BLASTX nr result
ID: Glycyrrhiza23_contig00013288
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Glycyrrhiza23_contig00013288 (301 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003517769.1| PREDICTED: probable pectate lyase 3-like [Gl... 60 7e-16 ref|XP_003613595.1| Pectate lyase [Medicago truncatula] gi|35551... 60 2e-15 gb|AFK39232.1| unknown [Medicago truncatula] 54 2e-15 ref|XP_003519771.1| PREDICTED: probable pectate lyase 3-like [Gl... 59 5e-15 ref|XP_003530685.1| PREDICTED: probable pectate lyase 3-like [Gl... 46 1e-10 >ref|XP_003517769.1| PREDICTED: probable pectate lyase 3-like [Glycine max] Length = 464 Score = 59.7 bits (143), Expect(2) = 7e-16 Identities = 27/32 (84%), Positives = 29/32 (90%) Frame = +1 Query: 205 SRHDMIKAKPGTYVGRLTRYAGSL*CIVGQPC 300 SR DMI AKPG+YVGRLTRYAGSL CIVG+PC Sbjct: 433 SRQDMITAKPGSYVGRLTRYAGSLRCIVGKPC 464 Score = 48.9 bits (115), Expect(2) = 7e-16 Identities = 21/34 (61%), Positives = 24/34 (70%), Gaps = 7/34 (20%) Frame = +2 Query: 128 EWKNWQWRSINDEYMN-------GPELRDRPLSQ 208 EWKNWQWRSINDEYMN G ++ DRP S+ Sbjct: 401 EWKNWQWRSINDEYMNGAFFREGGSQITDRPFSR 434 >ref|XP_003613595.1| Pectate lyase [Medicago truncatula] gi|355514930|gb|AES96553.1| Pectate lyase [Medicago truncatula] Length = 449 Score = 59.7 bits (143), Expect(2) = 2e-15 Identities = 26/32 (81%), Positives = 30/32 (93%) Frame = +1 Query: 205 SRHDMIKAKPGTYVGRLTRYAGSL*CIVGQPC 300 SR DMIK++PGTYVGRLTRY+GSL CIVG+PC Sbjct: 418 SRKDMIKSRPGTYVGRLTRYSGSLRCIVGKPC 449 Score = 47.4 bits (111), Expect(2) = 2e-15 Identities = 20/33 (60%), Positives = 24/33 (72%), Gaps = 7/33 (21%) Frame = +2 Query: 131 WKNWQWRSINDEYMN-------GPELRDRPLSQ 208 WK+WQWRSIND Y+N GPEL+DRP S+ Sbjct: 387 WKSWQWRSINDVYLNGAFFRQGGPELKDRPFSR 419 >gb|AFK39232.1| unknown [Medicago truncatula] Length = 161 Score = 53.9 bits (128), Expect(2) = 2e-15 Identities = 23/32 (71%), Positives = 29/32 (90%) Frame = +1 Query: 205 SRHDMIKAKPGTYVGRLTRYAGSL*CIVGQPC 300 S+ DMIKAKPG++VGRLTRY+G+L C VG+PC Sbjct: 130 SQKDMIKAKPGSFVGRLTRYSGNLRCRVGEPC 161 Score = 52.8 bits (125), Expect(2) = 2e-15 Identities = 23/34 (67%), Positives = 25/34 (73%), Gaps = 7/34 (20%) Frame = +2 Query: 128 EWKNWQWRSINDEYMN-------GPELRDRPLSQ 208 EWK WQWRSINDEY+N GPEL+DRP SQ Sbjct: 98 EWKTWQWRSINDEYINGAFFVQSGPELKDRPFSQ 131 >ref|XP_003519771.1| PREDICTED: probable pectate lyase 3-like [Glycine max] Length = 444 Score = 59.3 bits (142), Expect(2) = 5e-15 Identities = 25/32 (78%), Positives = 30/32 (93%) Frame = +1 Query: 205 SRHDMIKAKPGTYVGRLTRYAGSL*CIVGQPC 300 SRHDM+ A+PG+YVGRLTRYAGSL C+VG+PC Sbjct: 413 SRHDMMTARPGSYVGRLTRYAGSLKCMVGKPC 444 Score = 46.2 bits (108), Expect(2) = 5e-15 Identities = 20/34 (58%), Positives = 24/34 (70%), Gaps = 7/34 (20%) Frame = +2 Query: 128 EWKNWQWRSINDEYMN-------GPELRDRPLSQ 208 EWK+WQWRSINDEY+N G +L DRP S+ Sbjct: 381 EWKSWQWRSINDEYLNGGFFREGGAQLTDRPYSR 414 >ref|XP_003530685.1| PREDICTED: probable pectate lyase 3-like [Glycine max] Length = 451 Score = 46.2 bits (108), Expect(2) = 1e-10 Identities = 23/33 (69%), Positives = 26/33 (78%), Gaps = 1/33 (3%) Frame = +1 Query: 205 SRHDMIKAKPGTYVGRLTRYAGS-L*CIVGQPC 300 SR DMI AK G YVGRLTRY+G+ L C VG+PC Sbjct: 419 SREDMITAKVGNYVGRLTRYSGNLLKCRVGRPC 451 Score = 44.7 bits (104), Expect(2) = 1e-10 Identities = 20/33 (60%), Positives = 21/33 (63%), Gaps = 7/33 (21%) Frame = +2 Query: 131 WKNWQWRSINDEYMN-------GPELRDRPLSQ 208 W NWQWRSIND YMN GPEL RP S+ Sbjct: 388 WANWQWRSINDVYMNGAFFVQSGPELASRPFSR 420