BLASTX nr result

ID: Glycyrrhiza23_contig00013169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013169
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [M...   218   5e-55
ref|XP_002531123.1| chromodomain helicase DNA binding protein, p...   218   5e-55
ref|XP_002313369.1| chromatin remodeling complex subunit [Populu...   217   7e-55
ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding...   215   3e-54
ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding...   215   3e-54

>ref|XP_003617298.1| Chromodomain-helicase-DNA-binding protein [Medicago truncatula]
            gi|355518633|gb|AET00257.1|
            Chromodomain-helicase-DNA-binding protein [Medicago
            truncatula]
          Length = 1739

 Score =  218 bits (554), Expect = 5e-55
 Identities = 108/110 (98%), Positives = 110/110 (100%)
 Frame = -3

Query: 330  LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMEH 151
            LVILDKLLVRLHETKHRVLIFSQMVRMLDILA+YLSLRGFQFQRLDGSTK+ELRQQAMEH
Sbjct: 935  LVILDKLLVRLHETKHRVLIFSQMVRMLDILAQYLSLRGFQFQRLDGSTKSELRQQAMEH 994

Query: 150  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1
            FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH
Sbjct: 995  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1044


>ref|XP_002531123.1| chromodomain helicase DNA binding protein, putative [Ricinus
            communis] gi|223529287|gb|EEF31257.1| chromodomain
            helicase DNA binding protein, putative [Ricinus communis]
          Length = 1718

 Score =  218 bits (554), Expect = 5e-55
 Identities = 108/110 (98%), Positives = 110/110 (100%)
 Frame = -3

Query: 330  LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMEH 151
            LVILDKLLVRLHETKHRVLIFSQMVR+LDILAEYLSLRGFQFQRLDGSTKAELRQQAM+H
Sbjct: 904  LVILDKLLVRLHETKHRVLIFSQMVRLLDILAEYLSLRGFQFQRLDGSTKAELRQQAMDH 963

Query: 150  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1
            FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH
Sbjct: 964  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1013


>ref|XP_002313369.1| chromatin remodeling complex subunit [Populus trichocarpa]
            gi|222849777|gb|EEE87324.1| chromatin remodeling complex
            subunit [Populus trichocarpa]
          Length = 1748

 Score =  217 bits (553), Expect = 7e-55
 Identities = 107/110 (97%), Positives = 110/110 (100%)
 Frame = -3

Query: 330  LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMEH 151
            LVILDKLLVRLHETKHRVLIFSQMVRMLDI+A+Y+SLRGFQFQRLDGSTKAELRQQAMEH
Sbjct: 926  LVILDKLLVRLHETKHRVLIFSQMVRMLDIIAQYMSLRGFQFQRLDGSTKAELRQQAMEH 985

Query: 150  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1
            FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH
Sbjct: 986  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1035


>ref|XP_003545390.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1764

 Score =  215 bits (548), Expect = 3e-54
 Identities = 106/110 (96%), Positives = 109/110 (99%)
 Frame = -3

Query: 330  LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMEH 151
            LVILDKLLV+LHETKHRVLIFSQMVRMLDIL EY+SLRGFQFQRLDGSTKAELRQQAM+H
Sbjct: 950  LVILDKLLVKLHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDH 1009

Query: 150  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1
            FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH
Sbjct: 1010 FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1059


>ref|XP_003519517.1| PREDICTED: chromodomain-helicase-DNA-binding protein 2-like [Glycine
            max]
          Length = 1767

 Score =  215 bits (548), Expect = 3e-54
 Identities = 106/110 (96%), Positives = 109/110 (99%)
 Frame = -3

Query: 330  LVILDKLLVRLHETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAMEH 151
            LVILDKLLV+LHETKHRVLIFSQMVRMLDIL EY+SLRGFQFQRLDGSTKAELRQQAM+H
Sbjct: 953  LVILDKLLVKLHETKHRVLIFSQMVRMLDILGEYMSLRGFQFQRLDGSTKAELRQQAMDH 1012

Query: 150  FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1
            FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH
Sbjct: 1013 FNAPGSDDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAH 1062


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