BLASTX nr result

ID: Glycyrrhiza23_contig00013178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013178
         (389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003588430.1| Protein cereblon [Medicago truncatula] gi|35...   150   1e-34
ref|XP_003588429.1| Protein cereblon [Medicago truncatula] gi|35...   150   1e-34
ref|XP_003523752.1| PREDICTED: protein cereblon-like [Glycine max]     76   3e-12
ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|2...    73   2e-11
ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|2...    71   8e-11

>ref|XP_003588430.1| Protein cereblon [Medicago truncatula] gi|355477478|gb|AES58681.1|
           Protein cereblon [Medicago truncatula]
          Length = 396

 Score =  150 bits (378), Expect = 1e-34
 Identities = 88/132 (66%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
 Frame = -1

Query: 389 EDIPSRIPRDAFGKLPNLSNLPRNHATPSVLPSKYSV---GFKHXXXXXXXXXXXXXXXX 219
           EDIPSR PRDAFGKL  LSNLP N A  SVLPSKYSV   G  +                
Sbjct: 55  EDIPSRTPRDAFGKLTPLSNLPCNRA--SVLPSKYSVDGQGSLNEESDTEESFENELSST 112

Query: 218 ERRIHQSLIGSGSEHDLINESASSGDDKFTYESDQEMRSNLNDSDTLIPLVPEHEKHAEN 39
           ERRIHQSLI S  E+D   ESASSGDDKFTYESDQE+RSNLN  DTL PL+P+HEK AEN
Sbjct: 113 ERRIHQSLIRSSFEYD---ESASSGDDKFTYESDQEIRSNLNTPDTLTPLLPDHEKDAEN 169

Query: 38  LDSRIGNCSTSG 3
           LDSRIG+CSTSG
Sbjct: 170 LDSRIGSCSTSG 181


>ref|XP_003588429.1| Protein cereblon [Medicago truncatula] gi|355477477|gb|AES58680.1|
           Protein cereblon [Medicago truncatula]
          Length = 556

 Score =  150 bits (378), Expect = 1e-34
 Identities = 88/132 (66%), Positives = 94/132 (71%), Gaps = 3/132 (2%)
 Frame = -1

Query: 389 EDIPSRIPRDAFGKLPNLSNLPRNHATPSVLPSKYSV---GFKHXXXXXXXXXXXXXXXX 219
           EDIPSR PRDAFGKL  LSNLP N A  SVLPSKYSV   G  +                
Sbjct: 215 EDIPSRTPRDAFGKLTPLSNLPCNRA--SVLPSKYSVDGQGSLNEESDTEESFENELSST 272

Query: 218 ERRIHQSLIGSGSEHDLINESASSGDDKFTYESDQEMRSNLNDSDTLIPLVPEHEKHAEN 39
           ERRIHQSLI S  E+D   ESASSGDDKFTYESDQE+RSNLN  DTL PL+P+HEK AEN
Sbjct: 273 ERRIHQSLIRSSFEYD---ESASSGDDKFTYESDQEIRSNLNTPDTLTPLLPDHEKDAEN 329

Query: 38  LDSRIGNCSTSG 3
           LDSRIG+CSTSG
Sbjct: 330 LDSRIGSCSTSG 341


>ref|XP_003523752.1| PREDICTED: protein cereblon-like [Glycine max]
          Length = 543

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 53/137 (38%), Positives = 65/137 (47%), Gaps = 8/137 (5%)
 Frame = -1

Query: 389 EDIPSRIPRDAFGKLPNLSNLPRNHATPSVLPSKYS-VGFKHXXXXXXXXXXXXXXXXE- 216
           ED+P RIPRDAFGK   LSN+P +      L  KYS V  +                 E 
Sbjct: 211 EDLPLRIPRDAFGKSAPLSNMPCSQGVSHNLSPKYSHVNMQRSKNEENDSEPNSEESFES 270

Query: 215 ------RRIHQSLIGSGSEHDLINESASSGDDKFTYESDQEMRSNLNDSDTLIPLVPEHE 54
                 R+IH S++GS   HD ++ESA+  D KF + SDQE+RS                
Sbjct: 271 ELSLMERKIHLSVVGSSYVHDTMDESANDNDVKFMHNSDQEIRS---------------- 314

Query: 53  KHAENLDSRIGNCSTSG 3
               NLDSR G CSTSG
Sbjct: 315 ----NLDSRTGKCSTSG 327


>ref|XP_002324209.1| predicted protein [Populus trichocarpa] gi|222865643|gb|EEF02774.1|
           predicted protein [Populus trichocarpa]
          Length = 542

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 56/132 (42%), Positives = 71/132 (53%), Gaps = 6/132 (4%)
 Frame = -1

Query: 389 EDIPSRIPRDAFGKLPNLSNLPRNHATPSVLPSKYS-VGFKHXXXXXXXXXXXXXXXXE- 216
           ED+P R P+DAFGKL  LSNL R+H   SVLPS +S VG+ H                  
Sbjct: 198 EDMPLRTPKDAFGKLAPLSNL-RSHKFSSVLPSTFSSVGYGHSDNDSEANSEESFETELS 256

Query: 215 ---RRIHQSLIGSGSEHDLINESASSGDDKFTYESDQEMRSNLND-SDTLIPLVPEHEKH 48
              RRIHQS + S   +D+++ES SS DDKF   S +EMRS  +  S+T   L  +  K+
Sbjct: 257 LAERRIHQSALNSCYGYDMMDESMSSDDDKFMSRS-EEMRSRRSHLSETEGSLYLDTGKN 315

Query: 47  AENLDSRIGNCS 12
             N    IGN S
Sbjct: 316 LGNTTLEIGNSS 327


>ref|XP_002308593.1| predicted protein [Populus trichocarpa] gi|222854569|gb|EEE92116.1|
           predicted protein [Populus trichocarpa]
          Length = 549

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 52/131 (39%), Positives = 70/131 (53%), Gaps = 5/131 (3%)
 Frame = -1

Query: 389 EDIPSRIPRDAFGKLPNLSNLPRNHATPSVLPSKYSVGFKH----XXXXXXXXXXXXXXX 222
           EDIP R P+DAFGKL  LSNL R+H    VLP   S+G+ H                   
Sbjct: 188 EDIPLRTPKDAFGKLAPLSNL-RSHRLSRVLP---SLGYGHSDNDSEANSDDSFENALSS 243

Query: 221 XERRIHQSLIGSGSEHDLINESASSGDDKFTYESD-QEMRSNLNDSDTLIPLVPEHEKHA 45
              R HQS + S   +D+++ES SS DDKF  +++ +  RS+LN+S    PL  +  K+A
Sbjct: 244 AGMRTHQSALDSCYGYDVMDESTSSDDDKFLSQTEMRSTRSHLNESKG--PLYSDTGKNA 301

Query: 44  ENLDSRIGNCS 12
           +N    IGN S
Sbjct: 302 DNTTLEIGNSS 312


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