BLASTX nr result

ID: Glycyrrhiza23_contig00013249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013249
         (1745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK36624.1| unknown [Medicago truncatula]                          332   2e-88
ref|XP_003529308.1| PREDICTED: uncharacterized protein LOC100818...   329   2e-87
ref|XP_003542768.1| PREDICTED: uncharacterized protein LOC100791...   325   3e-86
ref|NP_001236615.1| Dof6 transcription factor [Glycine max] gi|1...   270   9e-70
ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-li...   258   3e-66

>gb|AFK36624.1| unknown [Medicago truncatula]
          Length = 298

 Score =  332 bits (850), Expect = 2e-88
 Identities = 188/309 (60%), Positives = 209/309 (67%), Gaps = 16/309 (5%)
 Frame = -1

Query: 1277 MGLSSKQVCSSSGLDWKQTLLEAQNLEFPKPHNLMRKXXXXXXXXXXXXSESLKCPRCDS 1098
            MGLSSKQV SSSGLDWKQTLLE+Q+LE PKPH+LMRK             E L CPRCDS
Sbjct: 1    MGLSSKQVISSSGLDWKQTLLESQDLELPKPHHLMRKQQQQQSQQQA---EHLNCPRCDS 57

Query: 1097 TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKKXXXXXXXXXXX 918
            TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKR KK           
Sbjct: 58   TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRIKKPTTPVTSSTTI 117

Query: 917  XXXXXXXXXTNINMDGVLSHMTIQTPL---DQKSLPSSLYQALINPPSLLLQQNLMSSTN 747
                     +  NM+   S+M IQTPL   D KS+PSSLYQALI+PPSLLLQQN+M++ +
Sbjct: 118  TTTSTTCTTSITNMN---SNMAIQTPLQVGDHKSIPSSLYQALIHPPSLLLQQNMMNNLS 174

Query: 746  RDLESKDFGIGS-----NGNGMFNIGSTTLPIP-QXXXXXXXXXXXXXXXXXXXXXSNVY 585
               E+KDFGIG+     N NGMF   S+TL +P Q                     SNVY
Sbjct: 175  ---ENKDFGIGNGNGNVNVNGMFTSTSSTLHLPHQNQTMLFPFSTSSSFDTTTCSSSNVY 231

Query: 584  YYGEDQFKAMEEPTI------NTKPWEIPAATSGGNMGTSNYNWNWEDIDSLVSTDLKDP 423
            YYGED FK +EEP I      N KPWEIPAA++ G M +S Y WNWEDIDSLVSTDLK+P
Sbjct: 232  YYGED-FKTIEEPIIPSTGCTNAKPWEIPAASTSGGMESSKY-WNWEDIDSLVSTDLKNP 289

Query: 422  -WDDSDIKP 399
             WDDSDIKP
Sbjct: 290  YWDDSDIKP 298


>ref|XP_003529308.1| PREDICTED: uncharacterized protein LOC100818111 [Glycine max]
          Length = 332

 Score =  329 bits (843), Expect = 2e-87
 Identities = 196/337 (58%), Positives = 208/337 (61%), Gaps = 44/337 (13%)
 Frame = -1

Query: 1277 MGLSSKQVCSSSGLDWKQTLLEAQNLEFPKPHNLMRKXXXXXXXXXXXXS---ESLKCPR 1107
            MGLSSKQV SSSGLDWKQTLLEAQNLE PKP NLMRK                ESLKCPR
Sbjct: 1    MGLSSKQV-SSSGLDWKQTLLEAQNLELPKP-NLMRKQQQQQQQQQQQTQPNSESLKCPR 58

Query: 1106 CDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKK-------- 951
            CDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKR KK        
Sbjct: 59   CDSTNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVKKSITPITTS 118

Query: 950  -XXXXXXXXXXXXXXXXXXXXTNINMDGVL---SHMTIQTPL--DQKSLPSSLYQALINP 789
                                    NMD +L   SHMTIQTPL  DQK++ SSLYQALI P
Sbjct: 119  STTTTPITTATSTCTATVTTSIGNNMDAMLGCYSHMTIQTPLADDQKNMSSSLYQALIRP 178

Query: 788  PSLLLQQNLMSSTNRDLESKDFGIGSNGNGMFNIGSTTLP--------IPQXXXXXXXXX 633
            P LLLQQNL+++  R+LE KDFGIG   NG+F   +  LP         P          
Sbjct: 179  PPLLLQQNLLNT--RELEGKDFGIGIGNNGIFPSSTLALPTHQSQSLLFPFSASSRSFDT 236

Query: 632  XXXXXXXXXXXXSNVYYYGEDQFKAMEEPTINT----------------KPWEIPAATSG 501
                        SNVY YGEDQFKA+EEPTIN+                 PWEI AATSG
Sbjct: 237  NPCSVVSTSLRSSNVYNYGEDQFKAIEEPTINSTTATIVPSTGGTNNTHHPWEIAAATSG 296

Query: 500  GNMGT---SNYNWNWEDIDSLVSTDLKDPWDDSDIKP 399
              +GT   SNY WNWED DSLVSTDLKDPWDDSDIKP
Sbjct: 297  VGLGTSSNSNY-WNWEDFDSLVSTDLKDPWDDSDIKP 332


>ref|XP_003542768.1| PREDICTED: uncharacterized protein LOC100791855 [Glycine max]
          Length = 336

 Score =  325 bits (832), Expect = 3e-86
 Identities = 196/341 (57%), Positives = 207/341 (60%), Gaps = 48/341 (14%)
 Frame = -1

Query: 1277 MGLSSKQVCSSSGLDWKQTLLEAQNLEFPKPHNLMRKXXXXXXXXXXXXSESLKCPRCDS 1098
            MGLSSKQV SSSGLDWKQTLLEAQNLE PKP NLMRK            SESLKCPRCDS
Sbjct: 1    MGLSSKQV-SSSGLDWKQTLLEAQNLELPKP-NLMRKQQQQQQQQTQPNSESLKCPRCDS 58

Query: 1097 TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKK----------- 951
            TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKR +K           
Sbjct: 59   TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRVRKSITTPITTSST 118

Query: 950  -XXXXXXXXXXXXXXXXXXXXTNINMDGVL---SHMTIQTPL--DQKSLPSSLYQALINP 789
                                  N NMD +L   SHMTIQTPL  D K++ SSLYQALI P
Sbjct: 119  TTSITTTTSTCTATVTTSIGNNNNNMDAMLGCNSHMTIQTPLADDHKNMSSSLYQALIRP 178

Query: 788  PSLLLQQNLMSSTNRDLESKDF--GIGSNGNGMFNIGSTTLP-----------IPQXXXX 648
            P LLLQQ  + +  RDLE KDF  GIG+  NG+F   S TLP            P     
Sbjct: 179  PPLLLQQQNLMNNTRDLEGKDFGIGIGNGNNGIF--PSLTLPFPIHHQSQSLLFPFSTSS 236

Query: 647  XXXXXXXXXXXXXXXXXSNVYYYGEDQFKAMEEPTINT---------------KPWEIPA 513
                             SNVY YGEDQFKA+EEPTIN+                PWEI A
Sbjct: 237  SSFDTNPCSVVSTSLRSSNVYNYGEDQFKAIEEPTINSTITTTTIVPSTNNTHHPWEIAA 296

Query: 512  ATSGGNMGT---SNYNWNWEDIDSLVSTDLKDPWDDSDIKP 399
            ATSG  +GT   SNY WNWED DSLVSTDLKDPWD SDIKP
Sbjct: 297  ATSGVGLGTSSNSNY-WNWEDFDSLVSTDLKDPWDGSDIKP 336


>ref|NP_001236615.1| Dof6 transcription factor [Glycine max] gi|146674816|gb|ABQ42347.1|
            Dof6 transcription factor [Glycine max]
          Length = 291

 Score =  270 bits (690), Expect = 9e-70
 Identities = 170/314 (54%), Positives = 186/314 (59%), Gaps = 21/314 (6%)
 Frame = -1

Query: 1277 MGLSSKQVCSSSGLDWKQTLLEAQNLEFPKPHNLMRKXXXXXXXXXXXXSESLKCPRCDS 1098
            MGLSSKQV S+ GLDW QTLLEAQNLE PKP  + ++             E LKCPRCDS
Sbjct: 1    MGLSSKQV-SNRGLDWNQTLLEAQNLELPKPPPMRKQQQQTQPS------EPLKCPRCDS 53

Query: 1097 TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKKXXXXXXXXXXX 918
             NTKFCYYNNYNKSQPRH+CRACKRHWTKGGTLRNVPVGGGRKNKR KK           
Sbjct: 54   INTKFCYYNNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGGRKNKRVKK-STTPNTATAT 112

Query: 917  XXXXXXXXXTNINMDGVLSHMTIQTPL----DQKSLPSSLYQALINPPSLLLQQNLMSST 750
                     +N NMDG L +  I  PL    D K+ PSSLYQ+L  P     QQNLM ST
Sbjct: 113  NSISTTTTTSNTNMDGEL-NTPITIPLFAVDDHKTTPSSLYQSLCLP-----QQNLMVST 166

Query: 749  NRDLESKDFGIGSNGNGMFNIGSTTLPIPQ------XXXXXXXXXXXXXXXXXXXXXSNV 588
                E KDFGI   GNG+F   S+T+P PQ                           S+V
Sbjct: 167  KDSEEGKDFGI---GNGIFL--SSTVPFPQSQSLLFPFTTSNSFDTNQCAISSSLRSSSV 221

Query: 587  YYYGEDQFKAMEEPTI-----------NTKPWEIPAATSGGNMGTSNYNWNWEDIDSLVS 441
            Y YGE +FK  EEPTI           NT+PWEI A +SG  M  SNY W WEDIDSLVS
Sbjct: 222  YNYGE-EFKITEEPTINSIMPNASGGTNTQPWEIAATSSGLEM--SNY-WTWEDIDSLVS 277

Query: 440  TDLKDPWDDSDIKP 399
            TDL  PWDDSDIKP
Sbjct: 278  TDLNVPWDDSDIKP 291


>ref|XP_003545886.1| PREDICTED: dof zinc finger protein DOF5.3-like [Glycine max]
          Length = 285

 Score =  258 bits (660), Expect = 3e-66
 Identities = 162/313 (51%), Positives = 184/313 (58%), Gaps = 20/313 (6%)
 Frame = -1

Query: 1277 MGLSSKQVCSSSGLDWKQTLLEAQNLEFPKPHNLMRKXXXXXXXXXXXXSESLKCPRCDS 1098
            MGLSSKQV S+ GLDW QTLL+AQNLE P P  + ++             E LKCPRCDS
Sbjct: 1    MGLSSKQV-SNRGLDWNQTLLQAQNLELPNPPPMRKQQQTQPS-------EPLKCPRCDS 52

Query: 1097 TNTKFCYYNNYNKSQPRHFCRACKRHWTKGGTLRNVPVGGGRKNKRAKKXXXXXXXXXXX 918
             NTKFCYYNNYNKSQPRH+CRACKRHWTKGGTLRNVPVGGGRKNKR KK           
Sbjct: 53   INTKFCYYNNYNKSQPRHYCRACKRHWTKGGTLRNVPVGGGRKNKRVKK-----STTPAI 107

Query: 917  XXXXXXXXXTNINMDGVLSHMTIQTPL---DQKSLPSSLYQALINPPSLLLQQNLMSSTN 747
                     +N NMDG L++      L   D K+ PSSLYQ +  P     QQNLMS+ +
Sbjct: 108  ATTSISTSTSNANMDGELNNPITIPSLAVDDHKTTPSSLYQYVCLP-----QQNLMSTKD 162

Query: 746  RDLESKDFGIGSNGNGMFNIGSTTLPIPQ------XXXXXXXXXXXXXXXXXXXXXSNVY 585
             + E KDFGI   GNG+F   S+T+P PQ                           S+VY
Sbjct: 163  SE-EGKDFGI---GNGIFL--SSTVPFPQSQSLLFPFTTSNSFDPNLCAISSSFRSSSVY 216

Query: 584  YYGEDQFKAMEEPTI-----------NTKPWEIPAATSGGNMGTSNYNWNWEDIDSLVST 438
             YGE +FK MEEPT+           NT+PWEI A +SG  M  SNY W WEDIDS VST
Sbjct: 217  NYGE-EFKIMEEPTLNSIMPNTSGSTNTQPWEIAATSSG--MEMSNY-WTWEDIDSFVST 272

Query: 437  DLKDPWDDSDIKP 399
            D   PWDDSDIKP
Sbjct: 273  DPNVPWDDSDIKP 285


Top