BLASTX nr result

ID: Glycyrrhiza23_contig00013216 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013216
         (764 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531210.1| PREDICTED: ribosomal protein S19, mitochondr...   207   2e-51
ref|NP_001237858.1| uncharacterized protein LOC100305608 [Glycin...   204   1e-50
ref|XP_003616878.1| Ribosomal protein S19 [Medicago truncatula] ...   196   6e-48
gb|AFK37007.1| unknown [Medicago truncatula]                          184   2e-44
ref|YP_003587380.1| ribosomal protein S19 [Cucurbita pepo] gi|25...   119   5e-25

>ref|XP_003531210.1| PREDICTED: ribosomal protein S19, mitochondrial-like [Glycine max]
          Length = 127

 Score =  207 bits (527), Expect = 2e-51
 Identities = 102/123 (82%), Positives = 109/123 (88%)
 Frame = -2

Query: 559 MRATAMLRVLNKQFIGIAGDTANVVAKKLPKSPAPVSHKPAFIDAFLYKMKKNRDLLMNK 380
           MR T MLR L KQF+GI GDTAN VAKK P  P  VS KPAFIDAFLYKMKKN +LL+NK
Sbjct: 1   MRPTMMLRALTKQFLGIVGDTANTVAKKPPPPPPLVSRKPAFIDAFLYKMKKNPNLLLNK 60

Query: 379 TIWSRRSTILPEFVDKTVKIYNGKTTVRCKITEGKVGHKFGEFALTRKRKTREQSNAKNV 200
           TIWSRRSTILPEFVD TVKIYNGKTT+RC+ITEGKVGHKFGEFALTRKRKTREQ+N+KNV
Sbjct: 61  TIWSRRSTILPEFVDSTVKIYNGKTTIRCRITEGKVGHKFGEFALTRKRKTREQANSKNV 120

Query: 199 KQL 191
           KQL
Sbjct: 121 KQL 123


>ref|NP_001237858.1| uncharacterized protein LOC100305608 [Glycine max]
           gi|255626065|gb|ACU13377.1| unknown [Glycine max]
          Length = 127

 Score =  204 bits (520), Expect = 1e-50
 Identities = 102/123 (82%), Positives = 107/123 (86%)
 Frame = -2

Query: 559 MRATAMLRVLNKQFIGIAGDTANVVAKKLPKSPAPVSHKPAFIDAFLYKMKKNRDLLMNK 380
           MR T MLR L KQF+GI GD AN VAKK P  P  VS KPAFIDAFLYKMKKN +LL NK
Sbjct: 1   MRPTMMLRALTKQFLGIVGDAANTVAKKPPLPPPLVSRKPAFIDAFLYKMKKNPNLLSNK 60

Query: 379 TIWSRRSTILPEFVDKTVKIYNGKTTVRCKITEGKVGHKFGEFALTRKRKTREQSNAKNV 200
           TIWSRRSTILPEFVD TVKIYNGKTT+RC+ITEGKVGHKFGEFALTRKRKTREQ+NAKNV
Sbjct: 61  TIWSRRSTILPEFVDTTVKIYNGKTTIRCRITEGKVGHKFGEFALTRKRKTREQANAKNV 120

Query: 199 KQL 191
           KQL
Sbjct: 121 KQL 123


>ref|XP_003616878.1| Ribosomal protein S19 [Medicago truncatula]
           gi|355518213|gb|AES99836.1| Ribosomal protein S19
           [Medicago truncatula]
          Length = 246

 Score =  196 bits (497), Expect = 6e-48
 Identities = 101/123 (82%), Positives = 107/123 (86%)
 Frame = -2

Query: 559 MRATAMLRVLNKQFIGIAGDTANVVAKKLPKSPAPVSHKPAFIDAFLYKMKKNRDLLMNK 380
           MR T MLRVLNKQFIGIAGDT N VAKKL  SP  VSHKPAFIDAFLYKMKKN +LL NK
Sbjct: 121 MRPTYMLRVLNKQFIGIAGDTVNAVAKKLTSSPPLVSHKPAFIDAFLYKMKKNPELLKNK 180

Query: 379 TIWSRRSTILPEFVDKTVKIYNGKTTVRCKITEGKVGHKFGEFALTRKRKTREQSNAKNV 200
           +IWSRRSTIL EFVD  VKIYNGKT +RCKITEGKVGHKFGEFALTRKRK+++Q NAK V
Sbjct: 181 SIWSRRSTILLEFVDSHVKIYNGKTFIRCKITEGKVGHKFGEFALTRKRKSKDQPNAK-V 239

Query: 199 KQL 191
           KQL
Sbjct: 240 KQL 242


>gb|AFK37007.1| unknown [Medicago truncatula]
          Length = 127

 Score =  184 bits (467), Expect = 2e-44
 Identities = 97/125 (77%), Positives = 104/125 (83%), Gaps = 2/125 (1%)
 Frame = -2

Query: 559 MRATAMLRVLNKQFIGIAGDTANVVAKKL--PKSPAPVSHKPAFIDAFLYKMKKNRDLLM 386
           MRAT  LRVLNKQF+GIAGD AN V  KL  P  PAP + KPAFIDAFLYKMKKN +LL 
Sbjct: 1   MRATNFLRVLNKQFLGIAGDAANAVTNKLKSPSPPAP-ARKPAFIDAFLYKMKKNPELLK 59

Query: 385 NKTIWSRRSTILPEFVDKTVKIYNGKTTVRCKITEGKVGHKFGEFALTRKRKTREQSNAK 206
           NK IWSRRSTILPEFVD  V+IYNGKT +RCKITEGKVGHKFGEFALTRKRK ++Q NAK
Sbjct: 60  NKQIWSRRSTILPEFVDSHVRIYNGKTFIRCKITEGKVGHKFGEFALTRKRKAKDQPNAK 119

Query: 205 NVKQL 191
            VKQL
Sbjct: 120 -VKQL 123


>ref|YP_003587380.1| ribosomal protein S19 [Cucurbita pepo] gi|259156833|gb|ACV96694.1|
           ribosomal protein S19 [Cucurbita pepo]
          Length = 105

 Score =  119 bits (299), Expect = 5e-25
 Identities = 55/72 (76%), Positives = 65/72 (90%)
 Frame = -2

Query: 445 KPAFIDAFLYKMKKNRDLLMNKTIWSRRSTILPEFVDKTVKIYNGKTTVRCKITEGKVGH 266
           K +F+DAFL +MKK RD L+N+ IWSRRS+ILPEFVD +V+IYNGKT VRCKITEG+VGH
Sbjct: 8   KGSFVDAFLLRMKKKRDPLLNRKIWSRRSSILPEFVDSSVRIYNGKTFVRCKITEGRVGH 67

Query: 265 KFGEFALTRKRK 230
           KFGEFALTRKR+
Sbjct: 68  KFGEFALTRKRR 79


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