BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013273
         (475 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK49090.1| unknown [Medicago truncatula]                          158   4e-37
ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago t...   158   4e-37
ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-...   126   2e-27
ref|XP_003523387.1| PREDICTED: RNA polymerase sigma factor rpoD-...   125   5e-27
dbj|BAM05478.1| sigma-like factor 5B [Glycine max]                    124   6e-27

>gb|AFK49090.1| unknown [Medicago truncatula]
          Length = 210

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/116 (69%), Positives = 89/116 (76%)
 Frame = +3

Query: 126 MGVVTVSSSAARTPLGLNTKFSSHHLALKRPLTVAFKGDKQNDTSVVATREKIPMHIEXX 305
           MGVVTVSSSAARTPLGLN KFS+HH  LKRPLTVAFKGDKQNDT++VAT+EKIP  ++  
Sbjct: 1   MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60

Query: 306 XXXXXXXXXXXXLPKRVRVVSTEEISPSSFDVDYNEAAAILENIYKLSPASDTCDA 473
                       LPK+ R V TEE  PSS DVDYNEAAAILENIYKLSP +D CDA
Sbjct: 61  KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDA 116


>ref|XP_003602198.1| RNA polymerase sigma factor rpoD [Medicago truncatula]
           gi|355491246|gb|AES72449.1| RNA polymerase sigma factor
           rpoD [Medicago truncatula]
          Length = 514

 Score =  158 bits (400), Expect = 4e-37
 Identities = 81/116 (69%), Positives = 89/116 (76%)
 Frame = +3

Query: 126 MGVVTVSSSAARTPLGLNTKFSSHHLALKRPLTVAFKGDKQNDTSVVATREKIPMHIEXX 305
           MGVVTVSSSAARTPLGLN KFS+HH  LKRPLTVAFKGDKQNDT++VAT+EKIP  ++  
Sbjct: 1   MGVVTVSSSAARTPLGLNAKFSTHHPVLKRPLTVAFKGDKQNDTALVATQEKIPTQVKPA 60

Query: 306 XXXXXXXXXXXXLPKRVRVVSTEEISPSSFDVDYNEAAAILENIYKLSPASDTCDA 473
                       LPK+ R V TEE  PSS DVDYNEAAAILENIYKLSP +D CDA
Sbjct: 61  KTHKKRIAKTNKLPKKPRAVCTEETFPSSLDVDYNEAAAILENIYKLSPTTDICDA 116


>ref|XP_003541542.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 512

 Score =  126 bits (316), Expect = 2e-27
 Identities = 66/115 (57%), Positives = 80/115 (69%)
 Frame = +3

Query: 126 MGVVTVSSSAARTPLGLNTKFSSHHLALKRPLTVAFKGDKQNDTSVVATREKIPMHIEXX 305
           MGV+TVS+SAARTPL LNT+  SH    KRP+ +AFKG+K N T++V+ +EKIP+ +E  
Sbjct: 1   MGVITVSTSAARTPLRLNTRLISHQQVHKRPIILAFKGNKSNKTTLVSPQEKIPLPLETA 60

Query: 306 XXXXXXXXXXXXLPKRVRVVSTEEISPSSFDVDYNEAAAILENIYKLSPASDTCD 470
                         KRVR VST E SP + DVDYNEAAA LENIYKLSP SDTC+
Sbjct: 61  KKHQKRVGKTSESLKRVRAVSTVETSPCTLDVDYNEAAAKLENIYKLSPVSDTCN 115


>ref|XP_003523387.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Glycine max]
          Length = 509

 Score =  125 bits (313), Expect = 5e-27
 Identities = 73/117 (62%), Positives = 83/117 (70%), Gaps = 1/117 (0%)
 Frame = +3

Query: 126 MGVVTVSSSAARTPLGLNTKFSSHHLALKRPLTVAFKGDKQNDTSVVATREKIPMHIEXX 305
           MGVVTVS SA+RTPLG NTKFS+H L  KRPL VAFKGDK ND+++VAT+EKIP+ +E  
Sbjct: 1   MGVVTVSGSASRTPLGFNTKFSTHRL--KRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 306 XXXXXXXXXXXX-LPKRVRVVSTEEISPSSFDVDYNEAAAILENIYKLSPASDTCDA 473
                        LPKR       E SPSS DVDYNEAAA+LENIYKLSPAS T +A
Sbjct: 59  KKTQKKRIGKSNKLPKR-------ESSPSSMDVDYNEAAAMLENIYKLSPASHTGNA 108


>dbj|BAM05478.1| sigma-like factor 5B [Glycine max]
          Length = 507

 Score =  124 bits (312), Expect = 6e-27
 Identities = 72/116 (62%), Positives = 83/116 (71%), Gaps = 1/116 (0%)
 Frame = +3

Query: 126 MGVVTVSSSAARTPLGLNTKFSSHHLALKRPLTVAFKGDKQNDTSVVATREKIPMHIEXX 305
           MGVVTVSSSAARTPLGLNTKF ++ L  KRPL VAFKGDK ND+++VAT+EKIP+ +E  
Sbjct: 1   MGVVTVSSSAARTPLGLNTKFCNNRL--KRPLIVAFKGDKHNDSALVATQEKIPVPVETA 58

Query: 306 XXXXXXXXXXXX-LPKRVRVVSTEEISPSSFDVDYNEAAAILENIYKLSPASDTCD 470
                        LPKR       E SPSS DVDYNEAAA+LEN+YKLSPASD  +
Sbjct: 59  KKTQKKRIGKTNKLPKR-------ESSPSSMDVDYNEAAAMLENLYKLSPASDNAE 107