BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Glycyrrhiza23_contig00013152
         (330 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E sub...    99   5e-19
ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E sub...    94   1e-17
ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|3555218...    72   5e-11
ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicag...    70   2e-10

>ref|XP_003545837.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2098

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 56/129 (43%), Positives = 74/129 (57%), Gaps = 20/129 (15%)
 Frame = -3

Query: 328  QEDSSKS--WGSNQ--DATKPKSNDWTSWGKNKDDI------------RDGGSK--RDDS 203
            QEDSSKS  W ++   D TK KSN+W++WG NK +I            +DG S+  +++S
Sbjct: 1371 QEDSSKSNPWSTSTIADQTKTKSNEWSAWGSNKSEIPVGWASSNKTEIKDGRSETAQENS 1430

Query: 202  WSYQKLKADVTQEDSSMPSAWGAKK--DTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSW 29
            W        V QEDSS  +AW      D    +SN+WS WG ++++I  GGSK  QEDSW
Sbjct: 1431 WG-----KTVNQEDSSKSNAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAVQEDSW 1485

Query: 28   SSQKWTADV 2
             S KW ADV
Sbjct: 1486 GSSKWKADV 1494



 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 49/111 (44%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
 Frame = -3

Query: 328  QEDSSK--SWGSNQDATKPKSNDWTSWGKNKDDIRDGGSKRDDSWSYQKLKADVTQEDSS 155
            QED+S+  +W +N  A + KSN+W+ WGK K+  ++   +  DSW   K K  VTQED+S
Sbjct: 1694 QEDNSRLGAWDANA-ADQTKSNEWSDWGKKKEVTQEDNVQ--DSWGSGKRKDKVTQEDNS 1750

Query: 154  MPSAWGAKK-DTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSWSSQKWTAD 5
                WGA + D  K +S++WS WGK+K++I  GGS+  Q DSW S K   D
Sbjct: 1751 GSGGWGANRTDLAKSKSSEWSSWGKNKSEIPAGGSENVQNDSWGSGKLEDD 1801



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 49/106 (46%), Positives = 65/106 (61%), Gaps = 7/106 (6%)
 Frame = -3

Query: 328  QEDSSKS--WGSNQ--DATKPKSNDWTSWGKNKDDIRDGGSK--RDDSWSYQKLKADVTQ 167
            QEDSSKS  W ++   D    KSN+W++WG N+ +I  GGSK  ++DSW   K KADV Q
Sbjct: 1437 QEDSSKSNAWNTSTTVDHANTKSNEWSAWGSNQSEIPAGGSKAVQEDSWGSSKWKADVAQ 1496

Query: 166  EDSSMPSAWGAK-KDTTKPESNDWSPWGKSKNDIQDGGSKRAQEDS 32
            ED+S   AW A   D TK  S++WS WGK K+  Q+  S+    D+
Sbjct: 1497 EDNSRLGAWDANAADQTK--SSEWSGWGKKKDVTQEDNSRLGAWDA 1540



 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 51/134 (38%), Positives = 71/134 (52%), Gaps = 26/134 (19%)
 Frame = -3

Query: 328  QEDSSK--SWGSNQDATKPKSNDWTSWGKNKDDIRDGGSK------------RDDSWSYQ 191
            QED+S+  +W +N  A + KSN+W+ WGK K+  ++  S+            + + WS  
Sbjct: 1628 QEDNSRLGAWDANT-ADQTKSNEWSGWGKKKEVTQEDNSRFGAWDANAEDQTKSNEWSGW 1686

Query: 190  KLKADVTQEDSSMPSAWGAK-KDTTKPESNDWSPWGKSK-----NDIQD--GGSKR---- 47
              K DVTQED+S   AW A   D TK  SN+WS WGK K     +++QD  G  KR    
Sbjct: 1687 GKKKDVTQEDNSRLGAWDANAADQTK--SNEWSDWGKKKEVTQEDNVQDSWGSGKRKDKV 1744

Query: 46   AQEDSWSSQKWTAD 5
             QED+  S  W A+
Sbjct: 1745 TQEDNSGSGGWGAN 1758



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
 Frame = -3

Query: 328  QEDSSK--SWGSNQDATKPKSNDWTSWGKNKDDIRDGGSK------------RDDSWSYQ 191
            QED+S+  +W +N  A + KS DW+ WGK KD  ++  S+            +   WS  
Sbjct: 1529 QEDNSRLGAWDANA-ADQTKSRDWSGWGKKKDITQEDNSRLGAWDANAADQTKSSEWSGW 1587

Query: 190  KLKADVTQEDSSMPSAWGAK-KDTTKPESNDWSPWGKSKNDIQDGGSKRAQEDS 32
              K DVTQED+S   AW A   D TK  SN+WS WGK K   Q+  S+    D+
Sbjct: 1588 GKKKDVTQEDNSRLGAWDANTADQTK--SNEWSGWGKKKEVTQEDNSRLGAWDA 1639



 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 40/112 (35%), Positives = 60/112 (53%), Gaps = 15/112 (13%)
 Frame = -3

Query: 319  SSKSWGSNQDATKPKSNDWTSW-GKNKDDIRDGGSKRDDSWSYQKLKADVTQEDSSMPSA 143
            +S  W  + +  + K+N+W+ W   NK +I+DG S+     S+ K    V QEDSS  + 
Sbjct: 1323 TSNGWDVSSNQGESKTNEWSGWASSNKAEIKDGRSEIAPKNSWGK---TVNQEDSSKSNP 1379

Query: 142  WGAK--KDTTKPESNDWSPWGKSKN------------DIQDGGSKRAQEDSW 29
            W      D TK +SN+WS WG +K+            +I+DG S+ AQE+SW
Sbjct: 1380 WSTSTIADQTKTKSNEWSAWGSNKSEIPVGWASSNKTEIKDGRSETAQENSW 1431


>ref|XP_003541591.1| PREDICTED: DNA-directed RNA polymerase E subunit 1-like [Glycine max]
          Length = 2020

 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 52/111 (46%), Positives = 64/111 (57%), Gaps = 6/111 (5%)
 Frame = -3

Query: 328  QEDSSKS--WGSNQ--DATKPKSNDWTSWGKNKDDIRDGGSKRDDSWSYQKLKADVTQED 161
            QEDSSKS  W ++   D TK KSN+W++WG NK +I  GGSK               QED
Sbjct: 1439 QEDSSKSNTWNTSTTADQTKTKSNEWSAWGSNKSEIPAGGSK-------------AVQED 1485

Query: 160  SSMPSAWGAKK--DTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSWSSQKW 14
            SS  +AW      D TK +SN+WS WG +K++I  GGSK  QEDS  S  W
Sbjct: 1486 SSKSNAWNRSTTADQTKTKSNEWSAWGSNKSEIPAGGSKAVQEDSSKSNAW 1536



 Score = 94.0 bits (232), Expect = 1e-17
 Identities = 53/113 (46%), Positives = 64/113 (56%), Gaps = 4/113 (3%)
 Frame = -3

Query: 328  QEDSSKS--WGSNQ--DATKPKSNDWTSWGKNKDDIRDGGSKRDDSWSYQKLKADVTQED 161
            QEDSSKS  W ++   D TK KSN+W++WG NK +I  GGSK               QED
Sbjct: 1527 QEDSSKSNAWNTSTTADQTKTKSNEWSAWGSNKSEIPAGGSK-------------AVQED 1573

Query: 160  SSMPSAWGAKKDTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSWSSQKWTADV 2
            SS         D TK +SN+WS    +K++I  GGSK  QEDSW S KW ADV
Sbjct: 1574 SSKAWNTSTTADQTKTKSNEWSARVSNKSEIPAGGSKAVQEDSWGSSKWKADV 1626



 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 57/124 (45%), Positives = 72/124 (58%), Gaps = 16/124 (12%)
 Frame = -3

Query: 328  QEDSSKSWGSNQ--DATKPKSNDWTSWGKNKDDIRDGGSK--RDDSWSYQKLKADVTQED 161
            QEDSSK+W ++   D TK KSN+W++   NK +I  GGSK  ++DSW   K KADV QED
Sbjct: 1571 QEDSSKAWNTSTTADQTKTKSNEWSARVSNKSEIPAGGSKAVQEDSWGSSKWKADVAQED 1630

Query: 160  SSMPSAWGAK-KDTTKPESNDWSPWGKSKNDIQD-------GGSKR----AQEDSWSSQK 17
            +S   AW A   D TK  SN+WS WGK K+  Q+       G  KR     QED+  S  
Sbjct: 1631 NSRLGAWDANAADQTK--SNEWSGWGKKKDVTQEDNVQHSWGSGKRKDKVTQEDNSGSGD 1688

Query: 16   WTAD 5
            W A+
Sbjct: 1689 WGAN 1692



 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 55/142 (38%), Positives = 70/142 (49%), Gaps = 37/142 (26%)
 Frame = -3

Query: 328  QEDSSKS--WGSNQ--DATKPKSNDWTSWGKNKDDIRDGGSK--RDDS------------ 203
            QEDSSKS  W ++   D TK KSN+W+ WG NK +I  GGSK  ++DS            
Sbjct: 1351 QEDSSKSNAWNTSTTADQTKTKSNEWSDWGSNKSEIPAGGSKAVQEDSSKSNAWNTSTTS 1410

Query: 202  ------------WSYQKLK-----ADVTQEDSSMPSAWGAKK--DTTKPESNDWSPWGKS 80
                        W   K +     +   QEDSS  + W      D TK +SN+WS WG +
Sbjct: 1411 NQTKTKSKEWSAWGSNKSEIPACGSKAVQEDSSKSNTWNTSTTADQTKTKSNEWSAWGSN 1470

Query: 79   KNDIQDGGSKRAQEDSWSSQKW 14
            K++I  GGSK  QEDS  S  W
Sbjct: 1471 KSEIPAGGSKAVQEDSSKSNAW 1492



 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 46/107 (42%), Positives = 63/107 (58%), Gaps = 3/107 (2%)
 Frame = -3

Query: 328  QEDSSK--SWGSNQDATKPKSNDWTSWGKNKDDIRDGGSKRDDSWSYQKLKADVTQEDSS 155
            QED+S+  +W +N  A + KSN+W+ WGK KD  ++   +   SW   K K  VTQED+S
Sbjct: 1628 QEDNSRLGAWDANA-ADQTKSNEWSGWGKKKDVTQEDNVQH--SWGSGKRKDKVTQEDNS 1684

Query: 154  MPSAWGAKK-DTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSWSSQK 17
                WGA + D    +S++WS WGK+K +I  GGS   Q DSW   K
Sbjct: 1685 GSGDWGANRTDLAITKSSEWSSWGKNKTEIPAGGSANVQNDSWGLGK 1731



 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 49/113 (43%), Positives = 69/113 (61%), Gaps = 5/113 (4%)
 Frame = -3

Query: 328  QEDSSKS--WGSNQ-DATKPKSNDWTSWGKNKDDIRDGGSK--RDDSWSYQKLKADVTQE 164
            QED+S S  WG+N+ D    KS++W+SWGKNK +I  GGS   ++DSW   KL  + TQ+
Sbjct: 1680 QEDNSGSGDWGANRTDLAITKSSEWSSWGKNKTEIPAGGSANVQNDSWGLGKL--NDTQK 1737

Query: 163  DSSMPSAWGAKKDTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSWSSQKWTAD 5
            D+S   AWG          N  S W ++K +  DGGS++ QED+W+S  W A+
Sbjct: 1738 DNSGCGAWG---------ENSGSAWVRNKAETIDGGSEKPQEDAWNSGNWKAE 1781



 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 2/104 (1%)
 Frame = -3

Query: 319  SSKSWGSNQDATKPKSNDWTSWGKNKDDIRDGGSKRDDSWSYQKLKADVTQEDSSMPSAW 140
            +S  W  + + T+ K+N+W+ W  +  D R   + +++SW        V QEDSS  +AW
Sbjct: 1307 TSNGWDVSSNQTQSKTNEWSGWASSNKDGRSE-TAQENSWG-----KTVNQEDSSKSNAW 1360

Query: 139  GAKK--DTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSWSSQKW 14
                  D TK +SN+WS WG +K++I  GGSK  QEDS  S  W
Sbjct: 1361 NTSTTADQTKTKSNEWSDWGSNKSEIPAGGSKAVQEDSSKSNAW 1404


>ref|XP_003627850.1| Protein DCL [Medicago truncatula] gi|355521872|gb|AET02326.1|
           Protein DCL [Medicago truncatula]
          Length = 481

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 48/126 (38%), Positives = 67/126 (53%), Gaps = 20/126 (15%)
 Frame = -3

Query: 319 SSKSWGSNQDATKPKSND----------WTSWGKNKDDIRDGGS-KRDDSWSYQKLKA-- 179
           +  +WG    ATK KSND          W +WG +K ++ +G S K  DSW+ QK KA  
Sbjct: 16  NGNAWG----ATKLKSNDIQEDSTNSGGWKAWGSSKPEVHEGESTKVQDSWNSQKWKAAE 71

Query: 178 DVTQEDSSMPSAWGAKKDTTKPESND-WSPWGKSKNDIQDGGSKRAQEDSWSSQ------ 20
           DV+Q+DS   SAWGA    TKP+SND  S WG+ K++I       ++ ++W  +      
Sbjct: 72  DVSQKDSQKSSAWGA----TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKD 127

Query: 19  KWTADV 2
            W A V
Sbjct: 128 SWVAKV 133


>ref|XP_003627838.1| DNA-directed RNA polymerase subunit [Medicago truncatula]
            gi|355521860|gb|AET02314.1| DNA-directed RNA polymerase
            subunit [Medicago truncatula]
          Length = 2032

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 13/122 (10%)
 Frame = -3

Query: 328  QEDSSKSWG---SNQDATKPKSNDWTSWGKNKDDIRDGGS-KRDDSWSYQKLKA--DVTQ 167
            +   +K W    S +D+T   S  W +WG +K ++ +G S K  DSW+ QK KA  DV+Q
Sbjct: 1569 ESGGTKKWKADVSQEDSTN--SGGWKAWGSSKPEVHEGESTKVQDSWNSQKWKAGEDVSQ 1626

Query: 166  EDSSMPSAWGAKKDTTKPESND-WSPWGKSKNDIQDGGSKRAQEDSWSSQ------KWTA 8
            +DS   SAWGA    TKP+SND  S WG+ K++I       ++ ++W  +       W A
Sbjct: 1627 KDSQKSSAWGA----TKPKSNDNRSSWGQKKDEIHVMPEDSSRSNAWEQKPENVKDSWVA 1682

Query: 7    DV 2
             V
Sbjct: 1683 KV 1684



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 38/105 (36%), Positives = 44/105 (41%), Gaps = 3/105 (2%)
 Frame = -3

Query: 319  SSKSWGSNQDAT---KPKSNDWTSWGKNKDDIRDGGSKRDDSWSYQKLKADVTQEDSSMP 149
            +S  W SN+D        SNDW+ WG NK D                L+ DV QEDSS  
Sbjct: 1408 TSNGWDSNKDQIDQPNTNSNDWSGWGPNKSD----------------LQVDVIQEDSSKS 1451

Query: 148  SAWGAKKDTTKPESNDWSPWGKSKNDIQDGGSKRAQEDSWSSQKW 14
            SAWGA   T +      S WGK+            QEDS  S  W
Sbjct: 1452 SAWGAA--TNQKSDQSASAWGKAV----------VQEDSSKSGAW 1484