BLASTX nr result

ID: Glycyrrhiza23_contig00013436 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013436
         (1655 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicag...   476   e-163
ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|2...   387   e-130
ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   388   e-130
ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   387   e-128
ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP...   380   e-115

>ref|XP_003616240.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
            gi|355517575|gb|AES99198.1| DEAD-box ATP-dependent RNA
            helicase [Medicago truncatula]
          Length = 497

 Score =  476 bits (1226), Expect(2) = e-163
 Identities = 238/289 (82%), Positives = 256/289 (88%)
 Frame = +1

Query: 211  RLLREAYQSWLPTVLELTQSNDEGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRL 390
            RLLREAYQSWLPTVLEL QSND+G   P+ S FPCS  ALRTRRRCGVERGFKDKPYPRL
Sbjct: 209  RLLREAYQSWLPTVLELIQSNDDGFSLPSASFFPCSASALRTRRRCGVERGFKDKPYPRL 268

Query: 391  AKMVLSATLTQDPGRXXXXXXXXXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALL 570
            AKMVLSATLTQDPGR            KAGQMRYRLPENLESYKLICE K+KPLYL+ALL
Sbjct: 269  AKMVLSATLTQDPGRLIQLNLHHPLLLKAGQMRYRLPENLESYKLICEKKVKPLYLIALL 328

Query: 571  KSLGGEKCIVFTKSVESTHRLCKLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQ 750
            KSLG EKC+VFTKSV+STHRLC+LLNCF DL+IDIKEYS LQHQRVRSKTLNEFRKG FQ
Sbjct: 329  KSLGEEKCLVFTKSVDSTHRLCQLLNCFEDLRIDIKEYSSLQHQRVRSKTLNEFRKGVFQ 388

Query: 751  VLVSSDALTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSTDEVRRF 930
            VL+SSDALTRGMDVEGVRNVINYD+PK+IKT+VHRAGRTARAGQTGRCFTLMS DEVRRF
Sbjct: 389  VLLSSDALTRGMDVEGVRNVINYDVPKFIKTHVHRAGRTARAGQTGRCFTLMSEDEVRRF 448

Query: 931  KKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD 1077
            KKL+ KAEG SCL+HIVPSS  EALN TY+SALTKYK+II + RKKPK+
Sbjct: 449  KKLIGKAEGGSCLDHIVPSSQIEALNTTYESALTKYKEIISKTRKKPKN 497



 Score =  127 bits (319), Expect(2) = e-163
 Identities = 61/70 (87%), Positives = 66/70 (94%)
 Frame = +2

Query: 2   LAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRFQSKVDILVATPGRLMDHINTTKG 181
           LAVGQSS+ADEISELVE+PAR+ GTCYDP  +SLPRFQSKVDILVATPGRLMDHINTT G
Sbjct: 134 LAVGQSSLADEISELVEMPARDIGTCYDPHCISLPRFQSKVDILVATPGRLMDHINTTIG 193

Query: 182 FTLEHLYYLI 211
           FTLEHLYYL+
Sbjct: 194 FTLEHLYYLV 203


>ref|XP_002305441.1| predicted protein [Populus trichocarpa] gi|222848405|gb|EEE85952.1|
            predicted protein [Populus trichocarpa]
          Length = 518

 Score =  387 bits (993), Expect(2) = e-130
 Identities = 192/280 (68%), Positives = 223/280 (79%)
 Frame = +1

Query: 211  RLLREAYQSWLPTVLELTQSNDEGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRL 390
            RLLRE+YQSWLPTVL+LT+  DE L    ++  PC+ G+L+T RRCGVERGFK K YPRL
Sbjct: 212  RLLRESYQSWLPTVLKLTRPYDESLVPGVNNFLPCASGSLKTIRRCGVERGFKGKSYPRL 271

Query: 391  AKMVLSATLTQDPGRXXXXXXXXXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALL 570
            AKMVLSATLTQDP +              GQ RY+LPE LESYKLIC +KLKPLYLVA+L
Sbjct: 272  AKMVLSATLTQDPSKLAQLNLHHPLFLTTGQRRYQLPEKLESYKLICVSKLKPLYLVAVL 331

Query: 571  KSLGGEKCIVFTKSVESTHRLCKLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQ 750
            + LGGEKCIVFT SVESTHRLC LLN FGDL++ IKEYSGLQ Q VRSKTL  FR+GE Q
Sbjct: 332  QHLGGEKCIVFTSSVESTHRLCTLLNFFGDLKVKIKEYSGLQRQSVRSKTLKAFREGEIQ 391

Query: 751  VLVSSDALTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSTDEVRRF 930
            VLVSSDA+TRGMD+EGVRN+INYDMP Y+KTYVHRAGRTARAGQTGRC TL+ T EV+RF
Sbjct: 392  VLVSSDAMTRGMDIEGVRNIINYDMPAYVKTYVHRAGRTARAGQTGRCITLLRTHEVKRF 451

Query: 931  KKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQII 1050
            KKL+QKA+  SC  + +PSS  ++L+P Y SAL K K+ +
Sbjct: 452  KKLLQKADNDSCPIYSIPSSSVKSLHPFYLSALEKLKETV 491



 Score =  106 bits (265), Expect(2) = e-130
 Identities = 54/70 (77%), Positives = 58/70 (82%)
 Frame = +2

Query: 2   LAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRFQSKVDILVATPGRLMDHINTTKG 181
           LAVGQSS+ADEISEL++ P  EAG CYDPQ V L   QS VDILVATPGRLMDHI TTKG
Sbjct: 138 LAVGQSSIADEISELIKKPEHEAGICYDPQDV-LQELQSSVDILVATPGRLMDHITTTKG 196

Query: 182 FTLEHLYYLI 211
           FTLEHL YL+
Sbjct: 197 FTLEHLCYLV 206


>ref|XP_002279094.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1 [Vitis vinifera]
            gi|297740757|emb|CBI30939.3| unnamed protein product
            [Vitis vinifera]
          Length = 516

 Score =  388 bits (996), Expect(2) = e-130
 Identities = 193/291 (66%), Positives = 228/291 (78%)
 Frame = +1

Query: 211  RLLREAYQSWLPTVLELTQSNDEGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRL 390
            RLLREAYQSWLPTVL+LT+S+DE LF    ++ P + G++ T RRCGVERGFK + YPRL
Sbjct: 209  RLLREAYQSWLPTVLQLTRSSDESLFPCGKTILPSTFGSMNTIRRCGVERGFKGRSYPRL 268

Query: 391  AKMVLSATLTQDPGRXXXXXXXXXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALL 570
             K+VLSATLTQDP +             AGQ RY+LPE L+S+KLICE+KLKPLYLVALL
Sbjct: 269  VKIVLSATLTQDPSKLALLDLHHPLLLTAGQRRYQLPEKLKSFKLICESKLKPLYLVALL 328

Query: 571  KSLGGEKCIVFTKSVESTHRLCKLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQ 750
            + LGGEKCIVFT SVES HRLC LLN FGDLQI I EYSGLQHQRVRSKTL EFR G+ Q
Sbjct: 329  RDLGGEKCIVFTSSVESAHRLCTLLNFFGDLQIKIGEYSGLQHQRVRSKTLEEFRGGKIQ 388

Query: 751  VLVSSDALTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSTDEVRRF 930
            VL+SSD +TRGMDVEGVRNVINYD+PK+IKTY+HRAGRTARAGQTGRCFTL+  DE +RF
Sbjct: 389  VLISSDGMTRGMDVEGVRNVINYDVPKFIKTYIHRAGRTARAGQTGRCFTLLRKDEDKRF 448

Query: 931  KKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD*N 1083
            K+L+QKA+  SC  H V S+  EAL+  Y SAL K K+ ++ +  + +  N
Sbjct: 449  KQLLQKADSDSCPVHSVASNSIEALHSVYVSALEKLKETVVSETTRKRKIN 499



 Score =  105 bits (262), Expect(2) = e-130
 Identities = 52/70 (74%), Positives = 60/70 (85%)
 Frame = +2

Query: 2   LAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRFQSKVDILVATPGRLMDHINTTKG 181
           LAVGQ+S+ADEISEL++ P  EAG CYDP+ +SL   QS VDILVATPGRLMDHINTTKG
Sbjct: 135 LAVGQTSIADEISELIKRPKLEAGICYDPEDISL-ELQSSVDILVATPGRLMDHINTTKG 193

Query: 182 FTLEHLYYLI 211
           FTL+HL YL+
Sbjct: 194 FTLKHLRYLV 203


>ref|XP_004134588.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus] gi|449490565|ref|XP_004158642.1| PREDICTED:
            DEAD-box ATP-dependent RNA helicase 1-like [Cucumis
            sativus]
          Length = 517

 Score =  387 bits (995), Expect(2) = e-128
 Identities = 198/300 (66%), Positives = 230/300 (76%)
 Frame = +1

Query: 211  RLLREAYQSWLPTVLELTQSNDEGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRL 390
            RLLREAYQSWLPTVL+LT ++D  +  P+    PCS G+L+T RR GVERGFK KPYPRL
Sbjct: 209  RLLREAYQSWLPTVLQLTHADDSSIIFPSYISNPCSDGSLKTIRRFGVERGFKGKPYPRL 268

Query: 391  AKMVLSATLTQDPGRXXXXXXXXXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALL 570
            AKMVLSATLTQDPG+              G+ RY+LPE LESY +ICE+KLKPLYLVALL
Sbjct: 269  AKMVLSATLTQDPGKLAQLDLHHPLFLTTGKRRYKLPEKLESYMMICESKLKPLYLVALL 328

Query: 571  KSLGGEKCIVFTKSVESTHRLCKLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQ 750
            +SLG EKCIVFT SVESTHRLC LLN F DL++ IKEYSGLQ Q +RSKTLN FR GE Q
Sbjct: 329  QSLGEEKCIVFTSSVESTHRLCSLLNFFEDLELKIKEYSGLQRQSLRSKTLNAFRGGEIQ 388

Query: 751  VLVSSDALTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSTDEVRRF 930
            VLVSSDA+TRGMDVEGV+NVINYDMP +IKTY+HRAGRTARAGQ+GRCFTL+  DEV+RF
Sbjct: 389  VLVSSDAMTRGMDVEGVKNVINYDMPAFIKTYIHRAGRTARAGQSGRCFTLLRKDEVKRF 448

Query: 931  KKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD*NLLNRAKRMK 1110
            KKL+QKA+  SC  H +PSS  E L PTY SAL K K+ +  +  +       +RA + K
Sbjct: 449  KKLLQKADNDSCPVHNLPSSSIEFLQPTYVSALEKLKEKVESETSRKSTITSSSRAGKQK 508



 Score = 99.8 bits (247), Expect(2) = e-128
 Identities = 51/70 (72%), Positives = 56/70 (80%)
 Frame = +2

Query: 2   LAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRFQSKVDILVATPGRLMDHINTTKG 181
           LAVGQSS+ADEISEL++ P  EAG CYDP    L   QS VDILVATPGRLMDHIN TKG
Sbjct: 135 LAVGQSSIADEISELIKRPKLEAGICYDPDDF-LVELQSSVDILVATPGRLMDHINFTKG 193

Query: 182 FTLEHLYYLI 211
           FTL+HL YL+
Sbjct: 194 FTLQHLRYLV 203


>ref|XP_003531800.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
            1-like [Glycine max]
          Length = 617

 Score =  380 bits (975), Expect(2) = e-115
 Identities = 204/297 (68%), Positives = 225/297 (75%)
 Frame = +1

Query: 211  RLLREAYQSWLPTVLELTQSNDEGLFQPADSVFPCSLGALRTRRRCGVERGFKDKPYPRL 390
            RLLRE YQSWLPTVL+LTQS                                      RL
Sbjct: 360  RLLREDYQSWLPTVLKLTQS--------------------------------------RL 381

Query: 391  AKMVLSATLTQDPGRXXXXXXXXXXXXKAGQMRYRLPENLESYKLICETKLKPLYLVALL 570
            AK+VLSATLT+DPGR             AG+MRYRLPE LE YKLICE K+KPLYLVALL
Sbjct: 382  AKIVLSATLTRDPGRLAQLNLHHPLFLSAGKMRYRLPEYLECYKLICERKVKPLYLVALL 441

Query: 571  KSLGGEKCIVFTKSVESTHRLCKLLNCFGDLQIDIKEYSGLQHQRVRSKTLNEFRKGEFQ 750
            KSLG EKCIVFT+SVESTH LCKLLNCFGDL+I IKE+SGL+HQRVRSKT+ EFR+GEFQ
Sbjct: 442  KSLGEEKCIVFTRSVESTHHLCKLLNCFGDLKIGIKEFSGLKHQRVRSKTVGEFRRGEFQ 501

Query: 751  VLVSSDALTRGMDVEGVRNVINYDMPKYIKTYVHRAGRTARAGQTGRCFTLMSTDEVRRF 930
            VLVSSDA+TRGMDVEGVRNVINYDMPKY KTYVHRAGRTARAGQTGRCFTLMS DEV RF
Sbjct: 502  VLVSSDAMTRGMDVEGVRNVINYDMPKYTKTYVHRAGRTARAGQTGRCFTLMSKDEVXRF 561

Query: 931  KKLMQKAEGSSCLEHIVPSSLTEALNPTYQSALTKYKQIILEKRKKPKD*NLLNRAK 1101
            KKLM+KAE S CLE+ VPSSL EAL+ TYQSALTK K+ ILE R+KP+  +L+NR+K
Sbjct: 562  KKLMKKAEASDCLEYTVPSSLIEALHSTYQSALTKLKEKILESRRKPRI-SLVNRSK 617



 Score = 65.5 bits (158), Expect(2) = e-115
 Identities = 37/70 (52%), Positives = 48/70 (68%)
 Frame = +2

Query: 2   LAVGQSSVADEISELVEVPAREAGTCYDPQRVSLPRFQSKVDILVATPGRLMDHINTTKG 181
           LA GQSS+  E+S L+ +P  + G   DP  +S   FQSKVDILVATPGRL+DH+N    
Sbjct: 290 LAAGQSSLRHELSSLIYLPGEDDGP--DPGFLSPLWFQSKVDILVATPGRLVDHVNK--- 344

Query: 182 FTLEHLYYLI 211
            +L+HL YL+
Sbjct: 345 LSLKHLRYLV 354


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