BLASTX nr result

ID: Glycyrrhiza23_contig00013241 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013241
         (1047 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003541668.1| PREDICTED: transcription factor TCP2-like [G...   126   1e-26
ref|XP_003547199.1| PREDICTED: transcription factor TCP2-like [G...   119   9e-25
ref|XP_002316716.1| predicted protein [Populus trichocarpa] gi|2...   114   4e-23
gb|AET97663.1| TCP transcription factor [Camellia sinensis]           105   1e-20
ref|XP_003524148.1| PREDICTED: transcription factor TCP2-like [G...   105   1e-20

>ref|XP_003541668.1| PREDICTED: transcription factor TCP2-like [Glycine max]
          Length = 532

 Score =  126 bits (316), Expect = 1e-26
 Identities = 104/221 (47%), Positives = 116/221 (52%), Gaps = 46/221 (20%)
 Frame = -2

Query: 1046 NVNHHNHMSQTASFTELLTGGIG-------XXXXXXXXXXXXPNGSVHDQIQGGGGDE-- 894
            +VN++NHMS TASFTELLTGGIG                   PNGS   QI  G   E  
Sbjct: 259  HVNNNNHMSHTASFTELLTGGIGSTVTVNPNTTTTTTTTTTSPNGSSVHQIHDGHDHETN 318

Query: 893  -FNKAR-----HQWSSSTVTPMDYFTSGLL---QSSSRTTHQ------------------ 795
             FNK R     H W S TVTPMDYF++GLL    SSS  T Q                  
Sbjct: 319  LFNKGRQQQQQHHW-SQTVTPMDYFSTGLLVGPSSSSARTQQHQHQSSSAHFQLGHAHAL 377

Query: 794  ----FSGENHSEQLQQHFSFMPEHF--IPPHMVNXXXXXXXXXXXXXXXSDYNLNFTI-- 639
                FSGENHSEQL QHFSFMP+H   IP H V                ++YNLNF+I  
Sbjct: 378  PISPFSGENHSEQL-QHFSFMPDHLNNIPAHHV--VTSSSASHQPNGGDNNYNLNFSIST 434

Query: 638  SSGLAAGYNRGTLQSNI-SPSLLP-HMQRFNSPLDGSPVVP 522
            S+GLA   NRGTLQSN  S S LP H+QRF  PLDGS  +P
Sbjct: 435  STGLAGYNNRGTLQSNSPSSSFLPHHLQRF-QPLDGSSNLP 474


>ref|XP_003547199.1| PREDICTED: transcription factor TCP2-like [Glycine max]
          Length = 511

 Score =  119 bits (299), Expect = 9e-25
 Identities = 96/227 (42%), Positives = 110/227 (48%), Gaps = 52/227 (22%)
 Frame = -2

Query: 1046 NVNHHNH------MSQTASFTELLTGGIGXXXXXXXXXXXXP-------NGSVHDQIQGG 906
            N+ HH+H      MS TASFTELLTGGIG                    NGS   QI  G
Sbjct: 234  NIAHHHHHHNVNNMSHTASFTELLTGGIGSTVTVNPNTTTTTTTTATSPNGSSVHQIHEG 293

Query: 905  GGDE---FNKA--------RHQWSSSTVTPMDYFTSGLL--QSSSRTTHQ---------- 795
               E   FNK          H WS  TVTPMDYF++GLL   SSS +T Q          
Sbjct: 294  HDHEANLFNKGSQQQQQQQHHHWSQ-TVTPMDYFSAGLLVGPSSSASTQQHQSSGQFQLG 352

Query: 794  -------------FSGENHSEQLQQHFSFMPEHF--IPPHMVNXXXXXXXXXXXXXXXSD 660
                         FSGENHSEQ+Q HFSFMP+H   +P    +                +
Sbjct: 353  HGHAHAHALSISPFSGENHSEQMQ-HFSFMPDHLNNMPSSAASASQHSEGDNN------N 405

Query: 659  YNLNFTISSGLAAGYNRGTLQSNI-SPSLLPHMQRFNSPLDGSPVVP 522
            YNLNF+ISS   AGYNRGTLQSN  S S LP +QRF   +DGS  +P
Sbjct: 406  YNLNFSISSSGLAGYNRGTLQSNSPSSSFLPLLQRFQPLVDGSSNLP 452


>ref|XP_002316716.1| predicted protein [Populus trichocarpa] gi|222859781|gb|EEE97328.1|
            predicted protein [Populus trichocarpa]
          Length = 478

 Score =  114 bits (285), Expect = 4e-23
 Identities = 89/203 (43%), Positives = 101/203 (49%), Gaps = 34/203 (16%)
 Frame = -2

Query: 1040 NHHN--HMSQTASFTELLTGGIGXXXXXXXXXXXXPNGSVHDQIQGGGGDEFNKAR--HQ 873
            +HHN   +SQ ++FTELLTGGIG             N S          + F KA    Q
Sbjct: 246  HHHNINPISQNSTFTELLTGGIGSVRNNSSSNNN--NNSTASPTGSDANNLFQKAAAARQ 303

Query: 872  WSSSTVTPMDYFTSGLL-QSSSRTTHQ--------------------------FSGENHS 774
            W SS   PMD F SGLL  SSSR+TH                            SGENH 
Sbjct: 304  WPSS---PMDCFGSGLLGPSSSRSTHHSSGFPGQIQLGNSIPQAMTMSIPPFCVSGENHQ 360

Query: 773  EQLQQHFSFMPEHFIPPHMVNXXXXXXXXXXXXXXXSDYNLNFTISSGLAAGYNRGTLQS 594
            E LQ HF F+ +H IP                     DYNLNFTISSGLAAGY+RGTLQS
Sbjct: 361  EHLQ-HFPFVSDHLIPVAATTQPPASSG---------DYNLNFTISSGLAAGYHRGTLQS 410

Query: 593  N-ISPSLLPHMQRF--NSPLDGS 534
            N  SPSLLPH+QRF  +S +DGS
Sbjct: 411  NSSSPSLLPHLQRFSTSSTIDGS 433


>gb|AET97663.1| TCP transcription factor [Camellia sinensis]
          Length = 459

 Score =  105 bits (263), Expect = 1e-20
 Identities = 85/194 (43%), Positives = 96/194 (49%), Gaps = 26/194 (13%)
 Frame = -2

Query: 1031 NHMSQTASFTELLTGGIGXXXXXXXXXXXXPNGSVHDQIQGGGGDEFNKARHQWSSSTVT 852
            N +SQ+ SFTELLTGGI              NGS  +  Q          R QWSS+   
Sbjct: 246  NPISQS-SFTELLTGGINNVNSATTTASP--NGSAANLFQ-------KSTRPQWSSA--- 292

Query: 851  PMDYFTSGLLQSS-SRTTHQ--FSGE-----------------------NHSEQLQQHFS 750
            PMDYFTSGLL SS SR  H   FSG+                       +H     QHFS
Sbjct: 293  PMDYFTSGLLNSSPSRNPHSSGFSGQIHLGNSLPPSMAISQFSLTADHHHHHHPELQHFS 352

Query: 749  FMPEHFIPPHMVNXXXXXXXXXXXXXXXSDYNLNFTISSGLAAGYNRGTLQSNISPSLLP 570
            F+P+H IP                     DYNLNFTISSG  AG+NRGTLQSN SPSLLP
Sbjct: 353  FVPDHLIPVSTAGVGG-------------DYNLNFTISSGGLAGFNRGTLQSN-SPSLLP 398

Query: 569  HMQRFNSPLDGSPV 528
            H+QR  S +DGS V
Sbjct: 399  HVQRL-STIDGSNV 411


>ref|XP_003524148.1| PREDICTED: transcription factor TCP2-like [Glycine max]
          Length = 478

 Score =  105 bits (263), Expect = 1e-20
 Identities = 93/232 (40%), Positives = 106/232 (45%), Gaps = 61/232 (26%)
 Frame = -2

Query: 1040 NHHNHMSQTASFTELLTGGIGXXXXXXXXXXXXPNGSVHDQIQGGGGDEFNK-------A 882
            +HHN +SQTASFTELLTGGI                   D  +      FNK        
Sbjct: 219  HHHNPVSQTASFTELLTGGIPKGC---------------DDEEPNNMMMFNKEAAAASSG 263

Query: 881  RHQWSSST----VTPMDYFTSGLLQSSSRTT-----------HQFS-------------- 789
            R QW SS+      PMDYF   L  SSSRTT           HQ+S              
Sbjct: 264  RQQWCSSSSAAAAAPMDYF---LGPSSSRTTTTPPHNHHHHHHQYSSSGGFSLAQIQLGH 320

Query: 788  --------------------GENHSE-----QLQQHFSFMPEHFIPPHMVNXXXXXXXXX 684
                                 +NHS      Q QQHFSF+P+H +   + +         
Sbjct: 321  SLPEAMNHNVSAFNNNVSGENQNHSSSDPHLQQQQHFSFIPDHLMSAVVTS-------SS 373

Query: 683  XXXXXXSDYNLNFTISSGLAAGYNRGTLQSNISPSLLPHMQRFNSPLDGSPV 528
                  SDYNLNFT+SSGL AGYNRGTLQSN SPSLLPH+QRF SPLDGS V
Sbjct: 374  HHQPSGSDYNLNFTMSSGL-AGYNRGTLQSN-SPSLLPHLQRF-SPLDGSTV 422


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