BLASTX nr result

ID: Glycyrrhiza23_contig00013176 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013176
         (1756 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi...   421   e-115
ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi...   380   e-103
ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   371   e-100
ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   367   5e-99
ref|XP_003547238.1| PREDICTED: E3 ubiquitin-protein ligase RING1...   351   3e-94

>ref|XP_003597390.1| RING finger protein [Medicago truncatula] gi|87241270|gb|ABD33128.1|
            Zinc finger, RING-type; Thioredoxin-related [Medicago
            truncatula] gi|355486438|gb|AES67641.1| RING finger
            protein [Medicago truncatula] gi|388498558|gb|AFK37345.1|
            unknown [Medicago truncatula]
          Length = 355

 Score =  421 bits (1082), Expect = e-115
 Identities = 228/366 (62%), Positives = 248/366 (67%), Gaps = 12/366 (3%)
 Frame = -2

Query: 1647 MNSDT--PPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPAVSLFADGLQ 1474
            MNS+T  P ST SFWCYSCTRF+H+L+ ++VVCPHCQ+GFVEEIHAGQSPAVSLFADG+Q
Sbjct: 1    MNSETETPSSTTSFWCYSCTRFIHILNQNNVVCPHCQNGFVEEIHAGQSPAVSLFADGIQ 60

Query: 1473 ASXXXXXXXXXRNAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSHSPFNPVIVLRG 1294
            +S         RNAG                                S SPFNPVIVLRG
Sbjct: 61   SSRRQTSRRRRRNAGG-------------------------------SRSPFNPVIVLRG 89

Query: 1293 PGEDGVAG----------DGEGSGFELYYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQF 1144
            P ED  AG          +G  S FELYY+D +GT LRPLPP+MSE LLGSGFDRLLEQF
Sbjct: 90   PREDTTAGVGADAGGGDSEGNTSSFELYYEDSNGTDLRPLPPSMSELLLGSGFDRLLEQF 149

Query: 1143 SQIEINGFGRVENPPASKAAIESMXXXXXXXXXXXXXTHCAVCKEAFELGSEAREMPCKH 964
            SQIEINGFGR ENPPASKAAIES+              HCAVCKE FELGSEAR+MPC H
Sbjct: 150  SQIEINGFGRSENPPASKAAIESIPTVEITDSEMESEIHCAVCKEQFELGSEARKMPCNH 209

Query: 963  LYHSDCILPWLSMRNSCPVCRHELPSDQNTPETRIAGQIDEEAVGLTIWRLPXXXXXXXX 784
            LYHSDCILPWLSMRNSCPVCRHELPSDQN  E+RI+GQIDEEAVGLTIWRLP        
Sbjct: 210  LYHSDCILPWLSMRNSCPVCRHELPSDQNASESRISGQIDEEAVGLTIWRLPGGGFAVGR 269

Query: 783  XXXXXXXGESQLPVVYTEMDXXXXXXXXXXXXSRRITLAVGGNSNRVRESRGFRRIFRNF 604
                   GE QLP+VYTEMD            SRRI+L VG  SNRVRE RG RRIFRNF
Sbjct: 270  FAGGRRAGEIQLPIVYTEMD-----GNNSNEDSRRISLTVG--SNRVRERRGIRRIFRNF 322

Query: 603  LSFFGS 586
            LSFFG+
Sbjct: 323  LSFFGN 328


>ref|XP_003606705.1| RING finger protein [Medicago truncatula] gi|355507760|gb|AES88902.1|
            RING finger protein [Medicago truncatula]
          Length = 369

 Score =  380 bits (977), Expect = e-103
 Identities = 206/359 (57%), Positives = 234/359 (65%), Gaps = 6/359 (1%)
 Frame = -2

Query: 1647 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSP--AVSLFADGLQ 1474
            MNS++ P T S+WCYSCTRF++L DH  +VCPHC +GFVEEI AG+SP   +S F     
Sbjct: 1    MNSESSPETPSYWCYSCTRFINLSDHTLIVCPHCDNGFVEEIAAGESPHHRLSPFPADTV 60

Query: 1473 ASXXXXXXXXXRNAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSHSPFNPVIVLRG 1294
            +S         R+AGS                                 SPFNPVIVLRG
Sbjct: 61   SSRRQGFRRRRRDAGS--------------------------------RSPFNPVIVLRG 88

Query: 1293 PGEDGVAGDGEGSG---FELYYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQFSQIEING 1123
             G+DGV  DG G+G   FEL+YDDGDG+GLRPLPPT+SEFLLGSGFDRLLEQFSQIE+NG
Sbjct: 89   AGDDGVGEDGAGAGGSAFELFYDDGDGSGLRPLPPTVSEFLLGSGFDRLLEQFSQIEMNG 148

Query: 1122 FGRVENPPASKAAIESMXXXXXXXXXXXXXTHCAVCKEAFELGSEAREMPCKHLYHSDCI 943
            FGR ENPPASKAAIESM              HCAVCKE FEL +EARE+PCKHLYHSDCI
Sbjct: 149  FGRPENPPASKAAIESMPTVEICEEHVSCELHCAVCKEEFELHAEARELPCKHLYHSDCI 208

Query: 942  LPWLSMRNSCPVCRHELPSDQNTP-ETRIAGQIDEEAVGLTIWRLPXXXXXXXXXXXXXX 766
            LPWL++RNSCPVCRHELPSD N P ETR++GQIDEEA+GLTIWRLP              
Sbjct: 209  LPWLTVRNSCPVCRHELPSDLNNPLETRVSGQIDEEAIGLTIWRLPGGGFAVGRFSGGRS 268

Query: 765  XGESQLPVVYTEMDXXXXXXXXXXXXSRRITLAVGGNSNRVRESRGFRRIFRNFLSFFG 589
             GES  PVVYTEMD             RRI+  V   ++RVRES G  R+FRNF SFFG
Sbjct: 269  AGESHFPVVYTEMD--GGLNAAQGSAPRRISRTV--RAHRVRESHGIGRVFRNFFSFFG 323


>ref|XP_003539637.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  371 bits (952), Expect = e-100
 Identities = 206/358 (57%), Positives = 226/358 (63%), Gaps = 5/358 (1%)
 Frame = -2

Query: 1647 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPA----VSLFADG 1480
            MN DT P T S+WCYSCTRFVHL     + CPHCQSGFVEEI AG   +    +S F D 
Sbjct: 1    MNLDTQPGTPSYWCYSCTRFVHLSVQATIACPHCQSGFVEEIRAGAEASPRHRLSPFPDD 60

Query: 1479 LQASXXXXXXXXXRNAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSHSPFNPVIVL 1300
               S         R  G                              A + SPFNPVIVL
Sbjct: 61   -PLSFRRQGFRRRRREG------------------------------AGNRSPFNPVIVL 89

Query: 1299 RGPGEDGVAGDGEG-SGFELYYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQFSQIEING 1123
            RGPG+D  A D +G S FEL+YDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQF+Q+E+NG
Sbjct: 90   RGPGDDSAAADHDGASTFELFYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQFAQMEMNG 149

Query: 1122 FGRVENPPASKAAIESMXXXXXXXXXXXXXTHCAVCKEAFELGSEAREMPCKHLYHSDCI 943
            FGR ENPP SKAAIESM              HCAVCKE FEL +EARE+PCKH+YHS+CI
Sbjct: 150  FGRPENPPTSKAAIESMPTVEIGETHVETDAHCAVCKEVFELHAEARELPCKHIYHSECI 209

Query: 942  LPWLSMRNSCPVCRHELPSDQNTPETRIAGQIDEEAVGLTIWRLPXXXXXXXXXXXXXXX 763
            LPWLSMRNSCPVCRHELPSD    ETR+  QIDEEA+GLTIWRLP               
Sbjct: 210  LPWLSMRNSCPVCRHELPSDL---ETRVPSQIDEEAIGLTIWRLPGGGFAVGRFSGGRRT 266

Query: 762  GESQLPVVYTEMDXXXXXXXXXXXXSRRITLAVGGNSNRVRESRGFRRIFRNFLSFFG 589
            GES LPVVYTEMD             RRI+ +V   SNRVRESRGF R+FRNF SFFG
Sbjct: 267  GESHLPVVYTEMD---GGLNTNGGAPRRISRSV--RSNRVRESRGFGRVFRNFFSFFG 319


>ref|XP_003537982.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 361

 Score =  367 bits (942), Expect = 5e-99
 Identities = 201/354 (56%), Positives = 221/354 (62%), Gaps = 1/354 (0%)
 Frame = -2

Query: 1647 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPAVSLFADGLQAS 1468
            MN +T P TAS+WCYSCTRFVHL     + CPHCQSGFVEEI AG          G +AS
Sbjct: 1    MNLETQPGTASYWCYSCTRFVHLSVQSTIACPHCQSGFVEEIRAGA---------GAEAS 51

Query: 1467 XXXXXXXXXRNAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSHSPFNPVIVLRGPG 1288
                      +                                + + SPFNPVIVLRGPG
Sbjct: 52   PRHRLSPFPDDP----------------LLLRRQGFRRRRREASGNRSPFNPVIVLRGPG 95

Query: 1287 EDGVAGDGEG-SGFELYYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQFSQIEINGFGRV 1111
            +D  A D +G S FEL+YDDGDGTGLRPLPPTMSE LLGSGFDRLLEQF+QIE+NGFGR 
Sbjct: 96   DDSAAADHDGVSTFELFYDDGDGTGLRPLPPTMSELLLGSGFDRLLEQFAQIEMNGFGRP 155

Query: 1110 ENPPASKAAIESMXXXXXXXXXXXXXTHCAVCKEAFELGSEAREMPCKHLYHSDCILPWL 931
            ENPPASKAAIESM              HCAVCKEAFEL +EARE+PCKH+YHSDCILPWL
Sbjct: 156  ENPPASKAAIESMPTVEIGETHVETEAHCAVCKEAFELHAEARELPCKHIYHSDCILPWL 215

Query: 930  SMRNSCPVCRHELPSDQNTPETRIAGQIDEEAVGLTIWRLPXXXXXXXXXXXXXXXGESQ 751
            SMRNSCPVCRHELPSD    ETR+  QIDEE +GLTIWRLP               GES 
Sbjct: 216  SMRNSCPVCRHELPSDL---ETRVPSQIDEETIGLTIWRLPGGGFAVGRFSGGRRTGESH 272

Query: 750  LPVVYTEMDXXXXXXXXXXXXSRRITLAVGGNSNRVRESRGFRRIFRNFLSFFG 589
             PVVYTEMD             RRI+ +V   SNRVRESRGF R+  NF SFFG
Sbjct: 273  FPVVYTEMD---GGLNTNGGAPRRISRSV--RSNRVRESRGFGRVISNFFSFFG 321


>ref|XP_003547238.1| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Glycine max]
          Length = 314

 Score =  351 bits (901), Expect = 3e-94
 Identities = 208/355 (58%), Positives = 219/355 (61%), Gaps = 1/355 (0%)
 Frame = -2

Query: 1647 MNSDTPPSTASFWCYSCTRFVHLLDHHDVVCPHCQSGFVEEIHAGQSPAVSLFADGLQAS 1468
            MNSDT     S+WCYSCTRFVH+ D +DVVCP C  GFVE++ AGQS             
Sbjct: 1    MNSDT----TSYWCYSCTRFVHIHDQNDVVCPRCHGGFVEKVTAGQSARQGF-------- 48

Query: 1467 XXXXXXXXXRNAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXRARSHSPFNPVIVLRGPG 1288
                     RNAGS                                HSPFNPVIVLRGPG
Sbjct: 49   -----RRRRRNAGS--------------------------------HSPFNPVIVLRGPG 71

Query: 1287 EDGVAGDGEGSGFELYYDDGDGTGLRPLPPTMSEFLLGSGFDRLLEQFSQIEINGFGRVE 1108
            ED      E S FELYYD  DG GLRPLP TMSEFLLGSGFDRLLEQ SQIEING GR E
Sbjct: 72   ED------EESSFELYYDGFDGEGLRPLPSTMSEFLLGSGFDRLLEQVSQIEINGLGRPE 125

Query: 1107 NPPASKAAIESMXXXXXXXXXXXXXTHCAVCKEAFELGSEAREMPCKHLYHSDCILPWLS 928
            NPPASKAAIESM             T CAVCKEAFELG  AREMPCKHLYHSDCILPWLS
Sbjct: 126  NPPASKAAIESMPTLEITESHVASETTCAVCKEAFELGELAREMPCKHLYHSDCILPWLS 185

Query: 927  MRNSCPVCRHELPSDQNTPETRIAGQIDEEAVGLTIWRLPXXXXXXXXXXXXXXXGESQL 748
            MRNSCPVCRHELPS+Q  PETR+AGQI+EEAVGLTIWRLP               GES L
Sbjct: 186  MRNSCPVCRHELPSEQAAPETRVAGQIEEEAVGLTIWRLP-----GGGFAVGRFAGESPL 240

Query: 747  PVVYTEMDXXXXXXXXXXXXSRRITLAVGGNSNRVRESR-GFRRIFRNFLSFFGS 586
            PVVYTEM+            SRRI+LAVGG   RVRESR GF RIFRN     G+
Sbjct: 241  PVVYTEME----SGGNSNEGSRRISLAVGG--GRVRESRGGFGRIFRNLFGRIGA 289


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