BLASTX nr result

ID: Glycyrrhiza23_contig00013271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013271
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39204.1| unknown [Lotus japonicus]                              169   6e-40
ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated p...   157   2e-36
ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792...   151   1e-34
ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|2...   150   4e-34
ref|XP_004137364.1| PREDICTED: uncharacterized protein LOC101206...   148   2e-33

>gb|AFK39204.1| unknown [Lotus japonicus]
          Length = 111

 Score =  169 bits (428), Expect = 6e-40
 Identities = 83/110 (75%), Positives = 87/110 (79%)
 Frame = +1

Query: 100 EQEAEQPVPLXXXXXXXXXXXXXXXKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDA 279
           EQEAEQP+P+               KLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDA
Sbjct: 2   EQEAEQPIPVQVGTSDSSSRVSRVRKLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDA 61

Query: 280 VEYRSTRRSSPSPMEQRCLGLILIPSSCRTSCHVDCSVDEQXXXXXXTET 429
           VEYRSTRRSSPSPMEQRCLGLILIPSSCR +CHVDCS+DEQ       ET
Sbjct: 62  VEYRSTRRSSPSPMEQRCLGLILIPSSCRATCHVDCSIDEQLSLLSLRET 111


>ref|XP_003593896.1| Small nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|357447245|ref|XP_003593898.1| Small
           nuclear ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482944|gb|AES64147.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|355482946|gb|AES64149.1| Small nuclear
           ribonucleoprotein-associated protein B [Medicago
           truncatula] gi|388515765|gb|AFK45944.1| unknown
           [Medicago truncatula]
          Length = 113

 Score =  157 bits (397), Expect = 2e-36
 Identities = 79/103 (76%), Positives = 83/103 (80%), Gaps = 2/103 (1%)
 Frame = +1

Query: 100 EQEAEQPVPLXXXXXXXXXXXXXXX--KLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQ 273
           EQEAEQPVP+                 KLLFR+MLVGIKDGRFFLG FYC+DKQGNIILQ
Sbjct: 2   EQEAEQPVPVQGGSSDSLESDRVSRVRKLLFRQMLVGIKDGRFFLGNFYCMDKQGNIILQ 61

Query: 274 DAVEYRSTRRSSPSPMEQRCLGLILIPSSCRTSCHVDCSVDEQ 402
           D VEYRSTRRSSPSPMEQRC+GLILIPSSCR SCHVDCSVDEQ
Sbjct: 62  DTVEYRSTRRSSPSPMEQRCIGLILIPSSCRMSCHVDCSVDEQ 104


>ref|XP_003542940.1| PREDICTED: uncharacterized protein LOC100792908 [Glycine max]
          Length = 107

 Score =  151 bits (382), Expect = 1e-34
 Identities = 72/85 (84%), Positives = 76/85 (89%)
 Frame = +1

Query: 175 KLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPSPMEQRCLGLILIP 354
           KLLFRRMLVGIKDGRFFLG FYCIDKQGNIILQDAVEYRSTR+SSPSPMEQRCLGLILIP
Sbjct: 20  KLLFRRMLVGIKDGRFFLGSFYCIDKQGNIILQDAVEYRSTRQSSPSPMEQRCLGLILIP 79

Query: 355 SSCRTSCHVDCSVDEQXXXXXXTET 429
           SSCRTSCHVDC++ EQ       +T
Sbjct: 80  SSCRTSCHVDCAIHEQLSLLSLNQT 104


>ref|XP_002322446.1| predicted protein [Populus trichocarpa] gi|222869442|gb|EEF06573.1|
           predicted protein [Populus trichocarpa]
          Length = 109

 Score =  150 bits (378), Expect = 4e-34
 Identities = 70/76 (92%), Positives = 74/76 (97%)
 Frame = +1

Query: 175 KLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPSPMEQRCLGLILIP 354
           KLLFRRMLVGIKDGRFFLG F+CIDKQGNIILQDAVEYR+T RSSPSPMEQRCLGLILIP
Sbjct: 27  KLLFRRMLVGIKDGRFFLGSFHCIDKQGNIILQDAVEYRNTHRSSPSPMEQRCLGLILIP 86

Query: 355 SSCRTSCHVDCSVDEQ 402
           SSCRTSCHVDCS++EQ
Sbjct: 87  SSCRTSCHVDCSIEEQ 102


>ref|XP_004137364.1| PREDICTED: uncharacterized protein LOC101206200 [Cucumis sativus]
           gi|449523864|ref|XP_004168943.1| PREDICTED:
           uncharacterized protein LOC101229488 [Cucumis sativus]
          Length = 112

 Score =  148 bits (373), Expect = 2e-33
 Identities = 69/76 (90%), Positives = 73/76 (96%)
 Frame = +1

Query: 175 KLLFRRMLVGIKDGRFFLGGFYCIDKQGNIILQDAVEYRSTRRSSPSPMEQRCLGLILIP 354
           KLLFRRML+GIKDGRFFLG FYCIDKQGNIILQDAVEYRSTRRSSPSPMEQRCLGLILIP
Sbjct: 31  KLLFRRMLIGIKDGRFFLGNFYCIDKQGNIILQDAVEYRSTRRSSPSPMEQRCLGLILIP 90

Query: 355 SSCRTSCHVDCSVDEQ 402
           +SCR SCHVD ++DEQ
Sbjct: 91  NSCRVSCHVDSTIDEQ 106


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