BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013401
         (842 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001242466.1| uncharacterized protein LOC100784528 [Glycin...   429   e-118
ref|XP_003555800.1| PREDICTED: RNA polymerase II-associated prot...   417   e-114
ref|XP_003527230.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymera...   416   e-114
ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated prot...   312   7e-83
emb|CBI39598.3| unnamed protein product [Vitis vinifera]              312   7e-83

>ref|NP_001242466.1| uncharacterized protein LOC100784528 [Glycine max]
           gi|255641877|gb|ACU21207.1| unknown [Glycine max]
          Length = 454

 Score =  429 bits (1104), Expect = e-118
 Identities = 225/287 (78%), Positives = 242/287 (84%), Gaps = 7/287 (2%)
 Frame = +1

Query: 1   VGVEKTSRGDAISFDHARNSSAQYDFSRDNDPFSRVHSSFVSEDVPDATSEKDLGNEFFK 180
           VGVEK S+GD ISFD ARNS  QYD SR NDPF+RVHSSFV EDVPDA SEKDLGNEFFK
Sbjct: 32  VGVEKASKGDTISFDRARNSPGQYDLSRINDPFNRVHSSFVPEDVPDAVSEKDLGNEFFK 91

Query: 181 QKKFKEAIDCYSRSIALSPTAVAYANRAMAYIKLRRFQEAEDDCTEALNLDDRYIKAYSR 360
           QKKFKEA DCYSRSIALSPTAVAYANRAMA IKLRRFQEAEDDCTEALNLDDRYIKAYSR
Sbjct: 92  QKKFKEARDCYSRSIALSPTAVAYANRAMANIKLRRFQEAEDDCTEALNLDDRYIKAYSR 151

Query: 361 RATARKELGKVKESMEDAEFAMRLEPNNQEVKKQYADAKSLCEKEILQKAAGALRSTVQG 540
            ATARKELGK+KESM+DA FA+RLEPNNQE+KKQYADAKSL EK+ILQKA+GALRSTVQG
Sbjct: 152 GATARKELGKIKESMDDAAFALRLEPNNQEIKKQYADAKSLYEKDILQKASGALRSTVQG 211

Query: 541 TQQVGKSETKVNGGSVHSVSHGTQKSGPAEAYHHTKGNEWQIPAKESLAVEEIDNRDTEA 720
           TQ+  KSE K+NG S+  +SH TQKSG AE  HH K NE QI  KESL  E++D+R+T+A
Sbjct: 212 TQKSQKSEEKINGDSIQPISHSTQKSGLAEVNHHKKDNEQQILVKESLLTEDVDSRETKA 271

Query: 721 RSRTQGQ-------GYSASNSLEQRNHRPRKQEMKASVQQLASRAAS 840
           RSR Q Q       G SASNSLEQRNH   K EMKASVQQLASRAAS
Sbjct: 272 RSRPQSQGGDGSKEGLSASNSLEQRNHSITKLEMKASVQQLASRAAS 318


>ref|XP_003555800.1| PREDICTED: RNA polymerase II-associated protein 3-like [Glycine
           max]
          Length = 455

 Score =  417 bits (1073), Expect = e-114
 Identities = 221/287 (77%), Positives = 239/287 (83%), Gaps = 7/287 (2%)
 Frame = +1

Query: 1   VGVEKTSRGDAISFDHARNSSAQYDFSRDNDPFSRVHSSFVSEDVPDATSEKDLGNEFFK 180
           VGVEK S+GD ISFD+ARNS  QYD SR N     +HSSFV EDVPDA SEKDLGNEFFK
Sbjct: 37  VGVEKASKGDTISFDNARNSPGQYDLSRIN----HLHSSFVPEDVPDAASEKDLGNEFFK 92

Query: 181 QKKFKEAIDCYSRSIALSPTAVAYANRAMAYIKLRRFQEAEDDCTEALNLDDRYIKAYSR 360
           QKKFKEA DCYSRSIALSPTAVAYANRAMA IKLRRFQEAEDDCTEALNLDDRYIKAYSR
Sbjct: 93  QKKFKEARDCYSRSIALSPTAVAYANRAMANIKLRRFQEAEDDCTEALNLDDRYIKAYSR 152

Query: 361 RATARKELGKVKESMEDAEFAMRLEPNNQEVKKQYADAKSLCEKEILQKAAGALRSTVQG 540
           RATARKELGK+KESM+DAEFA+RLEPNNQE+KKQYADAKS  EK+ILQKA+G LRSTVQG
Sbjct: 153 RATARKELGKIKESMDDAEFALRLEPNNQEIKKQYADAKSFYEKDILQKASGVLRSTVQG 212

Query: 541 TQQVGKSETKVNGGSVHSVSHGTQKSGPAEAYHHTKGNEWQIPAKESLAVEEIDNRDTEA 720
           TQ+VGKSE KVNG S+H +S  TQKSG AE +HH K N+ QI  KESL  E++D R+ +A
Sbjct: 213 TQKVGKSEEKVNGDSIHPISRSTQKSGLAEVHHHKKDNKRQILVKESLLTEDVDGREIKA 272

Query: 721 RSRTQGQ-------GYSASNSLEQRNHRPRKQEMKASVQQLASRAAS 840
           RS  Q Q       G SASNSLEQRNHR  K EMKASVQQLASRAAS
Sbjct: 273 RSWPQSQGDDGSKGGLSASNSLEQRNHRITKPEMKASVQQLASRAAS 319


>ref|XP_003527230.1| PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II-associated
           protein 3-like [Glycine max]
          Length = 474

 Score =  416 bits (1068), Expect = e-114
 Identities = 219/287 (76%), Positives = 240/287 (83%), Gaps = 7/287 (2%)
 Frame = +1

Query: 1   VGVEKTSRGDAISFDHARNSSAQYDFSRDNDPFSRVHSSFVSEDVPDATSEKDLGNEFFK 180
           VGV+K S+GD I F +ARNS  QYD SR N     +HSSFV EDVPDA SEKDLGNEFFK
Sbjct: 56  VGVKKASKGDTIFFYNARNSPGQYDLSRIN----HLHSSFVPEDVPDAASEKDLGNEFFK 111

Query: 181 QKKFKEAIDCYSRSIALSPTAVAYANRAMAYIKLRRFQEAEDDCTEALNLDDRYIKAYSR 360
           QKKFKEA DCYSRSIALSPTAVAYANRAMA IKLRRFQEAEDDCTEALNLDDRYIKAYSR
Sbjct: 112 QKKFKEARDCYSRSIALSPTAVAYANRAMANIKLRRFQEAEDDCTEALNLDDRYIKAYSR 171

Query: 361 RATARKELGKVKESMEDAEFAMRLEPNNQEVKKQYADAKSLCEKEILQKAAGALRSTVQG 540
           RATARKELGK+KESM+DAEFA+RLEPNNQE+KKQYADAKS  EK+ILQKA+G LRSTVQG
Sbjct: 172 RATARKELGKIKESMDDAEFALRLEPNNQEIKKQYADAKSFYEKDILQKASGVLRSTVQG 231

Query: 541 TQQVGKSETKVNGGSVHSVSHGTQKSGPAEAYHHTKGNEWQIPAKESLAVEEIDNRDTEA 720
           TQ+VGKSE KVNG S+H +SH TQKSG AE +HH K NE +I  KESL  E++D+R+ +A
Sbjct: 232 TQKVGKSEEKVNGDSIHPISHSTQKSGLAEVHHHKKDNERKILVKESLLTEDVDSREIKA 291

Query: 721 RSRTQGQ-------GYSASNSLEQRNHRPRKQEMKASVQQLASRAAS 840
           RSR Q Q       G SASNSLEQRNHR  K EMKASV+QLASRAAS
Sbjct: 292 RSRPQSQGDDGSKGGLSASNSLEQRNHRITKPEMKASVEQLASRAAS 338


>ref|XP_002277910.2| PREDICTED: RNA polymerase II-associated protein 3-like [Vitis
           vinifera]
          Length = 474

 Score =  312 bits (799), Expect = 7e-83
 Identities = 168/282 (59%), Positives = 220/282 (78%), Gaps = 7/282 (2%)
 Frame = +1

Query: 16  TSRGDAISFDHARNSSAQYDFSRDNDPFSRVHSSFVSED-VPDATSEKDLGNEFFKQKKF 192
           +S G ++    +R+ + Q+++SR++D  SR+ SSF++E+ +PDA SEK+LGNE+FKQ+KF
Sbjct: 62  SSPGVSLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKF 121

Query: 193 KEAIDCYSRSIALSPTAVAYANRAMAYIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 372
           KEAIDCYSRSIAL PTAVAYANRAMAYIK++RF+EAEDDC EALNLDDRYIKAYSRRATA
Sbjct: 122 KEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATA 181

Query: 373 RKELGKVKESMEDAEFAMRLEPNNQEVKKQYADAKSLCEKEILQKAAGALRSTVQGTQQV 552
           RKELGK KE+ EDAEFA+RLEP NQE+KKQYA+AKSL EKEILQKA+GAL+S+VQG Q+V
Sbjct: 182 RKELGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKV 241

Query: 553 GKSETKVNGGS--VHSVSHGTQKSGPAEAYHHTKGNEWQIPAKESLAVEEIDNRDTEARS 726
           GKS  +VN  +  V S+S  +Q +G A        + + +PA  S ++EE +N+ T  RS
Sbjct: 242 GKSVVEVNADTQGVRSISSSSQGAGEAAIQ-----DRFMVPANTSTSMEETENKGTGNRS 296

Query: 727 RTQGQGYSA--SNSLE--QRNHRPRKQEMKASVQQLASRAAS 840
           +  G   +A  ++ LE    NH+  ++EMK+S+Q+LASRAAS
Sbjct: 297 KENGYLENAVQNSGLEDVMSNHKTGQREMKSSLQELASRAAS 338


>emb|CBI39598.3| unnamed protein product [Vitis vinifera]
          Length = 1097

 Score =  312 bits (799), Expect = 7e-83
 Identities = 168/282 (59%), Positives = 220/282 (78%), Gaps = 7/282 (2%)
 Frame = +1

Query: 16   TSRGDAISFDHARNSSAQYDFSRDNDPFSRVHSSFVSED-VPDATSEKDLGNEFFKQKKF 192
            +S G ++    +R+ + Q+++SR++D  SR+ SSF++E+ +PDA SEK+LGNE+FKQ+KF
Sbjct: 685  SSPGVSLRLGQSRSDTRQHEYSRNHDAISRISSSFMTEESLPDAASEKELGNEYFKQRKF 744

Query: 193  KEAIDCYSRSIALSPTAVAYANRAMAYIKLRRFQEAEDDCTEALNLDDRYIKAYSRRATA 372
            KEAIDCYSRSIAL PTAVAYANRAMAYIK++RF+EAEDDC EALNLDDRYIKAYSRRATA
Sbjct: 745  KEAIDCYSRSIALLPTAVAYANRAMAYIKIKRFREAEDDCMEALNLDDRYIKAYSRRATA 804

Query: 373  RKELGKVKESMEDAEFAMRLEPNNQEVKKQYADAKSLCEKEILQKAAGALRSTVQGTQQV 552
            RKELGK KE+ EDAEFA+RLEP NQE+KKQYA+AKSL EKEILQKA+GAL+S+VQG Q+V
Sbjct: 805  RKELGKFKEATEDAEFALRLEPQNQEIKKQYAEAKSLYEKEILQKASGALKSSVQGLQKV 864

Query: 553  GKSETKVNGGS--VHSVSHGTQKSGPAEAYHHTKGNEWQIPAKESLAVEEIDNRDTEARS 726
            GKS  +VN  +  V S+S  +Q +G A        + + +PA  S ++EE +N+ T  RS
Sbjct: 865  GKSVVEVNADTQGVRSISSSSQGAGEAAIQ-----DRFMVPANTSTSMEETENKGTGNRS 919

Query: 727  RTQGQGYSA--SNSLE--QRNHRPRKQEMKASVQQLASRAAS 840
            +  G   +A  ++ LE    NH+  ++EMK+S+Q+LASRAAS
Sbjct: 920  KENGYLENAVQNSGLEDVMSNHKTGQREMKSSLQELASRAAS 961