BLASTX nr result

ID: Glycyrrhiza23_contig00013336 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013336
         (523 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated f...   342   1e-92
ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated f...   341   3e-92
ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated f...   341   3e-92
ref|XP_003605629.1| TATA-binding protein-associated factor [Medi...   338   2e-91
ref|XP_002319739.1| chromatin remodeling complex subunit [Populu...   297   5e-79

>ref|XP_003540105.1| PREDICTED: TATA-binding protein-associated factor 172-like [Glycine
            max]
          Length = 2047

 Score =  342 bits (878), Expect = 1e-92
 Identities = 169/174 (97%), Positives = 171/174 (98%)
 Frame = +1

Query: 1    PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGISRNAEDLHFLE 180
            PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEG+SRNAEDL FLE
Sbjct: 1371 PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGVSRNAEDLQFLE 1430

Query: 181  QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 360
            QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV
Sbjct: 1431 QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 1490

Query: 361  ASDIAEHRTQFGNEDLLPSLIVCPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 522
            ASDIAEHRT  GNEDLLPSLI+CPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ
Sbjct: 1491 ASDIAEHRTSIGNEDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 1544


>ref|XP_003534431.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 2
            [Glycine max]
          Length = 2064

 Score =  341 bits (875), Expect = 3e-92
 Identities = 168/174 (96%), Positives = 171/174 (98%)
 Frame = +1

Query: 1    PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGISRNAEDLHFLE 180
            PLLVVPLLRCMSDCDQSVRQSVTHSFA+LVPLLPLARGLPQPIGLGEG+SRNAEDL FLE
Sbjct: 1388 PLLVVPLLRCMSDCDQSVRQSVTHSFASLVPLLPLARGLPQPIGLGEGVSRNAEDLQFLE 1447

Query: 181  QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 360
            QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV
Sbjct: 1448 QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 1507

Query: 361  ASDIAEHRTQFGNEDLLPSLIVCPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 522
            ASDIAEHRT  GNEDLLPSLI+CPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ
Sbjct: 1508 ASDIAEHRTSIGNEDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 1561


>ref|XP_003534430.1| PREDICTED: TATA-binding protein-associated factor 172-like isoform 1
            [Glycine max]
          Length = 2047

 Score =  341 bits (875), Expect = 3e-92
 Identities = 168/174 (96%), Positives = 171/174 (98%)
 Frame = +1

Query: 1    PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGISRNAEDLHFLE 180
            PLLVVPLLRCMSDCDQSVRQSVTHSFA+LVPLLPLARGLPQPIGLGEG+SRNAEDL FLE
Sbjct: 1371 PLLVVPLLRCMSDCDQSVRQSVTHSFASLVPLLPLARGLPQPIGLGEGVSRNAEDLQFLE 1430

Query: 181  QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 360
            QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV
Sbjct: 1431 QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 1490

Query: 361  ASDIAEHRTQFGNEDLLPSLIVCPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 522
            ASDIAEHRT  GNEDLLPSLI+CPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ
Sbjct: 1491 ASDIAEHRTSIGNEDLLPSLIICPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 1544


>ref|XP_003605629.1| TATA-binding protein-associated factor [Medicago truncatula]
            gi|355506684|gb|AES87826.1| TATA-binding
            protein-associated factor [Medicago truncatula]
          Length = 1477

 Score =  338 bits (868), Expect = 2e-91
 Identities = 166/174 (95%), Positives = 171/174 (98%)
 Frame = +1

Query: 1    PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGISRNAEDLHFLE 180
            PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARG+PQPIGLGEG+SRNAEDLHFLE
Sbjct: 802  PLLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGVPQPIGLGEGVSRNAEDLHFLE 861

Query: 181  QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 360
            QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV
Sbjct: 862  QLLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIV 921

Query: 361  ASDIAEHRTQFGNEDLLPSLIVCPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 522
            AS+I E RTQ GNEDLLPSLI+CPSTLVGHWAFEIEK+IDVSVISSLQYVGSAQ
Sbjct: 922  ASEIVERRTQIGNEDLLPSLIICPSTLVGHWAFEIEKFIDVSVISSLQYVGSAQ 975


>ref|XP_002319739.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222858115|gb|EEE95662.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 2045

 Score =  297 bits (761), Expect = 5e-79
 Identities = 149/173 (86%), Positives = 156/173 (90%)
 Frame = +1

Query: 4    LLVVPLLRCMSDCDQSVRQSVTHSFAALVPLLPLARGLPQPIGLGEGISRNAEDLHFLEQ 183
            LLVVPLLRCMSDCD SVRQSVT SFAALVPLLPLARGL  P GL EG++RNAED  FLEQ
Sbjct: 1370 LLVVPLLRCMSDCDHSVRQSVTRSFAALVPLLPLARGLAPPSGLNEGLARNAEDAQFLEQ 1429

Query: 184  LLDNSHIEDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVA 363
            LLDNSHI+DYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVA
Sbjct: 1430 LLDNSHIDDYKLCTELKVTLRRYQQEGINWLAFLKRFKLHGILCDDMGLGKTLQASAIVA 1489

Query: 364  SDIAEHRTQFGNEDLLPSLIVCPSTLVGHWAFEIEKYIDVSVISSLQYVGSAQ 522
            SD+AE R     ED+ PSLIVCPSTLVGHWAFEIEKYID S+IS+LQY GSAQ
Sbjct: 1490 SDVAEFRALNNCEDVQPSLIVCPSTLVGHWAFEIEKYIDASLISTLQYSGSAQ 1542


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