BLASTX nr result

ID: Glycyrrhiza23_contig00013289 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013289
         (339 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Gl...   130   1e-28
ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Gl...   129   3e-28
ref|XP_003591894.1| Auxin response factor [Medicago truncatula] ...   108   3e-22
ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|2...    75   7e-12
emb|CBI31453.3| unnamed protein product [Vitis vinifera]               74   9e-12

>ref|XP_003535530.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 608

 Score =  130 bits (326), Expect = 1e-28
 Identities = 71/111 (63%), Positives = 87/111 (78%), Gaps = 4/111 (3%)
 Frame = -2

Query: 338 QGARHAQFGLTPSDFPFN----NMILGGLSRLEHHHHAAQSVRPPFGTYNRSSSSTNKTN 171
           QGARHAQFGL+PSDFPFN    +M+LGG SRL+  H AAQ +RPP GTY   +++T K N
Sbjct: 444 QGARHAQFGLSPSDFPFNKLPADMLLGGFSRLD--HAAAQPIRPPCGTY--KNNTTTKAN 499

Query: 170 VDLSCLLTVGNPGQSFIKESNEAKAPHNHILLFGKLIHTEQQKSSSNCSGS 18
           V +SCLLTVGNPGQ+F KESNE KAP  HILLFGKLI TEQ+ S+++ + +
Sbjct: 500 VGISCLLTVGNPGQNF-KESNETKAP--HILLFGKLIQTEQKSSNTSSANT 547


>ref|XP_003555436.1| PREDICTED: auxin response factor 18-like [Glycine max]
          Length = 589

 Score =  129 bits (323), Expect = 3e-28
 Identities = 71/113 (62%), Positives = 86/113 (76%), Gaps = 4/113 (3%)
 Frame = -2

Query: 338 QGARHAQFGLTPSDFPFN----NMILGGLSRLEHHHHAAQSVRPPFGTYNRSSSSTNKTN 171
           QGARH QFGL+PSDFPFN    +M+LGG SRL+H   AAQ + P  GT+   +++T K N
Sbjct: 441 QGARHPQFGLSPSDFPFNKLPADMLLGGFSRLDHA--AAQPIMPHCGTFK--NNTTTKAN 496

Query: 170 VDLSCLLTVGNPGQSFIKESNEAKAPHNHILLFGKLIHTEQQKSSSNCSGSVS 12
           VD+SCLLTVGNPGQ+F KESNE KAP  HILLFGKLIHTEQ+ S++  S S +
Sbjct: 497 VDISCLLTVGNPGQNF-KESNETKAP--HILLFGKLIHTEQKSSNTTSSASTN 546


>ref|XP_003591894.1| Auxin response factor [Medicago truncatula]
           gi|355480942|gb|AES62145.1| Auxin response factor
           [Medicago truncatula]
          Length = 619

 Score =  108 bits (271), Expect = 3e-22
 Identities = 68/121 (56%), Positives = 80/121 (66%), Gaps = 12/121 (9%)
 Frame = -2

Query: 338 QGARHAQFGLT---PSDF-PFN-----NMILGGLSRLEHHHHAAQSVRPPFGTYNRSSSS 186
           QGARHAQFG     PSD  PFN     +M LG LS L   +      RPP+G Y   +++
Sbjct: 451 QGARHAQFGPNYNNPSDLIPFNKLLQQDMFLGNLS-LSRFNQQQPITRPPYGPYKSINNN 509

Query: 185 TN-KTNVDLSCLLTVGNPGQSFIKESNEAKAP--HNHILLFGKLIHTEQQKSSSNCSGSV 15
            N KTNVDLSCLL+VGN GQSF + + EAKAP  HNHILLFGK+IHTEQ  S+ + S SV
Sbjct: 510 NNTKTNVDLSCLLSVGNSGQSFKESNIEAKAPHNHNHILLFGKIIHTEQNSSNISKSDSV 569

Query: 14  S 12
           S
Sbjct: 570 S 570


>ref|XP_002311089.1| predicted protein [Populus trichocarpa] gi|222850909|gb|EEE88456.1|
           predicted protein [Populus trichocarpa]
          Length = 671

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 49/110 (44%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
 Frame = -2

Query: 338 QGARHAQFGLTPSDFPFNNMILGGLS-RLEHHHHAAQSVRPPFGTYNRSSSSTNKTNVDL 162
           QGARHAQF L+ SD  FN +  G      +   HAA   R   G +        K + ++
Sbjct: 434 QGARHAQFELSSSDLHFNKLQSGLFPVDFQRRDHAASPSRISSGNF----MGNTKKSENI 489

Query: 161 SCLLTVGNPGQSFIKESNEAKAPHNHILLFGKLIHTEQQKSSSNCSGSVS 12
           SCLLT+GN  QS +KES+E K P  H +LFG+LI T+QQ SS +CSG  +
Sbjct: 490 SCLLTMGNSSQS-LKESSETKTP--HFVLFGQLIVTDQQ-SSQSCSGDTN 535


>emb|CBI31453.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 50/112 (44%), Positives = 68/112 (60%)
 Frame = -2

Query: 338 QGARHAQFGLTPSDFPFNNMILGGLSRLEHHHHAAQSVRPPFGTYNRSSSSTNKTNVDLS 159
           QGARHAQFGL+ SD  FN + L GL  L       Q+  PP    + ++ S ++ N ++S
Sbjct: 345 QGARHAQFGLSSSDLHFNKLQL-GLFPLGLQQQLDQTA-PPSSILSGNTMSNHENNENIS 402

Query: 158 CLLTVGNPGQSFIKESNEAKAPHNHILLFGKLIHTEQQKSSSNCSGSVSTIT 3
           CLLT+GN  Q+  K++NE KAP  +  LFG+ I  EQQ S S CSG  + I+
Sbjct: 403 CLLTIGNSTQN-SKKNNEIKAP--YFFLFGQPILIEQQVSQS-CSGDTAGIS 450


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