BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013572
         (572 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycin...   270   9e-71
ref|XP_003554543.1| PREDICTED: DNA-directed RNA polymerase III s...   264   9e-69
ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III s...   254   7e-66
ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III s...   253   2e-65
ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8...   226   3e-57

>ref|NP_001241897.1| uncharacterized protein LOC100800770 [Glycine max]
           gi|255644932|gb|ACU22966.1| unknown [Glycine max]
          Length = 214

 Score =  270 bits (691), Expect = 9e-71
 Identities = 130/176 (73%), Positives = 147/176 (83%), Gaps = 14/176 (7%)
 Frame = -3

Query: 570 LFLDKVIANLGLCISVYDIRSIEGGFIYPGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSS 391
           LFLDKVIANLGLCISVYDIRSI+GGFI+PGDGAPTYTVVFNL+MFRPF  EI+TA+LLSS
Sbjct: 33  LFLDKVIANLGLCISVYDIRSIDGGFIFPGDGAPTYTVVFNLIMFRPFEKEIITARLLSS 92

Query: 390 DADGLRLTLGFFEDIYIPAHHLPNPNHFV--------------AQSINSKNGIWFWDYDE 253
           DADGLRLT+GFF+DIYIPA  LP+PNHFV                + +SK G+W+WDY+E
Sbjct: 93  DADGLRLTIGFFDDIYIPASRLPDPNHFVETEQKKRVFSGQESTTNSSSKKGVWYWDYNE 152

Query: 252 QTSYPIDDTDVIKFRVQSVSYPPIPVEQPKESKPFAPMLITGSLDHDGLGPVSWWF 85
           Q  YPI DTDV KFRV +VSYP IPVEQPKESKPFAPMLI+G++D DGLGPVSWWF
Sbjct: 153 Q-EYPIQDTDVTKFRVTNVSYPQIPVEQPKESKPFAPMLISGAMDDDGLGPVSWWF 207


>ref|XP_003554543.1| PREDICTED: DNA-directed RNA polymerase III subunit rpc8-like
           [Glycine max]
          Length = 212

 Score =  264 bits (674), Expect = 9e-69
 Identities = 128/176 (72%), Positives = 147/176 (83%), Gaps = 14/176 (7%)
 Frame = -3

Query: 570 LFLDKVIANLGLCISVYDIRSIEGGFIYPGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSS 391
           LFLDKVIANLGLCISVYDIRSI+GGFI+PGDGAPTYTVVFNL+MFRPF  EI+TA+LLSS
Sbjct: 33  LFLDKVIANLGLCISVYDIRSIDGGFIFPGDGAPTYTVVFNLIMFRPFEKEIITARLLSS 92

Query: 390 DADGLRLTLGFFEDIYIPAHHLPNPNHFV--------------AQSINSKNGIWFWDYDE 253
           DADGLRLT+GF++DIYIPA  LP+PNHFV                + +SK G+W+WDYDE
Sbjct: 93  DADGLRLTIGFYDDIYIPASRLPDPNHFVETEPKKRVSSGQESTANPSSKKGMWYWDYDE 152

Query: 252 QTSYPIDDTDVIKFRVQSVSYPPIPVEQPKESKPFAPMLITGSLDHDGLGPVSWWF 85
           Q  YPI  TDVIKFRV +VSYP IPVEQPKESKPFAPML++G++D DGLGP+SWWF
Sbjct: 153 Q-EYPI--TDVIKFRVTNVSYPQIPVEQPKESKPFAPMLVSGAIDDDGLGPISWWF 205


>ref|XP_002271507.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC8-like [Vitis
           vinifera] gi|296086693|emb|CBI32328.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  254 bits (649), Expect = 7e-66
 Identities = 120/161 (74%), Positives = 135/161 (83%)
 Frame = -3

Query: 570 LFLDKVIANLGLCISVYDIRSIEGGFIYPGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSS 391
           LFLDKV+ANLGLCISVYDIRSI+GGF++PGDGA TYTV F LVMFRPFVGEI+TAKL  S
Sbjct: 33  LFLDKVLANLGLCISVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKES 92

Query: 390 DADGLRLTLGFFEDIYIPAHHLPNPNHFVAQSINSKNGIWFWDYDEQTSYPIDDTDVIKF 211
           DA+GL+L+LGFF+DIYIP H +PNP H      N    IW WDY EQ  +PID  D I+F
Sbjct: 93  DANGLQLSLGFFDDIYIPVHLMPNPCHCEPDPENKSQVIWIWDYQEQ-KFPIDGLDEIRF 151

Query: 210 RVQSVSYPPIPVEQPKESKPFAPMLITGSLDHDGLGPVSWW 88
           +VQSVSYPPIPVEQPKESKPFAPM+I GSLD+DGLGPVSWW
Sbjct: 152 QVQSVSYPPIPVEQPKESKPFAPMMIMGSLDYDGLGPVSWW 192


>ref|XP_002281971.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC8 [Vitis
           vinifera] gi|297735498|emb|CBI17938.3| unnamed protein
           product [Vitis vinifera]
          Length = 192

 Score =  253 bits (646), Expect = 2e-65
 Identities = 121/161 (75%), Positives = 134/161 (83%)
 Frame = -3

Query: 570 LFLDKVIANLGLCISVYDIRSIEGGFIYPGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSS 391
           LFLDKVIANLGLCISVYDIRSI+GGF++PGDGA TYTV F LVMFRPFVGEI+TAKL  S
Sbjct: 33  LFLDKVIANLGLCISVYDIRSIDGGFVFPGDGASTYTVEFRLVMFRPFVGEIITAKLKES 92

Query: 390 DADGLRLTLGFFEDIYIPAHHLPNPNHFVAQSINSKNGIWFWDYDEQTSYPIDDTDVIKF 211
           DA+GLRL+LGFF+DIYIP H +PNP H           IW WDY EQ  +PID  D I+F
Sbjct: 93  DANGLRLSLGFFDDIYIPVHLMPNPCHCEPNPEKKGQVIWIWDYQEQ-KFPIDGIDEIRF 151

Query: 210 RVQSVSYPPIPVEQPKESKPFAPMLITGSLDHDGLGPVSWW 88
           +VQSVSYPPIPVEQPKESKPFAPM+I GSLD+DGLGPVSWW
Sbjct: 152 QVQSVSYPPIPVEQPKESKPFAPMVIMGSLDYDGLGPVSWW 192


>ref|XP_003629059.1| DNA-directed RNA polymerase III subunit RPC8 [Medicago truncatula]
           gi|355523081|gb|AET03535.1| DNA-directed RNA polymerase
           III subunit RPC8 [Medicago truncatula]
          Length = 220

 Score =  226 bits (575), Expect = 3e-57
 Identities = 108/163 (66%), Positives = 134/163 (82%), Gaps = 2/163 (1%)
 Frame = -3

Query: 570 LFLDKVIANLGLCISVYDIRSIEGGFIYPGDGAPTYTVVFNLVMFRPFVGEIVTAKLLSS 391
           LFLDKVI  LGLCISVYDI SIEGG I+PG GAPTY VVFNL+MFRPF GEI++AK++S 
Sbjct: 60  LFLDKVIQKLGLCISVYDITSIEGGSIFPGAGAPTYQVVFNLIMFRPFPGEIISAKVMSL 119

Query: 390 DADGLRLTLGFFEDIYIPAHHLPNPNHFVAQSINSKNGIWFWDYDEQT-SYPID-DTDVI 217
           DADG+RL+LGFFEDIYIP HH+P P+++++++   K   W W+Y E+T  + I+   +VI
Sbjct: 120 DADGVRLSLGFFEDIYIPTHHMPYPSYYISKNNTRK---WTWEYGEETDEFNIEISNEVI 176

Query: 216 KFRVQSVSYPPIPVEQPKESKPFAPMLITGSLDHDGLGPVSWW 88
           +F+V SVSYP IPVEQ KESKPFAPM++ GSL H+GLGPVSWW
Sbjct: 177 RFQVLSVSYPTIPVEQAKESKPFAPMVVNGSLYHEGLGPVSWW 219