 2e-77
 Identities = 145/188 (77%), Positives = 154/188 (81%)
 Frame = +3

Query: 150 KKMSGRSSRTIYVGNLPGDIRLREVEDLFYKYGPIIDIDLKIPTRPPGYAFVEFEDARDA 329
           KKMSGRSSRT+YVGNLPGDIRLREVEDLFYKYGPI+DIDLKIP +PPGYAFVEFEDARDA
Sbjct: 30  KKMSGRSSRTLYVGNLPGDIRLREVEDLFYKYGPIVDIDLKIPPKPPGYAFVEFEDARDA 89

Query: 330 EDAIYYRDGYNFDGYRLRVELAHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLVTGL 509
           +DAIYYRDGY+FDGYRL VELAH                               VLVTGL
Sbjct: 90  QDAIYYRDGYDFDGYRLLVELAHGGRGSSSSVDRYSRHSGRSGSRGVSRRSDYRVLVTGL 149

Query: 510 PPSASWQDLKDHMRKAGDVCFSQVFRDRGGMTGIVDYTNYDDMKYAIRKLDDSEFRNAFS 689
           PPSASWQDLKDHMRKAG VCFSQVFR+RGG+TGIVDYTNYDD+KYAIRKLDDSEFRNAFS
Sbjct: 150 PPSASWQDLKDHMRKAGHVCFSQVFRERGGLTGIVDYTNYDDVKYAIRKLDDSEFRNAFS 209

Query: 690 RAYIRVRE 713
           R+YIRVRE
Sbjct: 210 RSYIRVRE 217


Top