BLASTX nr result

ID: Glycyrrhiza23_contig00013499 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013499
         (1311 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding prote...   525   e-147
ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional ...   521   e-145
ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding prote...   506   e-141
gb|AFK35123.1| unknown [Medicago truncatula]                          487   e-135
ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional ...   476   e-132

>ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 425

 Score =  525 bits (1353), Expect = e-147
 Identities = 262/318 (82%), Positives = 274/318 (86%), Gaps = 11/318 (3%)
 Frame = -2

Query: 923 MQYPAAAMVMPHHMLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-----------GSN 777
           MQYPAAAMVMPHHML                              H           GS 
Sbjct: 34  MQYPAAAMVMPHHMLPPQHYAPPPYVPFHHHHHHHQYAAPHVPNQHQQQQQHHHHQNGSG 93

Query: 776 GENKTVWVGDLHHWMDENYLHRCFASTGEISSIKVIRSKQTGLSEGYGFVEFYSHATAEK 597
           GENKT+W+GDLHHWMDENYLHRCFASTGEISSIKVIR+KQTGLSEGYGFVEFYSHATAEK
Sbjct: 94  GENKTIWIGDLHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEK 153

Query: 596 VLQNYAGMVMPNTDQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV 417
           VLQNYAG++MPNT+QPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV
Sbjct: 154 VLQNYAGILMPNTEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASV 213

Query: 416 YPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCSSRPMRIGAATPRKSS 237
           YPSVKAAKVVFDANTGRSKGYGFVRFGDDN+R+QAMT+MNGVYCSSRPMRIGAATPRKSS
Sbjct: 214 YPSVKAAKVVFDANTGRSKGYGFVRFGDDNQRTQAMTQMNGVYCSSRPMRIGAATPRKSS 273

Query: 236 GHQQEGQSNGTSNHSEADSTNTTIFVGGLDPNITDEDLRQPFSQYGEIVSVKIPVGKGCG 57
           GHQQ GQSNGT+N SEADSTNTTIFVGGLDPN++DEDLRQPFSQYGEIVSVKIPVGKGCG
Sbjct: 274 GHQQGGQSNGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCG 333

Query: 56  FVQFANRNNAEEALQKLN 3
           FVQFANRNNAEEALQKLN
Sbjct: 334 FVQFANRNNAEEALQKLN 351



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
 Frame = -2

Query: 779 NGENKTVWVGDLHHWMDENYLHRCFAST-GEISSIKVIRSKQTGLSEGYGFVEFYSHATA 603
           N  + +++VGDL   + ++ LH  FAS    + + KV+    TG S+GYGFV F      
Sbjct: 186 NVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNQR 245

Query: 602 EKVLQNYAGMVMPNTDQPFRLNWAT-------------FSTGDKGSDNVPDLSIFVGDLA 462
            + +    G+    + +P R+  AT               T ++   +  + +IFVG L 
Sbjct: 246 TQAMTQMNGVYC--SSRPMRIGAATPRKSSGHQQGGQSNGTANQSEADSTNTTIFVGGLD 303

Query: 461 ADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCS 282
            +V+D  L + F S Y  + + K+         KG GFV+F + N   +A+ K+NG    
Sbjct: 304 PNVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTSIG 356

Query: 281 SRPMRI 264
            + +R+
Sbjct: 357 KQTVRL 362


>ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 401

 Score =  521 bits (1343), Expect = e-145
 Identities = 260/308 (84%), Positives = 271/308 (87%), Gaps = 1/308 (0%)
 Frame = -2

Query: 923 MQYPAAA-MVMPHHMLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGSNGENKTVWVGD 747
           MQYPAAA MVMPHHML                               GS GENKT+W+GD
Sbjct: 24  MQYPAAAAMVMPHHMLPPQHYAPPPYVPYHHQYAAQPQHQHQN----GSGGENKTIWIGD 79

Query: 746 LHHWMDENYLHRCFASTGEISSIKVIRSKQTGLSEGYGFVEFYSHATAEKVLQNYAGMVM 567
           LHHWMDENYLHRCFASTGEISSIKVIR+KQTGLSEGYGFVEFYSHATAEKVLQNYAG++M
Sbjct: 80  LHHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHATAEKVLQNYAGILM 139

Query: 566 PNTDQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVV 387
           PN +QPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVV
Sbjct: 140 PNAEQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVV 199

Query: 386 FDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCSSRPMRIGAATPRKSSGHQQEGQSNG 207
           FDANTGRSKGYGFVRFGDDNER+QAMT+MNGVYCSSRPMRIGAATPRKSSGHQQ G SNG
Sbjct: 200 FDANTGRSKGYGFVRFGDDNERTQAMTQMNGVYCSSRPMRIGAATPRKSSGHQQGGLSNG 259

Query: 206 TSNHSEADSTNTTIFVGGLDPNITDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNA 27
           T+N SEADSTNTTIFVGGLDPN++DEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNA
Sbjct: 260 TANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNA 319

Query: 26  EEALQKLN 3
           EEALQKLN
Sbjct: 320 EEALQKLN 327



 Score = 67.4 bits (163), Expect = 8e-09
 Identities = 51/186 (27%), Positives = 87/186 (46%), Gaps = 14/186 (7%)
 Frame = -2

Query: 779 NGENKTVWVGDLHHWMDENYLHRCFAST-GEISSIKVIRSKQTGLSEGYGFVEFYSHATA 603
           N  + +++VGDL   + ++ LH  FAS    + + KV+    TG S+GYGFV F      
Sbjct: 162 NVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNER 221

Query: 602 EKVLQNYAGMVMPNTDQPFRLNWAT-------------FSTGDKGSDNVPDLSIFVGDLA 462
            + +    G+    + +P R+  AT               T ++   +  + +IFVG L 
Sbjct: 222 TQAMTQMNGVYC--SSRPMRIGAATPRKSSGHQQGGLSNGTANQSEADSTNTTIFVGGLD 279

Query: 461 ADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCS 282
            +V+D  L + F S Y  + + K+         KG GFV+F + N   +A+ K+NG    
Sbjct: 280 PNVSDEDLRQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTTIG 332

Query: 281 SRPMRI 264
            + +R+
Sbjct: 333 KQTVRL 338


>ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
           [Glycine max]
          Length = 409

 Score =  506 bits (1302), Expect = e-141
 Identities = 251/307 (81%), Positives = 266/307 (86%)
 Frame = -2

Query: 923 MQYPAAAMVMPHHMLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHGSNGENKTVWVGDL 744
           MQYPAAAMVM HHM+                               GS+ ENKTVWVGDL
Sbjct: 32  MQYPAAAMVMQHHMMPPQHYAPPQPYMAYHQYQQQVPQAHHL----GSSAENKTVWVGDL 87

Query: 743 HHWMDENYLHRCFASTGEISSIKVIRSKQTGLSEGYGFVEFYSHATAEKVLQNYAGMVMP 564
           HHWMDENYLHRCFASTGEISSIKVIR+KQTGLSEGYGFVEFYSH TA+KVLQNYAG++MP
Sbjct: 88  HHWMDENYLHRCFASTGEISSIKVIRNKQTGLSEGYGFVEFYSHGTADKVLQNYAGILMP 147

Query: 563 NTDQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVVF 384
           NT+QPFRLNWATFSTGDK SDNVPDLSIFVGDLAADVTDS+LHETF + YPSVKAAKVVF
Sbjct: 148 NTEQPFRLNWATFSTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVF 207

Query: 383 DANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCSSRPMRIGAATPRKSSGHQQEGQSNGT 204
           DANTGRSKGYGFVRFGDDNERSQAMT+MNGVYCSSRPMRIGAATPRK+SG+QQ  QSNGT
Sbjct: 208 DANTGRSKGYGFVRFGDDNERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQSNGT 267

Query: 203 SNHSEADSTNTTIFVGGLDPNITDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAE 24
           S+ SEADSTNTTIFVGGLDPN+T EDL+QPFSQYGEIVSVKIPVGKGCGFVQFANRNNAE
Sbjct: 268 SSQSEADSTNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAE 327

Query: 23  EALQKLN 3
           EALQKLN
Sbjct: 328 EALQKLN 334



 Score = 62.0 bits (149), Expect = 3e-07
 Identities = 49/186 (26%), Positives = 84/186 (45%), Gaps = 14/186 (7%)
 Frame = -2

Query: 779 NGENKTVWVGDLHHWMDENYLHRCFAST-GEISSIKVIRSKQTGLSEGYGFVEFYSHATA 603
           N  + +++VGDL   + ++ LH  F +    + + KV+    TG S+GYGFV F      
Sbjct: 169 NVPDLSIFVGDLAADVTDSMLHETFTNRYPSVKAAKVVFDANTGRSKGYGFVRFGDDNER 228

Query: 602 EKVLQNYAGMVMPNTDQPFRLNWAT-------------FSTGDKGSDNVPDLSIFVGDLA 462
            + +    G+    + +P R+  AT               T  +   +  + +IFVG L 
Sbjct: 229 SQAMTEMNGVYC--SSRPMRIGAATPRKTSGYQQGSQSNGTSSQSEADSTNTTIFVGGLD 286

Query: 461 ADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCS 282
            +VT   L + F S Y  + + K+         KG GFV+F + N   +A+ K+NG    
Sbjct: 287 PNVTAEDLKQPF-SQYGEIVSVKIPV------GKGCGFVQFANRNNAEEALQKLNGTTIG 339

Query: 281 SRPMRI 264
            + +R+
Sbjct: 340 KQMVRL 345


>gb|AFK35123.1| unknown [Medicago truncatula]
          Length = 425

 Score =  487 bits (1253), Expect = e-135
 Identities = 241/314 (76%), Positives = 263/314 (83%), Gaps = 7/314 (2%)
 Frame = -2

Query: 923 MQYPAAAMVMPHHMLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-------GSNGENK 765
           MQYP AAMVMPHHM+                              H       GSNGENK
Sbjct: 38  MQYPTAAMVMPHHMMPPQHYAPPPYVPYHHHHHQFQQPLHVPPHQHQNHQNQHGSNGENK 97

Query: 764 TVWVGDLHHWMDENYLHRCFASTGEISSIKVIRSKQTGLSEGYGFVEFYSHATAEKVLQN 585
           T+W+GDLH WMDE+YLHRCFASTGEI+S+KVIR+K +G+SEGYGF EF+SHATAEKVLQN
Sbjct: 98  TLWIGDLHSWMDESYLHRCFASTGEITSVKVIRNKHSGISEGYGFAEFFSHATAEKVLQN 157

Query: 584 YAGMVMPNTDQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSV 405
           YAG++MPN DQ FRLNWATFSTGDKGSDNV DLSIFVGDLAADVTDS+LHETF+S YPSV
Sbjct: 158 YAGILMPNADQAFRLNWATFSTGDKGSDNVTDLSIFVGDLAADVTDSVLHETFSSSYPSV 217

Query: 404 KAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCSSRPMRIGAATPRKSSGHQQ 225
           KAAKVV+DANTGRSKGYGFVRFGD++ERSQAMT+MNGVYCSSRPMRIGAATPRKSSGHQ 
Sbjct: 218 KAAKVVYDANTGRSKGYGFVRFGDESERSQAMTQMNGVYCSSRPMRIGAATPRKSSGHQP 277

Query: 224 EGQSNGTSNHSEADSTNTTIFVGGLDPNITDEDLRQPFSQYGEIVSVKIPVGKGCGFVQF 45
            GQ+NGTS+ SEADSTNTTIFVGGLD N+TDEDL+Q FSQYGEI SVKIPVGKGCGFVQF
Sbjct: 278 GGQTNGTSSQSEADSTNTTIFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQF 337

Query: 44  ANRNNAEEALQKLN 3
           ANRNNAEEALQKLN
Sbjct: 338 ANRNNAEEALQKLN 351



 Score = 73.6 bits (179), Expect = 1e-10
 Identities = 52/186 (27%), Positives = 90/186 (48%), Gaps = 14/186 (7%)
 Frame = -2

Query: 779 NGENKTVWVGDLHHWMDENYLHRCFAST-GEISSIKVIRSKQTGLSEGYGFVEFYSHATA 603
           N  + +++VGDL   + ++ LH  F+S+   + + KV+    TG S+GYGFV F   +  
Sbjct: 186 NVTDLSIFVGDLAADVTDSVLHETFSSSYPSVKAAKVVYDANTGRSKGYGFVRFGDESER 245

Query: 602 EKVLQNYAGMVMPNTDQPFRLNWAT-------------FSTGDKGSDNVPDLSIFVGDLA 462
            + +    G+    + +P R+  AT               T  +   +  + +IFVG L 
Sbjct: 246 SQAMTQMNGVYC--SSRPMRIGAATPRKSSGHQPGGQTNGTSSQSEADSTNTTIFVGGLD 303

Query: 461 ADVTDSLLHETFASVYPSVKAAKVVFDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCS 282
           ++VTD  L +TF S Y  + + K+         KG GFV+F + N   +A+ K+NG    
Sbjct: 304 SNVTDEDLKQTF-SQYGEIASVKIPV------GKGCGFVQFANRNNAEEALQKLNGTMIG 356

Query: 281 SRPMRI 264
            + +R+
Sbjct: 357 KQTVRL 362


>ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
           [Glycine max]
          Length = 410

 Score =  476 bits (1226), Expect = e-132
 Identities = 242/312 (77%), Positives = 260/312 (83%), Gaps = 5/312 (1%)
 Frame = -2

Query: 923 MQYPAAAMVMPHHMLSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXH-GSNGENKTVWVGD 747
           MQYPAAAMVM HHM+                              H GS+ ENKTVWVGD
Sbjct: 25  MQYPAAAMVMQHHMMPPQHYAPPPPQPYMAYHHYQQQLPHALHAHHQGSSAENKTVWVGD 84

Query: 746 LHHWMDENYLHRCFASTGEISSIKVIRSKQTGLSEGYGFVEFYSHATAEKVLQNYAGMVM 567
           LHHWMDENYLHRCFAS GEISSIKVIR+KQTGLSEGYGFVEFYSH TAEKVLQNYAG++M
Sbjct: 85  LHHWMDENYLHRCFASNGEISSIKVIRNKQTGLSEGYGFVEFYSHGTAEKVLQNYAGILM 144

Query: 566 PNTDQPFRLNWATFSTGDKGSDNVPDLSIFVGDLAADVTDSLLHETFASVYPSVKAAKVV 387
           PNT+QPFRLNWATF TGDK SDNVPDLSIFVGDLAADVTDS+LHETF++ YPSVKAAKVV
Sbjct: 145 PNTEQPFRLNWATFGTGDKRSDNVPDLSIFVGDLAADVTDSMLHETFSNRYPSVKAAKVV 204

Query: 386 FDANTGRSKGYGFVRFGDDNERSQAMTKMNGVYCSSRPMRIGAATPRKSSGHQQEGQSNG 207
           FDANTGRSKGYGFVRFGDD+ERSQAMT+MNGVYCSSRPMRIGAATPRK+SG+QQ  QSNG
Sbjct: 205 FDANTGRSKGYGFVRFGDDDERSQAMTEMNGVYCSSRPMRIGAATPRKTSGYQQGSQSNG 264

Query: 206 TSNHSEADSTNTTIFVGGLDPNITDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRN-- 33
            S+ SEADSTNTTIFVGGLD N+T EDL+QPFSQYGEIVSVKIPVGKGCGF    +R+  
Sbjct: 265 ISSQSEADSTNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFTICNSRSPG 324

Query: 32  --NAEEALQKLN 3
             NAEEALQKLN
Sbjct: 325 PKNAEEALQKLN 336


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