BLASTX nr result
ID: Glycyrrhiza23_contig00013562
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00013562 (767 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001235686.1| uncharacterized protein LOC100305971 [Glycin... 213 3e-53 ref|XP_003524818.1| PREDICTED: multiple RNA-binding domain-conta... 213 4e-53 ref|XP_003615725.1| Eukaryotic translation initiation factor 3 s... 181 1e-43 ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-conta... 148 1e-33 ref|XP_002533421.1| RNA binding protein, putative [Ricinus commu... 139 9e-31 >ref|NP_001235686.1| uncharacterized protein LOC100305971 [Glycine max] gi|255627149|gb|ACU13919.1| unknown [Glycine max] Length = 150 Score = 213 bits (543), Expect = 3e-53 Identities = 100/118 (84%), Positives = 107/118 (90%) Frame = +2 Query: 182 MRQDYPLASKIIVKNLPYSTGETTLQKEFSNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQ 361 +R DYPLASKI+VKNLPYSTGETTLQKEFSNFGKIAEVK+VKD+ TKR KG AFIQYTCQ Sbjct: 33 LRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMNTKRSKGIAFIQYTCQ 92 Query: 362 DDAMLALEIMDQKDFHGRTISVEIARLGWDDLGAPPRTSGPPKKWNLPEQVDEVDCWY 535 DDAMLALE MDQKDF+GRTI VEIARLGWDD GA PR SGPPKKW+LPEQ + VDCWY Sbjct: 93 DDAMLALETMDQKDFYGRTIGVEIARLGWDDFGASPRASGPPKKWDLPEQGEVVDCWY 150 >ref|XP_003524818.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like [Glycine max] Length = 149 Score = 213 bits (542), Expect = 4e-53 Identities = 109/149 (73%), Positives = 116/149 (77%), Gaps = 2/149 (1%) Frame = +2 Query: 95 MMMGMLAS-FPGYSTTXXXXXXXXXXXXXX-MRQDYPLASKIIVKNLPYSTGETTLQKEF 268 M M MLAS F GY+ +R DYPLASKI+VKNLPYSTGETTLQKEF Sbjct: 1 MEMNMLASSFTGYAKPFASVNPSLLPFRASSLRHDYPLASKIVVKNLPYSTGETTLQKEF 60 Query: 269 SNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQDDAMLALEIMDQKDFHGRTISVEIARLGW 448 SNFGKIAE KLVKD+ TKR KG AFIQYTCQDDAMLALE MDQKDF+GRTI VEIARLGW Sbjct: 61 SNFGKIAEGKLVKDMNTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIGVEIARLGW 120 Query: 449 DDLGAPPRTSGPPKKWNLPEQVDEVDCWY 535 DD GA PR SGPPKKW+LPEQ + VDCWY Sbjct: 121 DDFGASPRASGPPKKWHLPEQGEVVDCWY 149 >ref|XP_003615725.1| Eukaryotic translation initiation factor 3 subunit G [Medicago truncatula] gi|355517060|gb|AES98683.1| Eukaryotic translation initiation factor 3 subunit G [Medicago truncatula] Length = 149 Score = 181 bits (460), Expect = 1e-43 Identities = 93/143 (65%), Positives = 106/143 (74%), Gaps = 1/143 (0%) Frame = +2 Query: 110 LASFPGYSTTXXXXXXXXXXXXXXMRQDYPLASKIIVKNLPYSTGETTLQKEFSNFGKIA 289 LASFP Y T MR +YPLASKI+VKNLPY TGE LQK+FSNFGKIA Sbjct: 8 LASFP-YYTPPNRSRLNLLRSSLSMRHEYPLASKILVKNLPYFTGENALQKKFSNFGKIA 66 Query: 290 EVKLVKDVYTKRPKGFAFIQYTCQDDAMLALEIMDQKDFHGRTISVEIARLGWDDLGAPP 469 EV++VKDV T+R KG AFIQYTCQDDAMLALE MDQ+ F+GRTISVE+ +L + P Sbjct: 67 EVQMVKDVSTERSKGLAFIQYTCQDDAMLALETMDQQSFYGRTISVELEKLDVHNFVGSP 126 Query: 470 RTSGPPKKWNLPE-QVDEVDCWY 535 + SGPPKKWNLP QV+EVDCWY Sbjct: 127 KASGPPKKWNLPAVQVEEVDCWY 149 >ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like isoform 1 [Cucumis sativus] gi|449490646|ref|XP_004158665.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like isoform 1 [Cucumis sativus] Length = 158 Score = 148 bits (374), Expect = 1e-33 Identities = 78/120 (65%), Positives = 89/120 (74%), Gaps = 5/120 (4%) Frame = +2 Query: 191 DYPLASKIIVKNLPYSTGETTLQKEFSNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQDDA 370 DYPLAS+++V+NLPYST E+ LQ+EFSNFG+IAEV L KD TKRPKG+AFIQYTCQDDA Sbjct: 40 DYPLASRLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDA 99 Query: 371 MLALEIMDQKDFHGRTISVEIARLGWDDLGAPPRTSGPPK-----KWNLPEQVDEVDCWY 535 MLALE MD K F GR I VEIA G G PR SGPPK + N+ +Q D DCWY Sbjct: 100 MLALETMDCKIFDGRMIYVEIATPGSGSFGGYPRASGPPKERPNERANV-DQEDVADCWY 158 >ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis] gi|223526734|gb|EEF28964.1| RNA binding protein, putative [Ricinus communis] Length = 152 Score = 139 bits (349), Expect = 9e-31 Identities = 71/115 (61%), Positives = 87/115 (75%) Frame = +2 Query: 191 DYPLASKIIVKNLPYSTGETTLQKEFSNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQDDA 370 ++PLAS+IIVKNL YS GE++LQKEFSNFG+IAEVKLVKD KR K F FIQYTCQDDA Sbjct: 39 NFPLASRIIVKNLGYSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFIQYTCQDDA 98 Query: 371 MLALEIMDQKDFHGRTISVEIARLGWDDLGAPPRTSGPPKKWNLPEQVDEVDCWY 535 +LA+E MD+K F GR I V++A+ G + P+ SGPP +L EQ + DCWY Sbjct: 99 ILAMENMDRKIFDGRLIYVDLAKPGKETFRGYPKASGPP-PLHLREQDEVADCWY 152