BLASTX nr result
ID: Glycyrrhiza23_contig00013320
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Glycyrrhiza23_contig00013320
(1237 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula] 87 7e-37
ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|35548... 79 2e-34
ref|XP_002518417.1| conserved hypothetical protein [Ricinus comm... 63 2e-18
ref|XP_003576041.1| PREDICTED: uncharacterized protein LOC100844... 54 1e-16
ref|NP_567650.2| uncharacterized protein [Arabidopsis thaliana] ... 59 2e-16
>gb|ABD32666.1| conserved hypothetical protein [Medicago truncatula]
Length = 347
Score = 86.7 bits (213), Expect(4) = 7e-37
Identities = 62/136 (45%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Frame = +2
Query: 548 VRVGSGS-IWEGAAPFGRFVAKNPKPPSLNHDNSKRETPTSRRCEVXXXXXXXXXXXXXV 724
V VG S +W+ G+ + + S K+E SRR +V V
Sbjct: 220 VHVGRNSPVWQVRRGGGKNSDQQTQQGSNTDKELKKEATVSRRSKVVSGGGGKAK----V 275
Query: 725 LNLNVPPTMCIGYRHQLSCRSDENSAIGVTVSGGSDHTRGSNSG--------HANVGGKL 880
L+LNVP MCIGYRH LSCRSDENSAIG VSGG RG G GG L
Sbjct: 276 LSLNVP--MCIGYRHHLSCRSDENSAIG--VSGGVAVNRGGGDGGGGECHHHDEGSGGNL 331
Query: 881 FYLRNFFTKKSIVTSH 928
F LRN FTKKSIVTSH
Sbjct: 332 FNLRNLFTKKSIVTSH 347
Score = 68.9 bits (167), Expect(4) = 7e-37
Identities = 50/113 (44%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +3
Query: 201 ITVTDSATSTASNSKRWIDIFRKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXX 380
IT + S+ ST S SKRW DIFRK
Sbjct: 98 ITESSSSASTFSGSKRWKDIFRKGEKNNTEDKEKEKEKEKEKKNKDKKKERKN----GNG 153
Query: 381 XXXXXELNINIRPFSRSRFAGNSGTTRPK-----SLTQKVNSAPCSRSNSADE 524
ELNINI PFSRSR AGN+ TTRPK +T+KVNSAPCSRSNSA E
Sbjct: 154 ANSAAELNINIWPFSRSRSAGNT-TTRPKFFTGAPVTRKVNSAPCSRSNSAGE 205
Score = 36.2 bits (82), Expect(4) = 7e-37
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 2 CSSPEFEFWMVRNPS 46
C+SPEFEFWM+RNPS
Sbjct: 19 CNSPEFEFWMLRNPS 33
Score = 30.4 bits (67), Expect(4) = 7e-37
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 8/40 (20%)
Frame = +1
Query: 67 NLLSADELFVDGVLLP--QFPSTS------FQPKTNPTHH 162
NL +AD+LFV+GV+LP P+TS P +NP+ H
Sbjct: 38 NLHTADQLFVNGVILPLHLLPTTSKTDPPPQTPTSNPSSH 77
Score = 58.5 bits (140), Expect = 3e-06
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +1
Query: 433 GSPVTRVPPDPNR*LKKSTAPPAHGVIPPMSKARKWPASPRRVGVHLGRSSPIWQVRR 606
G+PVTR K ++AP + SK+RKWP+SP R GVH+GR+SP+WQVRR
Sbjct: 185 GAPVTR---------KVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRNSPVWQVRR 233
>ref|XP_003594150.1| Cytochrome b6 [Medicago truncatula] gi|355483198|gb|AES64401.1|
Cytochrome b6 [Medicago truncatula]
Length = 385
Score = 78.6 bits (192), Expect(4) = 2e-34
Identities = 58/132 (43%), Positives = 66/132 (50%), Gaps = 9/132 (6%)
Frame = +2
Query: 548 VRVGSGS-IWEGAAPFGRFVAKNPKPPSLNHDNSKRETPTSRRCEVXXXXXXXXXXXXXV 724
V VG S +W+ G+ + + S K+E SRR +V V
Sbjct: 220 VHVGRNSPVWQVRRGGGKNSDQQTQQGSNTDKELKKEATVSRRSKVVSGGGGKAK----V 275
Query: 725 LNLNVPPTMCIGYRHQLSCRSDENSAIGVTVSGGSDHTRGSNSG--------HANVGGKL 880
L+LNVP MCIGYRH LSCRSDENSAIG VSGG RG G GG L
Sbjct: 276 LSLNVP--MCIGYRHHLSCRSDENSAIG--VSGGVAVNRGGGDGGGGECHHHDEGSGGNL 331
Query: 881 FYLRNFFTKKSI 916
F LRN FTKKSI
Sbjct: 332 FNLRNLFTKKSI 343
Score = 68.9 bits (167), Expect(4) = 2e-34
Identities = 50/113 (44%), Positives = 55/113 (48%), Gaps = 5/113 (4%)
Frame = +3
Query: 201 ITVTDSATSTASNSKRWIDIFRKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXX 380
IT + S+ ST S SKRW DIFRK
Sbjct: 98 ITESSSSASTFSGSKRWKDIFRKGEKNNTEDKEKEKEKEKEKKNKDKKKERKN----GNG 153
Query: 381 XXXXXELNINIRPFSRSRFAGNSGTTRPK-----SLTQKVNSAPCSRSNSADE 524
ELNINI PFSRSR AGN+ TTRPK +T+KVNSAPCSRSNSA E
Sbjct: 154 ANSAAELNINIWPFSRSRSAGNT-TTRPKFFTGAPVTRKVNSAPCSRSNSAGE 205
Score = 36.2 bits (82), Expect(4) = 2e-34
Identities = 13/15 (86%), Positives = 15/15 (100%)
Frame = +2
Query: 2 CSSPEFEFWMVRNPS 46
C+SPEFEFWM+RNPS
Sbjct: 19 CNSPEFEFWMLRNPS 33
Score = 30.4 bits (67), Expect(4) = 2e-34
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 8/40 (20%)
Frame = +1
Query: 67 NLLSADELFVDGVLLP--QFPSTS------FQPKTNPTHH 162
NL +AD+LFV+GV+LP P+TS P +NP+ H
Sbjct: 38 NLHTADQLFVNGVILPLHLLPTTSKTDPPPQTPTSNPSSH 77
Score = 58.5 bits (140), Expect = 3e-06
Identities = 29/58 (50%), Positives = 38/58 (65%)
Frame = +1
Query: 433 GSPVTRVPPDPNR*LKKSTAPPAHGVIPPMSKARKWPASPRRVGVHLGRSSPIWQVRR 606
G+PVTR K ++AP + SK+RKWP+SP R GVH+GR+SP+WQVRR
Sbjct: 185 GAPVTR---------KVNSAPCSRSNSAGESKSRKWPSSPGRAGVHVGRNSPVWQVRR 233
>ref|XP_002518417.1| conserved hypothetical protein [Ricinus communis]
gi|223542262|gb|EEF43804.1| conserved hypothetical
protein [Ricinus communis]
Length = 358
Score = 63.2 bits (152), Expect(2) = 2e-18
Identities = 43/83 (51%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Frame = +3
Query: 396 ELNINIRPFSRSRFAGNSGT--TRPKSLTQKVNSAPCSRSNSADE*GKEMAR*SASGRGP 569
ELNINI PFSRSR AGNSG T T+KV+SAPCSRSNSA E K S+ GR
Sbjct: 157 ELNINIWPFSRSRSAGNSGARPTMFPGTTRKVSSAPCSRSNSAGE-SKSRKWPSSPGRAH 215
Query: 570 FGKEQP------HLAGSSQKTQN 620
G+ P GS KT N
Sbjct: 216 LGRSSPVWQARRGSGGSRTKTSN 238
Score = 56.6 bits (135), Expect(2) = 2e-18
Identities = 35/81 (43%), Positives = 42/81 (51%), Gaps = 18/81 (22%)
Frame = +2
Query: 722 VLNLNVPPTMCIGYRHQLSCRSDENSAIGV------------------TVSGGSDHTRGS 847
V+NLNVP MC+ YR LSCRSDENSA G+ T+ S+ +
Sbjct: 278 VVNLNVP--MCMAYRQHLSCRSDENSATGISNTTSTSITITATAIAEATIVDSSNSISST 335
Query: 848 NSGHANVGGKLFYLRNFFTKK 910
S A GG LF LR+ FTKK
Sbjct: 336 ASNLATGGGNLFNLRSLFTKK 356
>ref|XP_003576041.1| PREDICTED: uncharacterized protein LOC100844603 [Brachypodium
distachyon]
Length = 303
Score = 54.3 bits (129), Expect(3) = 1e-16
Identities = 29/50 (58%), Positives = 38/50 (76%), Gaps = 3/50 (6%)
Frame = +3
Query: 396 ELNINIRPFSRSRFAGNSGTT--RPKSLTQKVNSAPCSRSNS-ADE*GKE 536
ELNINI PFSRSR AG G++ +P++ +K++SAPCSRSNS D G+E
Sbjct: 136 ELNINIWPFSRSRSAGGGGSSNSKPRAAPRKISSAPCSRSNSRGDTVGRE 185
Score = 41.6 bits (96), Expect(3) = 1e-16
Identities = 18/36 (50%), Positives = 24/36 (66%), Gaps = 2/36 (5%)
Frame = +1
Query: 514 PPMSKARKWPASPRRVG--VHLGRSSPIWQVRRKKP 615
P + R+W ASP R G V +GRSSP+WQ++R P
Sbjct: 188 PSIQHPRRWAASPGRAGGGVPVGRSSPVWQIKRTAP 223
Score = 37.4 bits (85), Expect(3) = 1e-16
Identities = 20/60 (33%), Positives = 28/60 (46%)
Frame = +2
Query: 731 LNVPPTMCIGYRHQLSCRSDENSAIGVTVSGGSDHTRGSNSGHANVGGKLFYLRNFFTKK 910
+N+ CIGYRHQ+SCR + G G + G LF ++ FF+KK
Sbjct: 257 INLSVNSCIGYRHQVSCRRAD---------------AGVTGGRSTGDGGLFGIKGFFSKK 301
>ref|NP_567650.2| uncharacterized protein [Arabidopsis thaliana]
gi|20466282|gb|AAM20458.1| unknown protein [Arabidopsis
thaliana] gi|22136352|gb|AAM91254.1| unknown protein
[Arabidopsis thaliana] gi|332659170|gb|AEE84570.1|
uncharacterized protein [Arabidopsis thaliana]
Length = 387
Score = 58.9 bits (141), Expect(2) = 2e-16
Identities = 44/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)
Frame = +2
Query: 536 NGPLVRVGSGSIWEGAAPFGRFVAKNPKPPSLNHDNSKRETPTSRRCEVXXXXXXXXXXX 715
N P+ +V G G AP G+ + P + KRE P +R+ +
Sbjct: 277 NSPVWQVRRG----GGAPVGKTI-----PEPMGRVVGKREIPETRKGKTVIESNKAK--- 324
Query: 716 XXVLNLNVPPTMCIGYRHQLSCRSDENSAIG-VTVSGGSDHTRGSNSGHANVGGKLFYLR 892
VLNLNVP MCIGYR +LSCR++E+S G + +++ +N+ + N G LF R
Sbjct: 325 --VLNLNVP--MCIGYRSRLSCRTEESSGGGNSNIGSDNNNNNNANANNPNPNG-LFGFR 379
Query: 893 NFFTKK 910
N F KK
Sbjct: 380 NLFIKK 385
Score = 54.3 bits (129), Expect(2) = 2e-16
Identities = 42/106 (39%), Positives = 47/106 (44%), Gaps = 5/106 (4%)
Frame = +3
Query: 222 TSTASNSKRWIDIFRKSTXXXXXXXXXXXXXXXXXXXXXXXXXXXXVXXXXXXXXXXXEL 401
T + SKRW DIFRKS EL
Sbjct: 161 TRETTVSKRWRDIFRKSETKPPGKKEKVKENKKEKKKTGSGPSSGS--------GSGAEL 212
Query: 402 NINIRPFSRSRFAGNSGTTRPK-----SLTQKVNSAPCSRSNSADE 524
NINI PFSRSR AGN+ TRP+ T+KV+SAPCSRSNS E
Sbjct: 213 NINIWPFSRSRSAGNN-VTRPRMSFGAPTTRKVSSAPCSRSNSTGE 257
Score = 58.5 bits (140), Expect = 3e-06
Identities = 30/58 (51%), Positives = 37/58 (63%)
Frame = +1
Query: 433 GSPVTRVPPDPNR*LKKSTAPPAHGVIPPMSKARKWPASPRRVGVHLGRSSPIWQVRR 606
G+P TR K S+AP + SK+RKWP+SP R GVHLGR+SP+WQVRR
Sbjct: 237 GAPTTR---------KVSSAPCSRSNSTGESKSRKWPSSPSRNGVHLGRNSPVWQVRR 285