BLASTX nr result

ID: Glycyrrhiza23_contig00013314 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013314
         (2082 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleop...   654   0.0  
ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleop...   648   0.0  
gb|ACU24489.1| unknown [Glycine max]                                  623   e-176
ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi...   606   e-171
ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|2...   545   e-152

>ref|XP_003554781.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
            max]
          Length = 483

 Score =  654 bits (1688), Expect = 0.0
 Identities = 340/454 (74%), Positives = 353/454 (77%)
 Frame = +3

Query: 192  MSEGAEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAG 371
            MSEGAEIDERVDL                                            +AG
Sbjct: 1    MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGVEEENAEGSFEEDEYEDSAAEAG 60

Query: 372  RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXXLLALPPHGSEVFIGGLPRDACED 551
             KDQLPEAEKS+IATEF + E K S I          LLALPPHGSEVFIGGLPRD CED
Sbjct: 61   GKDQLPEAEKSDIATEFGDDEQKLSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCED 120

Query: 552  DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 731
            DLRELC+PMGDILEVRLMKDRDTGE+KGYAFVAFKTKEVAQKAIE+IH+KEFKGKTLRCS
Sbjct: 121  DLRELCEPMGDILEVRLMKDRDTGENKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRCS 180

Query: 732  LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 911
            LSETKHRLFIGNVPKTWTED+FRKVVEGVGPGVE IELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181  LSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 912  CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNSASSQVKALYVKNIPENVTTEQLKEL 1091
            CADYSRQKM+++SFKLDGNTPTVTWADPKNSPD+SASSQVKALYVKNIPENVTTEQLKEL
Sbjct: 241  CADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKEL 300

Query: 1092 FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 1271
            FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA
Sbjct: 301  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 360

Query: 1272 EKKPDGGYAXXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXXXXXXQQPMIYGRGPMPA 1451
            +KKPDGGYA                                      QQPMIYGRGPMPA
Sbjct: 361  DKKPDGGYAYNPGLHPNHIPHPAYGN--FSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 418

Query: 1452 GMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 1553
            GMQMVPMVLPDGRIGYVLQQPGVQVPA RPRRID
Sbjct: 419  GMQMVPMVLPDGRIGYVLQQPGVQVPATRPRRID 452


>ref|XP_003521823.1| PREDICTED: heterogeneous nuclear ribonucleoprotein Q-like [Glycine
            max]
          Length = 483

 Score =  648 bits (1671), Expect = 0.0
 Identities = 337/454 (74%), Positives = 350/454 (77%)
 Frame = +3

Query: 192  MSEGAEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAG 371
            MSEGAEIDERVDL                                            +AG
Sbjct: 1    MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60

Query: 372  RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXXLLALPPHGSEVFIGGLPRDACED 551
             KDQLPEAEKS+IATEF + E K S I          LLALPPHGSEVFIGGLPRD CED
Sbjct: 61   GKDQLPEAEKSDIATEFGDDEQKLSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCED 120

Query: 552  DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 731
            DLRELC+PMGDILEVRLMKDRDTGE KGYAFVAFKTKEVAQKAIE+IH+KEFKGKTLRCS
Sbjct: 121  DLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKTKEVAQKAIEEIHSKEFKGKTLRCS 180

Query: 732  LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 911
            LSETKHRLFIGNVPKTWTED+FRKVVEGVGPGVE IELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181  LSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 912  CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNSASSQVKALYVKNIPENVTTEQLKEL 1091
            CADYSRQKM+++SFKLDGNTPTVTWADPKNSPD+SASSQVKALYVKNIPENVTTEQLKEL
Sbjct: 241  CADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKEL 300

Query: 1092 FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 1271
            FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA
Sbjct: 301  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 360

Query: 1272 EKKPDGGYAXXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXXXXXXQQPMIYGRGPMPA 1451
            +KKPDGGYA                                      QQPMIYGRGPMPA
Sbjct: 361  DKKPDGGYAYNPGLHPNHVPHPAYGN--FSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 418

Query: 1452 GMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 1553
            GMQMVPM+LPDGRIGYVLQQPGVQVP  RPRR D
Sbjct: 419  GMQMVPMMLPDGRIGYVLQQPGVQVPPARPRRND 452


>gb|ACU24489.1| unknown [Glycine max]
          Length = 439

 Score =  623 bits (1607), Expect = e-176
 Identities = 324/441 (73%), Positives = 337/441 (76%)
 Frame = +3

Query: 192  MSEGAEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAG 371
            MSEGAEIDERVDL                                            +AG
Sbjct: 1    MSEGAEIDERVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEDSAAEAG 60

Query: 372  RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXXLLALPPHGSEVFIGGLPRDACED 551
             KDQLPEAEKS+IATEF + E K S I          LLALPPHGSEVFIGGLPRD CED
Sbjct: 61   GKDQLPEAEKSDIATEFGDDEQKLSFIDEDEKEKHDELLALPPHGSEVFIGGLPRDVCED 120

Query: 552  DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 731
            DLRELC+PMGDILEVRLMKDRDTGE KGYAFVAFK KEVAQKAIE+IH+KEFKGKTLRCS
Sbjct: 121  DLRELCEPMGDILEVRLMKDRDTGEHKGYAFVAFKAKEVAQKAIEEIHSKEFKGKTLRCS 180

Query: 732  LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 911
            LSETKHRLFIGNVPKTWTED+FRKVVEGVGPGVE IELIKDPQNPSRNRGFAFVLYYNNA
Sbjct: 181  LSETKHRLFIGNVPKTWTEDDFRKVVEGVGPGVETIELIKDPQNPSRNRGFAFVLYYNNA 240

Query: 912  CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNSASSQVKALYVKNIPENVTTEQLKEL 1091
            CADYSRQKM+++SFKLDGNTPTVTWADPKNSPD+SASSQVKALYVKNIPENVTTEQLKEL
Sbjct: 241  CADYSRQKMASSSFKLDGNTPTVTWADPKNSPDHSASSQVKALYVKNIPENVTTEQLKEL 300

Query: 1092 FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 1271
            FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA
Sbjct: 301  FRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQA 360

Query: 1272 EKKPDGGYAXXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXXXXXXQQPMIYGRGPMPA 1451
            +KKPDGGYA                                      QQPMIYGRGPMPA
Sbjct: 361  DKKPDGGYAYNPGLHPNHVPHPAYGN--FSGNPYGSLGAGYGVAAGYQQPMIYGRGPMPA 418

Query: 1452 GMQMVPMVLPDGRIGYVLQQP 1514
            GMQMVPM+LPDGRIGYVL  P
Sbjct: 419  GMQMVPMMLPDGRIGYVLNNP 439


>ref|XP_003626597.1| RNA-binding protein [Medicago truncatula] gi|355501612|gb|AES82815.1|
            RNA-binding protein [Medicago truncatula]
          Length = 479

 Score =  606 bits (1563), Expect = e-171
 Identities = 314/455 (69%), Positives = 338/455 (74%), Gaps = 1/455 (0%)
 Frame = +3

Query: 192  MSEGAEIDERVDLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAG 371
            MSEGAEID+RVDL                                            +AG
Sbjct: 1    MSEGAEIDDRVDLDEENYMEEMDDDVEEQIDDDGVDGGEDENAEGSVEEHEYEETAAEAG 60

Query: 372  RKDQLPEAEKSEIATEFAEGELKPSLIXXXXXXXXXXLLALPPHGSEVFIGGLPRDACED 551
            +KDQ PE EKS+   E  E ELKP+LI          LL+ PPHGSEVFIGGLPRD  +D
Sbjct: 61   QKDQFPEGEKSDHGAE--EDELKPALIDEEEREKHDELLSRPPHGSEVFIGGLPRDTSDD 118

Query: 552  DLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKTLRCS 731
            D+RELC+PMGDI+E++L+KDR+TGESKGYAFV +KTKEVAQKAI+DIHNKEFKGKTLRC 
Sbjct: 119  DVRELCEPMGDIVEIKLIKDRETGESKGYAFVGYKTKEVAQKAIDDIHNKEFKGKTLRCL 178

Query: 732  LSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLYYNNA 911
            LSETKHRLFIGN+PKTWTEDEFRK VEGVGPGVE+I+LIKDPQN SRNRGFAFVLYYNNA
Sbjct: 179  LSETKHRLFIGNIPKTWTEDEFRKAVEGVGPGVESIDLIKDPQNQSRNRGFAFVLYYNNA 238

Query: 912  CADYSRQKMSNASFKLDGNTPTVTWADPKNSPDNS-ASSQVKALYVKNIPENVTTEQLKE 1088
            CAD+SRQKMS+  FKLDG TPTVTWADPK SPD S A+SQVKALYVKNIPENVTTEQLKE
Sbjct: 239  CADFSRQKMSSVGFKLDGITPTVTWADPKTSPDQSAAASQVKALYVKNIPENVTTEQLKE 298

Query: 1089 LFRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVVLAKPQ 1268
            LFRRHGEVTKVVMPPGKA GKRDFGFIHYAERSSALKAVK+TEKYEIDGQ LEVV+AKPQ
Sbjct: 299  LFRRHGEVTKVVMPPGKASGKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVIAKPQ 358

Query: 1269 AEKKPDGGYAXXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXXXXXXQQPMIYGRGPMP 1448
            AEKKPDGGYA                                      QQPMIYGRGPMP
Sbjct: 359  AEKKPDGGYAYNPGLHPNHLPHPGYGNFSGNLYGSVGAGYGVAAAAAYQQPMIYGRGPMP 418

Query: 1449 AGMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 1553
            AGMQMVPMVLPDGRIGYVLQQPGVQVP PRPRR D
Sbjct: 419  AGMQMVPMVLPDGRIGYVLQQPGVQVPGPRPRRND 453


>ref|XP_002320894.1| predicted protein [Populus trichocarpa] gi|222861667|gb|EEE99209.1|
            predicted protein [Populus trichocarpa]
          Length = 480

 Score =  545 bits (1403), Expect = e-152
 Identities = 276/400 (69%), Positives = 319/400 (79%), Gaps = 3/400 (0%)
 Frame = +3

Query: 363  DAGRKDQLPEAEKSEIATEFAEGELKPSL-IXXXXXXXXXXLLALPPHGSEVFIGGLPRD 539
            +  +KDQ PEA++    TE AE E KP+  +          LLALPPHGSEVFIGGLPRD
Sbjct: 57   EGSQKDQSPEADRIVADTEPAEDEQKPTASVNEEEKEKHAQLLALPPHGSEVFIGGLPRD 116

Query: 540  ACEDDLRELCDPMGDILEVRLMKDRDTGESKGYAFVAFKTKEVAQKAIEDIHNKEFKGKT 719
              ED+LR+LC+P+G+I E+RLMKD+D+GESKG+AFVAFK+KEVA+KAIE++H+K++KGKT
Sbjct: 117  VIEDELRDLCEPIGEIFEIRLMKDKDSGESKGFAFVAFKSKEVARKAIEELHSKDYKGKT 176

Query: 720  LRCSLSETKHRLFIGNVPKTWTEDEFRKVVEGVGPGVENIELIKDPQNPSRNRGFAFVLY 899
            LRCS+SETK+RLFIGNVPK  TEDEFRK++E VGPGVE IELIKDPQ P+RNRGFAF+LY
Sbjct: 177  LRCSISETKNRLFIGNVPKNLTEDEFRKIIEEVGPGVEVIELIKDPQTPTRNRGFAFILY 236

Query: 900  YNNACADYSRQKMSNASFKLDGNTPTVTWADPKNSP--DNSASSQVKALYVKNIPENVTT 1073
            YNNACADYSRQKM NA+FKLDG+TPTV+WADPK +P   ++ASSQVKALYVKNIPEN +T
Sbjct: 237  YNNACADYSRQKMLNANFKLDGHTPTVSWADPKGTPPDHSAASSQVKALYVKNIPENTST 296

Query: 1074 EQLKELFRRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKDTEKYEIDGQMLEVV 1253
            EQLK LF+RHG+VTKVVMPPGKA GKRDFGFIHYAERSSALKAV+D EKYEIDGQ+LEVV
Sbjct: 297  EQLKGLFQRHGDVTKVVMPPGKA-GKRDFGFIHYAERSSALKAVRDAEKYEIDGQVLEVV 355

Query: 1254 LAKPQAEKKPDGGYAXXXXXXXXXXXXXXXXXSFXXXXXXXXXXXXXXXXXXXQQPMIYG 1433
            LAKPQA+KKPD  Y                  S                    QQP+IYG
Sbjct: 356  LAKPQADKKPDAAY--PYNAGVHPNPVPLPAYSGFAGNPYGSLGTGFGVASSFQQPVIYG 413

Query: 1434 RGPMPAGMQMVPMVLPDGRIGYVLQQPGVQVPAPRPRRID 1553
            RGPMPAGM MVPMVLPDGRIGYVLQQPGVQ+P PRPRR+D
Sbjct: 414  RGPMPAGMHMVPMVLPDGRIGYVLQQPGVQMPQPRPRRVD 453


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