BLASTX nr result

ID: Glycyrrhiza23_contig00013562 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013562
         (767 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001235686.1| uncharacterized protein LOC100305971 [Glycin...   213   3e-53
ref|XP_003524818.1| PREDICTED: multiple RNA-binding domain-conta...   213   4e-53
ref|XP_003615725.1| Eukaryotic translation initiation factor 3 s...   181   1e-43
ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-conta...   148   1e-33
ref|XP_002533421.1| RNA binding protein, putative [Ricinus commu...   139   9e-31

>ref|NP_001235686.1| uncharacterized protein LOC100305971 [Glycine max]
           gi|255627149|gb|ACU13919.1| unknown [Glycine max]
          Length = 150

 Score =  213 bits (543), Expect = 3e-53
 Identities = 100/118 (84%), Positives = 107/118 (90%)
 Frame = +2

Query: 182 MRQDYPLASKIIVKNLPYSTGETTLQKEFSNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQ 361
           +R DYPLASKI+VKNLPYSTGETTLQKEFSNFGKIAEVK+VKD+ TKR KG AFIQYTCQ
Sbjct: 33  LRHDYPLASKIVVKNLPYSTGETTLQKEFSNFGKIAEVKMVKDMNTKRSKGIAFIQYTCQ 92

Query: 362 DDAMLALEIMDQKDFHGRTISVEIARLGWDDLGAPPRTSGPPKKWNLPEQVDEVDCWY 535
           DDAMLALE MDQKDF+GRTI VEIARLGWDD GA PR SGPPKKW+LPEQ + VDCWY
Sbjct: 93  DDAMLALETMDQKDFYGRTIGVEIARLGWDDFGASPRASGPPKKWDLPEQGEVVDCWY 150


>ref|XP_003524818.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           [Glycine max]
          Length = 149

 Score =  213 bits (542), Expect = 4e-53
 Identities = 109/149 (73%), Positives = 116/149 (77%), Gaps = 2/149 (1%)
 Frame = +2

Query: 95  MMMGMLAS-FPGYSTTXXXXXXXXXXXXXX-MRQDYPLASKIIVKNLPYSTGETTLQKEF 268
           M M MLAS F GY+                 +R DYPLASKI+VKNLPYSTGETTLQKEF
Sbjct: 1   MEMNMLASSFTGYAKPFASVNPSLLPFRASSLRHDYPLASKIVVKNLPYSTGETTLQKEF 60

Query: 269 SNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQDDAMLALEIMDQKDFHGRTISVEIARLGW 448
           SNFGKIAE KLVKD+ TKR KG AFIQYTCQDDAMLALE MDQKDF+GRTI VEIARLGW
Sbjct: 61  SNFGKIAEGKLVKDMNTKRSKGIAFIQYTCQDDAMLALETMDQKDFYGRTIGVEIARLGW 120

Query: 449 DDLGAPPRTSGPPKKWNLPEQVDEVDCWY 535
           DD GA PR SGPPKKW+LPEQ + VDCWY
Sbjct: 121 DDFGASPRASGPPKKWHLPEQGEVVDCWY 149


>ref|XP_003615725.1| Eukaryotic translation initiation factor 3 subunit G [Medicago
           truncatula] gi|355517060|gb|AES98683.1| Eukaryotic
           translation initiation factor 3 subunit G [Medicago
           truncatula]
          Length = 149

 Score =  181 bits (460), Expect = 1e-43
 Identities = 93/143 (65%), Positives = 106/143 (74%), Gaps = 1/143 (0%)
 Frame = +2

Query: 110 LASFPGYSTTXXXXXXXXXXXXXXMRQDYPLASKIIVKNLPYSTGETTLQKEFSNFGKIA 289
           LASFP Y T               MR +YPLASKI+VKNLPY TGE  LQK+FSNFGKIA
Sbjct: 8   LASFP-YYTPPNRSRLNLLRSSLSMRHEYPLASKILVKNLPYFTGENALQKKFSNFGKIA 66

Query: 290 EVKLVKDVYTKRPKGFAFIQYTCQDDAMLALEIMDQKDFHGRTISVEIARLGWDDLGAPP 469
           EV++VKDV T+R KG AFIQYTCQDDAMLALE MDQ+ F+GRTISVE+ +L   +    P
Sbjct: 67  EVQMVKDVSTERSKGLAFIQYTCQDDAMLALETMDQQSFYGRTISVELEKLDVHNFVGSP 126

Query: 470 RTSGPPKKWNLPE-QVDEVDCWY 535
           + SGPPKKWNLP  QV+EVDCWY
Sbjct: 127 KASGPPKKWNLPAVQVEEVDCWY 149


>ref|XP_004134540.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
           isoform 1 [Cucumis sativus]
           gi|449490646|ref|XP_004158665.1| PREDICTED: multiple
           RNA-binding domain-containing protein 1-like isoform 1
           [Cucumis sativus]
          Length = 158

 Score =  148 bits (374), Expect = 1e-33
 Identities = 78/120 (65%), Positives = 89/120 (74%), Gaps = 5/120 (4%)
 Frame = +2

Query: 191 DYPLASKIIVKNLPYSTGETTLQKEFSNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQDDA 370
           DYPLAS+++V+NLPYST E+ LQ+EFSNFG+IAEV L KD  TKRPKG+AFIQYTCQDDA
Sbjct: 40  DYPLASRLMVRNLPYSTNESRLQEEFSNFGEIAEVLLAKDRSTKRPKGYAFIQYTCQDDA 99

Query: 371 MLALEIMDQKDFHGRTISVEIARLGWDDLGAPPRTSGPPK-----KWNLPEQVDEVDCWY 535
           MLALE MD K F GR I VEIA  G    G  PR SGPPK     + N+ +Q D  DCWY
Sbjct: 100 MLALETMDCKIFDGRMIYVEIATPGSGSFGGYPRASGPPKERPNERANV-DQEDVADCWY 158


>ref|XP_002533421.1| RNA binding protein, putative [Ricinus communis]
           gi|223526734|gb|EEF28964.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 152

 Score =  139 bits (349), Expect = 9e-31
 Identities = 71/115 (61%), Positives = 87/115 (75%)
 Frame = +2

Query: 191 DYPLASKIIVKNLPYSTGETTLQKEFSNFGKIAEVKLVKDVYTKRPKGFAFIQYTCQDDA 370
           ++PLAS+IIVKNL YS GE++LQKEFSNFG+IAEVKLVKD   KR K F FIQYTCQDDA
Sbjct: 39  NFPLASRIIVKNLGYSVGESSLQKEFSNFGEIAEVKLVKDDERKRSKAFVFIQYTCQDDA 98

Query: 371 MLALEIMDQKDFHGRTISVEIARLGWDDLGAPPRTSGPPKKWNLPEQVDEVDCWY 535
           +LA+E MD+K F GR I V++A+ G +     P+ SGPP   +L EQ +  DCWY
Sbjct: 99  ILAMENMDRKIFDGRLIYVDLAKPGKETFRGYPKASGPP-PLHLREQDEVADCWY 152


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